RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 BFSP1Q12934 665 aa19.25■□□□□ 0.67
RPUSD3-201ENST00000383820 SRSF5Q13243 272 aaKnown RBP19.25■□□□□ 0.67
RPUSD3-201ENST00000383820 ALCAMQ13740 583 aa19.25■□□□□ 0.67
RPUSD3-201ENST00000383820 ZNF268Q14587 947 aaPredicted RBP19.25■□□□□ 0.67
RPUSD3-201ENST00000383820 L1TD1Q5T7N2 865 aaKnown RBP19.25■□□□□ 0.67
RPUSD3-201ENST00000383820 USP49Q70CQ1 688 aa19.25■□□□□ 0.67
RPUSD3-201ENST00000383820 SV2BQ7L1I2 683 aa19.25■□□□□ 0.67
RPUSD3-201ENST00000383820 MON1AQ86VX9 555 aa19.25■□□□□ 0.67
RPUSD3-201ENST00000383820 TMEM86AQ8N2M4 240 aa19.25■□□□□ 0.67
RPUSD3-201ENST00000383820 LRRC52Q8N7C0 313 aa19.25■□□□□ 0.67
RPUSD3-201ENST00000383820 MAB21L3Q8N8X9 362 aa19.25■□□□□ 0.67
RPUSD3-201ENST00000383820 CACTINQ8WUQ7 758 aaKnown RBP19.25■□□□□ 0.67
RPUSD3-201ENST00000383820 USP13Q92995 863 aaPredicted RBP19.25■□□□□ 0.67
RPUSD3-201ENST00000383820 SMG9Q9H0W8 520 aaKnown RBP19.25■□□□□ 0.67
RPUSD3-201ENST00000383820 IKZF4Q9H2S9 585 aa19.25■□□□□ 0.67
RPUSD3-201ENST00000383820 HPS4Q9NQG7 708 aa19.25■□□□□ 0.67
RPUSD3-201ENST00000383820 OLFML3Q9NRN5 406 aa19.25■□□□□ 0.67
RPUSD3-201ENST00000383820 C2orf42Q9NWW7 574 aa19.25■□□□□ 0.67
RPUSD3-201ENST00000383820 UXTQ9UBK9 157 aaPredicted RBP19.25■□□□□ 0.67
RPUSD3-201ENST00000383820 OBSL1O75147 1896 aa19.24■□□□□ 0.67
RPUSD3-201ENST00000383820 RALGAPA1Q6GYQ0 2036 aa19.24■□□□□ 0.67
RPUSD3-201ENST00000383820 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.24■□□□□ 0.67
RPUSD3-201ENST00000383820 HUS1O60921 280 aa19.24■□□□□ 0.67
RPUSD3-201ENST00000383820 PRPF40AO75400 957 aaKnown RBP19.24■□□□□ 0.67
RPUSD3-201ENST00000383820 PDCP20941 246 aa19.24■□□□□ 0.67
RPUSD3-201ENST00000383820 GARTP22102 1010 aa19.24■□□□□ 0.67
RPUSD3-201ENST00000383820 TXLNAP40222 546 aa19.24■□□□□ 0.67
RPUSD3-201ENST00000383820 RPL10AP62906 217 aaKnown RBP19.24■□□□□ 0.67
RPUSD3-201ENST00000383820 TFAMQ00059 246 aaKnown RBP19.24■□□□□ 0.67
RPUSD3-201ENST00000383820 RRAGBQ5VZM2 374 aa19.24■□□□□ 0.67
RPUSD3-201ENST00000383820 PDCL2Q8N4E4 241 aa19.24■□□□□ 0.67
RPUSD3-201ENST00000383820 FAM160A2Q8N612 972 aaPredicted RBP19.24■□□□□ 0.67
RPUSD3-201ENST00000383820 DNAJC19Q96DA6 116 aa19.24■□□□□ 0.67
RPUSD3-201ENST00000383820 TRMT2BQ96GJ1 504 aaKnown RBP19.24■□□□□ 0.67
RPUSD3-201ENST00000383820 LOXL4Q96JB6 756 aa19.24■□□□□ 0.67
RPUSD3-201ENST00000383820 FAM213AQ9BRX8 229 aa19.24■□□□□ 0.67
RPUSD3-201ENST00000383820 PI4K2AQ9BTU6 479 aa19.24■□□□□ 0.67
RPUSD3-201ENST00000383820 TMLHEQ9NVH6 421 aa19.24■□□□□ 0.67
RPUSD3-201ENST00000383820 GDAP2Q9NXN4 497 aa19.24■□□□□ 0.67
RPUSD3-201ENST00000383820 AGAP1Q9UPQ3 857 aa19.24■□□□□ 0.67
RPUSD3-201ENST00000383820 PCDHB13Q9Y5F0 798 aa19.24■□□□□ 0.67
RPUSD3-201ENST00000383820 SRPRBQ9Y5M8 271 aaKnown RBP19.24■□□□□ 0.67
RPUSD3-201ENST00000383820 ZNF638Q14966 1978 aaKnown RBP19.23■□□□□ 0.67
RPUSD3-201ENST00000383820 MYMKA6NI61 221 aa19.23■□□□□ 0.67
RPUSD3-201ENST00000383820 ITGB3P05106 788 aa19.23■□□□□ 0.67
RPUSD3-201ENST00000383820 POLR2BP30876 1174 aaKnown RBP19.23■□□□□ 0.67
RPUSD3-201ENST00000383820 CDR1P51861 262 aa19.23■□□□□ 0.67
RPUSD3-201ENST00000383820 MYL7Q01449 175 aa19.23■□□□□ 0.67
RPUSD3-201ENST00000383820 KCNA1Q09470 495 aa19.23■□□□□ 0.67
RPUSD3-201ENST00000383820 PDGFRLQ15198 375 aa19.23■□□□□ 0.67
RPUSD3-201ENST00000383820 CC2D1AQ6P1N0 951 aaPredicted RBP19.23■□□□□ 0.67
RPUSD3-201ENST00000383820 C1orf127Q8N9H9 656 aa19.23■□□□□ 0.67
RPUSD3-201ENST00000383820 GAB3Q8WWW8 586 aa19.23■□□□□ 0.67
RPUSD3-201ENST00000383820 EXOC4Q96A65 974 aa19.23■□□□□ 0.67
RPUSD3-201ENST00000383820 MYRFLQ96LU7 910 aa19.23■□□□□ 0.67
RPUSD3-201ENST00000383820 RBAKQ9NYW8 714 aaPredicted RBP19.23■□□□□ 0.67
RPUSD3-201ENST00000383820 FBXO2Q9UK22 296 aaPredicted RBP19.23■□□□□ 0.67
RPUSD3-201ENST00000383820 ITGA11Q9UKX5 1188 aa19.23■□□□□ 0.67
RPUSD3-201ENST00000383820 L1RE1Q9UN81 338 aa19.23■□□□□ 0.67
RPUSD3-201ENST00000383820 CCL26Q9Y258 94 aa19.23■□□□□ 0.67
RPUSD3-201ENST00000383820 CLIC4Q9Y696 253 aa19.23■□□□□ 0.67
RPUSD3-201ENST00000383820 VPS37CA5D8V6 355 aaPredicted RBP19.22■□□□□ 0.67
RPUSD3-201ENST00000383820 EXTL3O43909 919 aa19.22■□□□□ 0.67
RPUSD3-201ENST00000383820 NOL4O94818 638 aa19.22■□□□□ 0.67
RPUSD3-201ENST00000383820 GCNT3O95395 438 aa19.22■□□□□ 0.67
RPUSD3-201ENST00000383820 ADRB1P08588 477 aa19.22■□□□□ 0.67
RPUSD3-201ENST00000383820 WNT7BP56706 349 aa19.22■□□□□ 0.67
RPUSD3-201ENST00000383820 INTS6LQ5JSJ4 861 aaKnown RBP19.22■□□□□ 0.67
RPUSD3-201ENST00000383820 TXNDC8Q6A555 127 aa19.22■□□□□ 0.67
RPUSD3-201ENST00000383820 FSTL4Q6MZW2 842 aa19.22■□□□□ 0.67
RPUSD3-201ENST00000383820 CAMKK1Q8N5S9 505 aa19.22■□□□□ 0.67
RPUSD3-201ENST00000383820 DDX1Q92499 740 aaKnown RBP19.22■□□□□ 0.67
RPUSD3-201ENST00000383820 CHFRQ96EP1 664 aa19.22■□□□□ 0.67
RPUSD3-201ENST00000383820 CNTNAP3BQ96NU0 1288 aa19.22■□□□□ 0.67
RPUSD3-201ENST00000383820 PKMYT1Q99640 499 aa19.22■□□□□ 0.67
RPUSD3-201ENST00000383820 CNTNAP3Q9BZ76 1288 aa19.22■□□□□ 0.67
RPUSD3-201ENST00000383820 EBF3Q9H4W6 596 aa19.22■□□□□ 0.67
RPUSD3-201ENST00000383820 DDX43Q9NXZ2 648 aaKnown RBP19.22■□□□□ 0.67
RPUSD3-201ENST00000383820 MAGED2Q9UNF1 606 aaPredicted RBP19.22■□□□□ 0.67
RPUSD3-201ENST00000383820 SLC8A2Q9UPR5 921 aa19.22■□□□□ 0.67
RPUSD3-201ENST00000383820 MORC2Q9Y6X9 1032 aaPredicted RBP19.22■□□□□ 0.67
RPUSD3-201ENST00000383820 OTOL1A6NHN0 477 aaPredicted RBP19.21■□□□□ 0.67
RPUSD3-201ENST00000383820 AKAP3O75969 853 aa19.21■□□□□ 0.67
RPUSD3-201ENST00000383820 DRD1P21728 446 aa19.21■□□□□ 0.67
RPUSD3-201ENST00000383820 PCSK1P29120 753 aa19.21■□□□□ 0.67
RPUSD3-201ENST00000383820 LHX1P48742 406 aa19.21■□□□□ 0.67
RPUSD3-201ENST00000383820 GPR15P49685 360 aa19.21■□□□□ 0.67
RPUSD3-201ENST00000383820 FAM160A1Q05DH4 1040 aa19.21■□□□□ 0.67
RPUSD3-201ENST00000383820 CUL4AQ13619 759 aa19.21■□□□□ 0.67
RPUSD3-201ENST00000383820 CFAP221Q4G0U5 840 aa19.21■□□□□ 0.67
RPUSD3-201ENST00000383820 FBXO43Q4G163 708 aa19.21■□□□□ 0.67
RPUSD3-201ENST00000383820 TRIM68Q6AZZ1 485 aa19.21■□□□□ 0.67
RPUSD3-201ENST00000383820 PKN3Q6P5Z2 889 aa19.21■□□□□ 0.67
RPUSD3-201ENST00000383820 CCDC73Q6ZRK6 1079 aa19.21■□□□□ 0.67
RPUSD3-201ENST00000383820 CACNA2D4Q7Z3S7 1137 aa19.21■□□□□ 0.67
RPUSD3-201ENST00000383820 SYCP3Q8IZU3 236 aa19.21■□□□□ 0.67
RPUSD3-201ENST00000383820 TOP6BLQ8N6T0 577 aa19.21■□□□□ 0.67
RPUSD3-201ENST00000383820 CXorf38Q8TB03 319 aa19.21■□□□□ 0.67
RPUSD3-201ENST00000383820 SAAL1Q96ER3 474 aa19.21■□□□□ 0.67
RPUSD3-201ENST00000383820 FUBP3Q96I24 572 aaKnown RBP eCLIP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms