RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 HUS1O60921 280 aa12.38□□□□□ -0.43
APOBEC3F-202ENST00000381565 MOSPD3O75425 235 aa12.38□□□□□ -0.43
APOBEC3F-202ENST00000381565 SMC2O95347 1197 aa12.38□□□□□ -0.43
APOBEC3F-202ENST00000381565 STAU1O95793 577 aaKnown RBP12.38□□□□□ -0.43
APOBEC3F-202ENST00000381565 C4BPAP04003 597 aaKnown RBP12.38□□□□□ -0.43
APOBEC3F-202ENST00000381565 TRIM49P0CI25 452 aa12.38□□□□□ -0.43
APOBEC3F-202ENST00000381565 TRIM49CP0CI26 452 aa12.38□□□□□ -0.43
APOBEC3F-202ENST00000381565 LAMP2P13473 410 aa12.38□□□□□ -0.43
APOBEC3F-202ENST00000381565 CEBPBP17676 345 aa12.38□□□□□ -0.43
APOBEC3F-202ENST00000381565 ATF6P18850 670 aa12.38□□□□□ -0.43
APOBEC3F-202ENST00000381565 EPHA5P54756 1037 aa12.38□□□□□ -0.43
APOBEC3F-202ENST00000381565 MCCD1P59942 119 aaPredicted RBP12.38□□□□□ -0.43
APOBEC3F-202ENST00000381565 MYL6P60660 151 aa12.38□□□□□ -0.43
APOBEC3F-202ENST00000381565 UBE2HP62256 183 aa12.38□□□□□ -0.43
APOBEC3F-202ENST00000381565 MYO1EQ12965 1108 aa12.38□□□□□ -0.43
APOBEC3F-202ENST00000381565 HTR4Q13639 388 aa12.38□□□□□ -0.43
APOBEC3F-202ENST00000381565 ZACNQ401N2 412 aa12.38□□□□□ -0.43
APOBEC3F-202ENST00000381565 INTS6LQ5JSJ4 861 aaKnown RBP12.38□□□□□ -0.43
APOBEC3F-202ENST00000381565 TMC8Q8IU68 726 aa12.38□□□□□ -0.43
APOBEC3F-202ENST00000381565 NPAS3Q8IXF0 933 aa12.38□□□□□ -0.43
APOBEC3F-202ENST00000381565 ADSSL1Q8N142 457 aa12.38□□□□□ -0.43
APOBEC3F-202ENST00000381565 THEM5Q8N1Q8 247 aa12.38□□□□□ -0.43
APOBEC3F-202ENST00000381565 SPATA18Q8TC71 538 aa12.38□□□□□ -0.43
APOBEC3F-202ENST00000381565 TMC2Q8TDI7 906 aa12.38□□□□□ -0.43
APOBEC3F-202ENST00000381565 RSAD2Q8WXG1 361 aa12.38□□□□□ -0.43
APOBEC3F-202ENST00000381565 ING5Q8WYH8 240 aa12.38□□□□□ -0.43
APOBEC3F-202ENST00000381565 FGF13Q92913 245 aa12.38□□□□□ -0.43
APOBEC3F-202ENST00000381565 ELMO3Q96BJ8 720 aa12.38□□□□□ -0.43
APOBEC3F-202ENST00000381565 TCEAL4Q96EI5 215 aa12.38□□□□□ -0.43
APOBEC3F-202ENST00000381565 EEF2KMTQ96G04 330 aa12.38□□□□□ -0.43
APOBEC3F-202ENST00000381565 LRRC3Q9BY71 257 aa12.38□□□□□ -0.43
APOBEC3F-202ENST00000381565 DDX43Q9NXZ2 648 aaKnown RBP12.38□□□□□ -0.43
APOBEC3F-202ENST00000381565 HSFX1Q9UBD0 423 aa12.38□□□□□ -0.43
APOBEC3F-202ENST00000381565 ANHXE9PGG2 379 aa12.37□□□□□ -0.43
APOBEC3F-202ENST00000381565 PI15O43692 258 aa12.37□□□□□ -0.43
APOBEC3F-202ENST00000381565 PTPN2P17706 415 aa12.37□□□□□ -0.43
APOBEC3F-202ENST00000381565 WARSP23381 471 aaKnown RBP12.37□□□□□ -0.43
APOBEC3F-202ENST00000381565 LMO2P25791 158 aa12.37□□□□□ -0.43
APOBEC3F-202ENST00000381565 FOXK2Q01167 660 aa12.37□□□□□ -0.43
APOBEC3F-202ENST00000381565 PPP3CAQ08209 521 aa12.37□□□□□ -0.43
APOBEC3F-202ENST00000381565 MORC3Q14149 939 aa12.37□□□□□ -0.43
APOBEC3F-202ENST00000381565 ISM2Q6H9L7 571 aa12.37□□□□□ -0.43
APOBEC3F-202ENST00000381565 CLEC17AQ6ZS10 378 aa12.37□□□□□ -0.43
APOBEC3F-202ENST00000381565 DPH6Q7L8W6 267 aa12.37□□□□□ -0.43
APOBEC3F-202ENST00000381565 FAM186BQ8IYM0 893 aa12.37□□□□□ -0.43
APOBEC3F-202ENST00000381565 ST13P5Q8NFI4 369 aaPredicted RBP12.37□□□□□ -0.43
APOBEC3F-202ENST00000381565 ACBD6Q9BR61 282 aa12.37□□□□□ -0.43
APOBEC3F-202ENST00000381565 CORO1BQ9BR76 489 aa12.37□□□□□ -0.43
APOBEC3F-202ENST00000381565 MRPL45Q9BRJ2 306 aaKnown RBP12.37□□□□□ -0.43
APOBEC3F-202ENST00000381565 VRTNQ9H8Y1 702 aa12.37□□□□□ -0.43
APOBEC3F-202ENST00000381565 KCNK12Q9HB15 430 aa12.37□□□□□ -0.43
APOBEC3F-202ENST00000381565 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.37□□□□□ -0.43
APOBEC3F-202ENST00000381565 HOOK1Q9UJC3 728 aaKnown RBP12.37□□□□□ -0.43
APOBEC3F-202ENST00000381565 CDH7Q9ULB5 785 aa12.37□□□□□ -0.43
APOBEC3F-202ENST00000381565 FRMD4BQ9Y2L6 1034 aa12.37□□□□□ -0.43
APOBEC3F-202ENST00000381565 C2orf72A6NCS6 295 aa12.36□□□□□ -0.43
APOBEC3F-202ENST00000381565 NARSO43776 548 aaKnown RBP12.36□□□□□ -0.43
APOBEC3F-202ENST00000381565 ATP2C2O75185 946 aa12.36□□□□□ -0.43
APOBEC3F-202ENST00000381565 ATICP31939 592 aa12.36□□□□□ -0.43
APOBEC3F-202ENST00000381565 CLCN5P51795 746 aa12.36□□□□□ -0.43
APOBEC3F-202ENST00000381565 VAMP7P51809 220 aa12.36□□□□□ -0.43
APOBEC3F-202ENST00000381565 AP3M2P53677 418 aa12.36□□□□□ -0.43
APOBEC3F-202ENST00000381565 PSMC1P62191 440 aaKnown RBP12.36□□□□□ -0.43
APOBEC3F-202ENST00000381565 MYL7Q01449 175 aa12.36□□□□□ -0.43
APOBEC3F-202ENST00000381565 TSPY1Q01534 308 aa12.36□□□□□ -0.43
APOBEC3F-202ENST00000381565 ADAM9Q13443 819 aa12.36□□□□□ -0.43
APOBEC3F-202ENST00000381565 BIRC3Q13489 604 aa12.36□□□□□ -0.43
APOBEC3F-202ENST00000381565 NCOA4Q13772 614 aa12.36□□□□□ -0.43
APOBEC3F-202ENST00000381565 WDR72Q3MJ13 1102 aa12.36□□□□□ -0.43
APOBEC3F-202ENST00000381565 ANKRD40Q6AI12 368 aa12.36□□□□□ -0.43
APOBEC3F-202ENST00000381565 INTS8Q75QN2 995 aaKnown RBP12.36□□□□□ -0.43
APOBEC3F-202ENST00000381565 SV2AQ7L0J3 742 aa12.36□□□□□ -0.43
APOBEC3F-202ENST00000381565 STKLD1Q8NE28 680 aa12.36□□□□□ -0.43
APOBEC3F-202ENST00000381565 SPPL2BQ8TCT7 592 aa12.36□□□□□ -0.43
APOBEC3F-202ENST00000381565 C2orf15Q8WU43 125 aaKnown RBP12.36□□□□□ -0.43
APOBEC3F-202ENST00000381565 FGF14Q92915 247 aa12.36□□□□□ -0.43
APOBEC3F-202ENST00000381565 SEPT5Q99719 369 aaPredicted RBP12.36□□□□□ -0.43
APOBEC3F-202ENST00000381565 LPIN3Q9BQK8 851 aa12.36□□□□□ -0.43
APOBEC3F-202ENST00000381565 SMYD3Q9H7B4 428 aa12.36□□□□□ -0.43
APOBEC3F-202ENST00000381565 ZNF334Q9HCZ1 680 aaPredicted RBP12.36□□□□□ -0.43
APOBEC3F-202ENST00000381565 CRTAC1Q9NQ79 661 aa12.36□□□□□ -0.43
APOBEC3F-202ENST00000381565 ABI2Q9NYB9 513 aaPredicted RBP12.36□□□□□ -0.43
APOBEC3F-202ENST00000381565 IGSF9Q9P2J2 1179 aa12.36□□□□□ -0.43
APOBEC3F-202ENST00000381565 MRPS23Q9Y3D9 190 aaKnown RBP12.36□□□□□ -0.43
APOBEC3F-202ENST00000381565 NUMBLQ9Y6R0 609 aa12.36□□□□□ -0.43
APOBEC3F-202ENST00000381565 MYBPHLA2RUH7 354 aa12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 PPP1R3GB7ZBB8 358 aa12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 BIN1O00499 593 aa12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 IKBKBO14920 756 aa12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 LRRN2O75325 713 aa12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 TACC1O75410 805 aa12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 ASS1P00966 412 aaKnown RBP12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 HLA-DRAP01903 254 aa12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 HAPLN1P10915 354 aaPredicted RBP12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 GJA1P17302 382 aa12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 AOC1P19801 751 aa12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 CCNE1P24864 410 aa12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 RPL13P26373 211 aaKnown RBP12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 PSMC2P35998 433 aaKnown RBP12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 RAP1GAPP47736 663 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms