RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 AFF4Q9UHB7 1163 aaKnown RBP17.28■□□□□ 0.36
SNRPB-201ENST00000381342 C5orf42Q9H799 3197 aa17.28■□□□□ 0.36
SNRPB-201ENST00000381342 BDP1A6H8Y1 2624 aa17.27■□□□□ 0.36
SNRPB-201ENST00000381342 MTMR11A4FU01 709 aa17.27■□□□□ 0.36
SNRPB-201ENST00000381342 C2CD4DB7Z1M9 353 aa17.27■□□□□ 0.36
SNRPB-201ENST00000381342 PMM2O15305 246 aa17.27■□□□□ 0.36
SNRPB-201ENST00000381342 ATP2C2O75185 946 aa17.27■□□□□ 0.36
SNRPB-201ENST00000381342 PDGFRBP09619 1106 aa17.27■□□□□ 0.36
SNRPB-201ENST00000381342 PRKCSHP14314 528 aaPredicted RBP17.27■□□□□ 0.36
SNRPB-201ENST00000381342 ATF2P15336 505 aa17.27■□□□□ 0.36
SNRPB-201ENST00000381342 EEF1GP26641 437 aaKnown RBP17.27■□□□□ 0.36
SNRPB-201ENST00000381342 PCSK1P29120 753 aa17.27■□□□□ 0.36
SNRPB-201ENST00000381342 ZNF165P49910 485 aa17.27■□□□□ 0.36
SNRPB-201ENST00000381342 ZXDAP98168 799 aa17.27■□□□□ 0.36
SNRPB-201ENST00000381342 LRMPQ12912 555 aa17.27■□□□□ 0.36
SNRPB-201ENST00000381342 GPR17Q13304 367 aa17.27■□□□□ 0.36
SNRPB-201ENST00000381342 WDR44Q5JSH3 913 aa17.27■□□□□ 0.36
SNRPB-201ENST00000381342 INTS6LQ5JSJ4 861 aaKnown RBP17.27■□□□□ 0.36
SNRPB-201ENST00000381342 MIIPQ5JXC2 388 aa17.27■□□□□ 0.36
SNRPB-201ENST00000381342 TPGS2Q68CL5 300 aa17.27■□□□□ 0.36
SNRPB-201ENST00000381342 LRRTM3Q86VH5 581 aa17.27■□□□□ 0.36
SNRPB-201ENST00000381342 DHX40Q8IX18 779 aaKnown RBP17.27■□□□□ 0.36
SNRPB-201ENST00000381342 TTC9BQ8N6N2 239 aa17.27■□□□□ 0.36
SNRPB-201ENST00000381342 TATDN2Q93075 761 aa17.27■□□□□ 0.36
SNRPB-201ENST00000381342 PKMYT1Q99640 499 aa17.27■□□□□ 0.36
SNRPB-201ENST00000381342 ARID3AQ99856 593 aa17.27■□□□□ 0.36
SNRPB-201ENST00000381342 ACBD6Q9BR61 282 aa17.27■□□□□ 0.36
SNRPB-201ENST00000381342 CRISPLD1Q9H336 500 aa17.27■□□□□ 0.36
SNRPB-201ENST00000381342 DPEP3Q9H4B8 488 aa17.27■□□□□ 0.36
SNRPB-201ENST00000381342 CYP4F11Q9HBI6 524 aa17.27■□□□□ 0.36
SNRPB-201ENST00000381342 TMLHEQ9NVH6 421 aa17.27■□□□□ 0.36
SNRPB-201ENST00000381342 TAB2Q9NYJ8 693 aa17.27■□□□□ 0.36
SNRPB-201ENST00000381342 GCNT4Q9P109 453 aa17.27■□□□□ 0.36
SNRPB-201ENST00000381342 HMGXB4Q9UGU5 601 aa17.27■□□□□ 0.36
SNRPB-201ENST00000381342 A8MXQ7 604 aa17.26■□□□□ 0.35
SNRPB-201ENST00000381342 PRRG1O14668 218 aa17.26■□□□□ 0.35
SNRPB-201ENST00000381342 P4HA2O15460 535 aa17.26■□□□□ 0.35
SNRPB-201ENST00000381342 ZMYND10O75800 440 aa17.26■□□□□ 0.35
SNRPB-201ENST00000381342 CD58P19256 250 aa17.26■□□□□ 0.35
SNRPB-201ENST00000381342 ELF1P32519 619 aa17.26■□□□□ 0.35
SNRPB-201ENST00000381342 GNL1P36915 607 aaPredicted RBP17.26■□□□□ 0.35
SNRPB-201ENST00000381342 ORC1Q13415 861 aa17.26■□□□□ 0.35
SNRPB-201ENST00000381342 PTPN21Q16825 1174 aa17.26■□□□□ 0.35
SNRPB-201ENST00000381342 PPM1LQ5SGD2 360 aa17.26■□□□□ 0.35
SNRPB-201ENST00000381342 DCP1BQ8IZD4 617 aaKnown RBP17.26■□□□□ 0.35
SNRPB-201ENST00000381342 ZDHHC14Q8IZN3 488 aa17.26■□□□□ 0.35
SNRPB-201ENST00000381342 ATAD1Q8NBU5 361 aa17.26■□□□□ 0.35
SNRPB-201ENST00000381342 LMO3Q8TAP4 145 aa17.26■□□□□ 0.35
SNRPB-201ENST00000381342 LPIN3Q9BQK8 851 aa17.26■□□□□ 0.35
SNRPB-201ENST00000381342 CRACR2AQ9BSW2 395 aa17.26■□□□□ 0.35
SNRPB-201ENST00000381342 RHOBTB2Q9BYZ6 727 aa17.26■□□□□ 0.35
SNRPB-201ENST00000381342 INTS2Q9H0H0 1204 aaKnown RBP17.26■□□□□ 0.35
SNRPB-201ENST00000381342 HSD3B7Q9H2F3 369 aa17.26■□□□□ 0.35
SNRPB-201ENST00000381342 ABI2Q9NYB9 513 aaPredicted RBP17.26■□□□□ 0.35
SNRPB-201ENST00000381342 CDH9Q9ULB4 789 aa17.26■□□□□ 0.35
SNRPB-201ENST00000381342 PES1O00541 588 aaKnown RBP17.25■□□□□ 0.35
SNRPB-201ENST00000381342 GBP2P32456 591 aaPredicted RBP17.25■□□□□ 0.35
SNRPB-201ENST00000381342 NDST1P52848 882 aa17.25■□□□□ 0.35
SNRPB-201ENST00000381342 CETN1Q12798 172 aa17.25■□□□□ 0.35
SNRPB-201ENST00000381342 KRT31Q15323 416 aa17.25■□□□□ 0.35
SNRPB-201ENST00000381342 UVSSAQ2YD98 709 aa17.25■□□□□ 0.35
SNRPB-201ENST00000381342 VWA3BQ502W6 1294 aa17.25■□□□□ 0.35
SNRPB-201ENST00000381342 TRIM67Q6ZTA4 783 aa17.25■□□□□ 0.35
SNRPB-201ENST00000381342 TCEAL8Q8IYN2 117 aa17.25■□□□□ 0.35
SNRPB-201ENST00000381342 ZNF707Q96C28 371 aaPredicted RBP17.25■□□□□ 0.35
SNRPB-201ENST00000381342 NT5C1BQ96P26 610 aa17.25■□□□□ 0.35
SNRPB-201ENST00000381342 PRKD2Q9BZL6 878 aa17.25■□□□□ 0.35
SNRPB-201ENST00000381342 NDST4Q9H3R1 872 aa17.25■□□□□ 0.35
SNRPB-201ENST00000381342 CBX8Q9HC52 389 aa17.25■□□□□ 0.35
SNRPB-201ENST00000381342 C11orf16Q9NQ32 467 aa17.25■□□□□ 0.35
SNRPB-201ENST00000381342 CRTAC1Q9NQ79 661 aa17.25■□□□□ 0.35
SNRPB-201ENST00000381342 LIMD1Q9UGP4 676 aa17.25■□□□□ 0.35
SNRPB-201ENST00000381342 GTF3C4Q9UKN8 822 aa17.25■□□□□ 0.35
SNRPB-201ENST00000381342 SORCS3Q9UPU3 1222 aa17.25■□□□□ 0.35
SNRPB-201ENST00000381342 YIPF1Q9Y548 306 aa17.25■□□□□ 0.35
SNRPB-201ENST00000381342 INSL5Q9Y5Q6 135 aa17.25■□□□□ 0.35
SNRPB-201ENST00000381342 DOCK6Q96HP0 2047 aa17.25■□□□□ 0.35
SNRPB-201ENST00000381342 MYBPHLA2RUH7 354 aa17.24■□□□□ 0.35
SNRPB-201ENST00000381342 CCL16O15467 120 aa17.24■□□□□ 0.35
SNRPB-201ENST00000381342 XYLBO75191 536 aa17.24■□□□□ 0.35
SNRPB-201ENST00000381342 SOAT2O75908 522 aa17.24■□□□□ 0.35
SNRPB-201ENST00000381342 HNRNPA1P09651 372 aaKnown RBP eCLIP17.24■□□□□ 0.35
SNRPB-201ENST00000381342 FAM163BP0C2L3 166 aa17.24■□□□□ 0.35
SNRPB-201ENST00000381342 ZNF18P17022 549 aa17.24■□□□□ 0.35
SNRPB-201ENST00000381342 SIGLEC14Q08ET2 396 aa17.24■□□□□ 0.35
SNRPB-201ENST00000381342 INCA1Q0VD86 236 aa17.24■□□□□ 0.35
SNRPB-201ENST00000381342 DUSP4Q13115 394 aa17.24■□□□□ 0.35
SNRPB-201ENST00000381342 MTMR3Q13615 1198 aa17.24■□□□□ 0.35
SNRPB-201ENST00000381342 CUL2Q13617 745 aa17.24■□□□□ 0.35
SNRPB-201ENST00000381342 IQCB1Q15051 598 aa17.24■□□□□ 0.35
SNRPB-201ENST00000381342 MDH1BQ5I0G3 518 aa17.24■□□□□ 0.35
SNRPB-201ENST00000381342 RTL10Q7L3V2 364 aa17.24■□□□□ 0.35
SNRPB-201ENST00000381342 ARHGEF19Q8IW93 802 aa17.24■□□□□ 0.35
SNRPB-201ENST00000381342 UBALD2Q8IYN6 164 aa17.24■□□□□ 0.35
SNRPB-201ENST00000381342 B3GALNT2Q8NCR0 500 aa17.24■□□□□ 0.35
SNRPB-201ENST00000381342 MYLPFQ96A32 169 aa17.24■□□□□ 0.35
SNRPB-201ENST00000381342 PBXIP1Q96AQ6 731 aa17.24■□□□□ 0.35
SNRPB-201ENST00000381342 TWNKQ96RR1 684 aa17.24■□□□□ 0.35
SNRPB-201ENST00000381342 CYP3A43Q9HB55 503 aa17.24■□□□□ 0.35
SNRPB-201ENST00000381342 WDR6Q9NNW5 1121 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms