RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 KBTBD6Q86V97 674 aa17.24■□□□□ 0.35
VCX3A-201ENST00000381089 CPA6Q8N4T0 437 aa17.24■□□□□ 0.35
VCX3A-201ENST00000381089 KRI1Q8N9T8 703 aaKnown RBP17.24■□□□□ 0.35
VCX3A-201ENST00000381089 RAD54LQ92698 747 aa17.24■□□□□ 0.35
VCX3A-201ENST00000381089 USP13Q92995 863 aaPredicted RBP17.24■□□□□ 0.35
VCX3A-201ENST00000381089 MAGED2Q9UNF1 606 aaPredicted RBP17.24■□□□□ 0.35
VCX3A-201ENST00000381089 SCN1AP35498 2009 aa17.24■□□□□ 0.35
VCX3A-201ENST00000381089 CNOT1A5YKK6 2376 aaKnown RBP17.24■□□□□ 0.35
VCX3A-201ENST00000381089 ZNF638Q14966 1978 aaKnown RBP17.24■□□□□ 0.35
VCX3A-201ENST00000381089 SDK1Q7Z5N4 2213 aa17.23■□□□□ 0.35
VCX3A-201ENST00000381089 RNF40O75150 1001 aa17.23■□□□□ 0.35
VCX3A-201ENST00000381089 PRPF40AO75400 957 aaKnown RBP17.23■□□□□ 0.35
VCX3A-201ENST00000381089 PLCG1P19174 1290 aa17.23■□□□□ 0.35
VCX3A-201ENST00000381089 NMT1P30419 496 aaKnown RBP17.23■□□□□ 0.35
VCX3A-201ENST00000381089 LONP1P36776 959 aaKnown RBP17.23■□□□□ 0.35
VCX3A-201ENST00000381089 CDR1P51861 262 aa17.23■□□□□ 0.35
VCX3A-201ENST00000381089 RPL10AP62906 217 aaKnown RBP17.23■□□□□ 0.35
VCX3A-201ENST00000381089 MCM6Q14566 821 aa17.23■□□□□ 0.35
VCX3A-201ENST00000381089 ZNF268Q14587 947 aaPredicted RBP17.23■□□□□ 0.35
VCX3A-201ENST00000381089 KARSQ15046 597 aaKnown RBP17.23■□□□□ 0.35
VCX3A-201ENST00000381089 TRIM68Q6AZZ1 485 aa17.23■□□□□ 0.35
VCX3A-201ENST00000381089 LRRTM3Q86VH5 581 aa17.23■□□□□ 0.35
VCX3A-201ENST00000381089 CCDC26Q8TAB7 109 aa17.23■□□□□ 0.35
VCX3A-201ENST00000381089 POMGNT1Q8WZA1 660 aa17.23■□□□□ 0.35
VCX3A-201ENST00000381089 LARP4BQ92615 738 aaKnown RBP17.23■□□□□ 0.35
VCX3A-201ENST00000381089 HVCN1Q96D96 273 aa17.23■□□□□ 0.35
VCX3A-201ENST00000381089 ST6GALNAC4Q9H4F1 302 aa17.23■□□□□ 0.35
VCX3A-201ENST00000381089 HPS4Q9NQG7 708 aa17.23■□□□□ 0.35
VCX3A-201ENST00000381089 ANKRD63C9JTQ0 380 aa17.22■□□□□ 0.35
VCX3A-201ENST00000381089 TULP1O00294 542 aaPredicted RBP17.22■□□□□ 0.35
VCX3A-201ENST00000381089 F11P03951 625 aa17.22■□□□□ 0.35
VCX3A-201ENST00000381089 MPLP40238 635 aa17.22■□□□□ 0.35
VCX3A-201ENST00000381089 RABEP1Q15276 862 aa17.22■□□□□ 0.35
VCX3A-201ENST00000381089 ELF2Q15723 593 aa17.22■□□□□ 0.35
VCX3A-201ENST00000381089 CCDC6Q16204 474 aa17.22■□□□□ 0.35
VCX3A-201ENST00000381089 STPG1Q5TH74 334 aa17.22■□□□□ 0.35
VCX3A-201ENST00000381089 TXNDC8Q6A555 127 aa17.22■□□□□ 0.35
VCX3A-201ENST00000381089 PKN3Q6P5Z2 889 aa17.22■□□□□ 0.35
VCX3A-201ENST00000381089 MON1AQ86VX9 555 aa17.22■□□□□ 0.35
VCX3A-201ENST00000381089 ACDQ96AP0 544 aa17.22■□□□□ 0.35
VCX3A-201ENST00000381089 ZC3H10Q96K80 434 aaKnown RBP17.22■□□□□ 0.35
VCX3A-201ENST00000381089 KIF2CQ99661 725 aa17.22■□□□□ 0.35
VCX3A-201ENST00000381089 P2RY13Q9BPV8 354 aa17.22■□□□□ 0.35
VCX3A-201ENST00000381089 VPS45Q9NRW7 570 aa17.22■□□□□ 0.35
VCX3A-201ENST00000381089 BLOC1S4Q9NUP1 217 aa17.22■□□□□ 0.35
VCX3A-201ENST00000381089 EXOC7Q9UPT5 735 aa17.22■□□□□ 0.35
VCX3A-201ENST00000381089 CCL26Q9Y258 94 aa17.22■□□□□ 0.35
VCX3A-201ENST00000381089 STYXL1Q9Y6J8 313 aa17.22■□□□□ 0.35
VCX3A-201ENST00000381089 HUS1O60921 280 aa17.21■□□□□ 0.35
VCX3A-201ENST00000381089 RHOBTB1O94844 696 aa17.21■□□□□ 0.35
VCX3A-201ENST00000381089 EGFP01133 1207 aa17.21■□□□□ 0.35
VCX3A-201ENST00000381089 HMGA1P17096 107 aaKnown RBP17.21■□□□□ 0.35
VCX3A-201ENST00000381089 GJB2P29033 226 aa17.21■□□□□ 0.35
VCX3A-201ENST00000381089 MYL7Q01449 175 aa17.21■□□□□ 0.35
VCX3A-201ENST00000381089 FAM160A1Q05DH4 1040 aa17.21■□□□□ 0.35
VCX3A-201ENST00000381089 ZC2HC1CQ53FD0 456 aaPredicted RBP17.21■□□□□ 0.35
VCX3A-201ENST00000381089 TMEM150AQ86TG1 271 aa17.21■□□□□ 0.35
VCX3A-201ENST00000381089 CACTINQ8WUQ7 758 aaKnown RBP17.21■□□□□ 0.35
VCX3A-201ENST00000381089 LEO1Q8WVC0 666 aaPredicted RBP17.21■□□□□ 0.35
VCX3A-201ENST00000381089 FIZ1Q96SL8 496 aa17.21■□□□□ 0.35
VCX3A-201ENST00000381089 PI4K2AQ9BTU6 479 aa17.21■□□□□ 0.35
VCX3A-201ENST00000381089 ABCB6Q9NP58 842 aa17.21■□□□□ 0.35
VCX3A-201ENST00000381089 DENND4CQ5VZ89 1909 aa17.21■□□□□ 0.35
VCX3A-201ENST00000381089 TRAV19A0A0A6YYK7 116 aa17.2■□□□□ 0.34
VCX3A-201ENST00000381089 APBB3O95704 486 aa17.2■□□□□ 0.34
VCX3A-201ENST00000381089 USP17L7P0C7H9 530 aa17.2■□□□□ 0.34
VCX3A-201ENST00000381089 ARSAP15289 507 aa17.2■□□□□ 0.34
VCX3A-201ENST00000381089 HOXC13P31276 330 aa17.2■□□□□ 0.34
VCX3A-201ENST00000381089 IFNAR2P48551 515 aa17.2■□□□□ 0.34
VCX3A-201ENST00000381089 GALK1P51570 392 aa17.2■□□□□ 0.34
VCX3A-201ENST00000381089 TFAMQ00059 246 aaKnown RBP17.2■□□□□ 0.34
VCX3A-201ENST00000381089 NR1H3Q13133 447 aa17.2■□□□□ 0.34
VCX3A-201ENST00000381089 MTF1Q14872 753 aa17.2■□□□□ 0.34
VCX3A-201ENST00000381089 PLA2G2CQ5R387 149 aa17.2■□□□□ 0.34
VCX3A-201ENST00000381089 N4BP2L1Q5TBK1 243 aaPredicted RBP17.2■□□□□ 0.34
VCX3A-201ENST00000381089 RNF43Q68DV7 783 aa17.2■□□□□ 0.34
VCX3A-201ENST00000381089 SYT13Q7L8C5 426 aa17.2■□□□□ 0.34
VCX3A-201ENST00000381089 EFCAB13Q8IY85 973 aa17.2■□□□□ 0.34
VCX3A-201ENST00000381089 TMEM86AQ8N2M4 240 aa17.2■□□□□ 0.34
VCX3A-201ENST00000381089 FSIP1Q8NA03 581 aa17.2■□□□□ 0.34
VCX3A-201ENST00000381089 TTC16Q8NEE8 873 aa17.2■□□□□ 0.34
VCX3A-201ENST00000381089 OSCP1Q8WVF1 389 aa17.2■□□□□ 0.34
VCX3A-201ENST00000381089 ATP2A3Q93084 1043 aa17.2■□□□□ 0.34
VCX3A-201ENST00000381089 TRMT2BQ96GJ1 504 aaKnown RBP17.2■□□□□ 0.34
VCX3A-201ENST00000381089 HHIPQ96QV1 700 aa17.2■□□□□ 0.34
VCX3A-201ENST00000381089 ACBD6Q9BR61 282 aa17.2■□□□□ 0.34
VCX3A-201ENST00000381089 BACH2Q9BYV9 841 aa17.2■□□□□ 0.34
VCX3A-201ENST00000381089 TMEM206Q9H813 350 aa17.2■□□□□ 0.34
VCX3A-201ENST00000381089 TRPC7Q9HCX4 862 aa17.2■□□□□ 0.34
VCX3A-201ENST00000381089 DUS2Q9NX74 493 aaKnown RBP17.2■□□□□ 0.34
VCX3A-201ENST00000381089 R3HCC1Q9Y3T6 440 aaKnown RBP17.2■□□□□ 0.34
VCX3A-201ENST00000381089 OTOL1A6NHN0 477 aaPredicted RBP17.19■□□□□ 0.34
VCX3A-201ENST00000381089 TISP43B9A030 160 aa17.19■□□□□ 0.34
VCX3A-201ENST00000381089 LDHAP00338 332 aaKnown RBP17.19■□□□□ 0.34
VCX3A-201ENST00000381089 CKMP06732 381 aa17.19■□□□□ 0.34
VCX3A-201ENST00000381089 PMLP29590 882 aa17.19■□□□□ 0.34
VCX3A-201ENST00000381089 POLR2BP30876 1174 aaKnown RBP17.19■□□□□ 0.34
VCX3A-201ENST00000381089 GJA4P35212 333 aa17.19■□□□□ 0.34
VCX3A-201ENST00000381089 DDIT3P35638 169 aa17.19■□□□□ 0.34
VCX3A-201ENST00000381089 PDE6CP51160 858 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms