RNA–Protein interactions for RNA: ENST00000381018.7

TRIM23-203, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-203ENST00000381018 CCDC91Q7Z6B0 441 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 PCGF5Q86SE9 256 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 NCAPG2Q86XI2 1143 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 LRRC71Q8N4P6 559 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 SLC35B2Q8TB61 432 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 TMEM121Q9BTD3 319 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 FRMD8P1Q9BZ68 369 aaPredicted RBP12.55□□□□□ -0.4
TRIM23-203ENST00000381018 XYLT2Q9H1B5 865 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 PRKAG3Q9UGI9 489 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 C3orf70A6NLC5 250 aaPredicted RBP12.55□□□□□ -0.4
TRIM23-203ENST00000381018 SIGLEC16A6NMB1 481 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 GOLGA8SH3BPF8 625 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 ALOX15BO15296 676 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 PRPF4O43172 522 aaKnown RBP eCLIP12.55□□□□□ -0.4
TRIM23-203ENST00000381018 B4GALT4O60513 344 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 ZBTB7AO95365 584 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 IFNB1P01574 187 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 KRT3P12035 628 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 CD19P15391 556 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 TAC1P20366 129 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 PROZP22891 400 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 SLC8A1P32418 973 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 NCALDP61601 193 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 PDIA2Q13087 525 aaKnown RBP12.55□□□□□ -0.4
TRIM23-203ENST00000381018 HIF1AQ16665 826 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 HADHQ16836 314 aaKnown RBP12.55□□□□□ -0.4
TRIM23-203ENST00000381018 LY6KQ17RY6 165 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 PTPN20Q4JDL3 420 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 ATF7IP2Q5U623 682 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 DENND1BQ6P3S1 775 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 TSHZ1Q6ZSZ6 1077 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 EEPD1Q7L9B9 569 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 ZBED8Q8IZ13 594 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 TTC13Q8NBP0 860 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 PRCCQ92733 491 aaPredicted RBP12.55□□□□□ -0.4
TRIM23-203ENST00000381018 MPHOSPH6Q99547 160 aaKnown RBP12.55□□□□□ -0.4
TRIM23-203ENST00000381018 SPATC1LQ9H0A9 340 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 LHX5Q9H2C1 402 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 TRABDQ9H4I3 376 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 ECT2Q9H8V3 914 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 RXFP1Q9HBX9 757 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 KLHL14Q9P2G3 628 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 PPP1R1BQ9UD71 204 aaPredicted RBP12.55□□□□□ -0.4
TRIM23-203ENST00000381018 GGT7Q9UJ14 662 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 AGAP1Q9UPQ3 857 aa12.55□□□□□ -0.4
TRIM23-203ENST00000381018 SMG5Q9UPR3 1016 aaKnown RBP12.55□□□□□ -0.4
TRIM23-203ENST00000381018 PAPPA2Q9BXP8 1791 aa12.54□□□□□ -0.4
TRIM23-203ENST00000381018 IGKV6-21A0A0C4DH24 114 aa12.54□□□□□ -0.4
TRIM23-203ENST00000381018 NOP56O00567 594 aaKnown RBP12.54□□□□□ -0.4
TRIM23-203ENST00000381018 SPAG7O75391 227 aa12.54□□□□□ -0.4
TRIM23-203ENST00000381018 LGR5O75473 907 aa12.54□□□□□ -0.4
TRIM23-203ENST00000381018 ATP6V1G2O95670 118 aa12.54□□□□□ -0.4
TRIM23-203ENST00000381018 KRT15P19012 456 aa12.54□□□□□ -0.4
TRIM23-203ENST00000381018 HOXD11P31277 338 aaPredicted RBP12.54□□□□□ -0.4
TRIM23-203ENST00000381018 FOXN2P32314 431 aa12.54□□□□□ -0.4
TRIM23-203ENST00000381018 RFC1P35251 1148 aaPredicted RBP12.54□□□□□ -0.4
TRIM23-203ENST00000381018 SLC18A1P54219 525 aa12.54□□□□□ -0.4
TRIM23-203ENST00000381018 WDR4P57081 412 aaKnown RBP12.54□□□□□ -0.4
TRIM23-203ENST00000381018 SLC25A11Q02978 314 aaKnown RBP12.54□□□□□ -0.4
TRIM23-203ENST00000381018 BNIP1Q12981 228 aa12.54□□□□□ -0.4
TRIM23-203ENST00000381018 ACVR2BQ13705 512 aa12.54□□□□□ -0.4
TRIM23-203ENST00000381018 VGLL4Q14135 290 aa12.54□□□□□ -0.4
TRIM23-203ENST00000381018 TFDP1Q14186 410 aa12.54□□□□□ -0.4
TRIM23-203ENST00000381018 SPARCL1Q14515 664 aa12.54□□□□□ -0.4
TRIM23-203ENST00000381018 RASA2Q15283 850 aa12.54□□□□□ -0.4
TRIM23-203ENST00000381018 TMEM132AQ24JP5 1023 aa12.54□□□□□ -0.4
TRIM23-203ENST00000381018 HP1BP3Q5SSJ5 553 aaPredicted RBP12.54□□□□□ -0.4
TRIM23-203ENST00000381018 RNF43Q68DV7 783 aa12.54□□□□□ -0.4
TRIM23-203ENST00000381018 CGB2Q6NT52 195 aa12.54□□□□□ -0.4
TRIM23-203ENST00000381018 BBS12Q6ZW61 710 aa12.54□□□□□ -0.4
TRIM23-203ENST00000381018 TBC1D1Q86TI0 1168 aaPredicted RBP12.54□□□□□ -0.4
TRIM23-203ENST00000381018 FAM228AQ86W67 206 aa12.54□□□□□ -0.4
TRIM23-203ENST00000381018 RHPN2Q8IUC4 686 aa12.54□□□□□ -0.4
TRIM23-203ENST00000381018 THNSL1Q8IYQ7 743 aa12.54□□□□□ -0.4
TRIM23-203ENST00000381018 FNIP1Q8TF40 1166 aa12.54□□□□□ -0.4
TRIM23-203ENST00000381018 SMC6Q96SB8 1091 aa12.54□□□□□ -0.4
TRIM23-203ENST00000381018 GPR20Q99678 358 aa12.54□□□□□ -0.4
TRIM23-203ENST00000381018 PAIP2Q9BPZ3 127 aaKnown RBP12.54□□□□□ -0.4
TRIM23-203ENST00000381018 PHACTR1Q9C0D0 580 aa12.54□□□□□ -0.4
TRIM23-203ENST00000381018 ZWILCHQ9H900 591 aa12.54□□□□□ -0.4
TRIM23-203ENST00000381018 NXF1Q9UBU9 619 aaKnown RBP12.54□□□□□ -0.4
TRIM23-203ENST00000381018 SLC24A2Q9UI40 661 aa12.54□□□□□ -0.4
TRIM23-203ENST00000381018 POLIQ9UNA4 740 aa12.54□□□□□ -0.4
TRIM23-203ENST00000381018 SNCAIPQ9Y6H5 919 aa12.54□□□□□ -0.4
TRIM23-203ENST00000381018 ZBTB42B2RXF5 422 aa12.53□□□□□ -0.4
TRIM23-203ENST00000381018 ACKR2O00590 384 aa12.53□□□□□ -0.4
TRIM23-203ENST00000381018 LRCH4O75427 683 aa12.53□□□□□ -0.4
TRIM23-203ENST00000381018 USP2O75604 605 aaPredicted RBP12.53□□□□□ -0.4
TRIM23-203ENST00000381018 IL18RAPO95256 599 aa12.53□□□□□ -0.4
TRIM23-203ENST00000381018 ASMTLO95671 621 aa12.53□□□□□ -0.4
TRIM23-203ENST00000381018 CTCFP49711 727 aaPredicted RBP12.53□□□□□ -0.4
TRIM23-203ENST00000381018 PSMC1P62191 440 aaKnown RBP12.53□□□□□ -0.4
TRIM23-203ENST00000381018 DYNLT1P63172 113 aa12.53□□□□□ -0.4
TRIM23-203ENST00000381018 OTUD4Q01804 1114 aaKnown RBP12.53□□□□□ -0.4
TRIM23-203ENST00000381018 PKN2Q16513 984 aaKnown RBP12.53□□□□□ -0.4
TRIM23-203ENST00000381018 SMTNL2Q2TAL5 461 aa12.53□□□□□ -0.4
TRIM23-203ENST00000381018 PREPLQ4J6C6 727 aaPredicted RBP12.53□□□□□ -0.4
TRIM23-203ENST00000381018 ZNF667Q5HYK9 610 aa12.53□□□□□ -0.4
TRIM23-203ENST00000381018 PLPPR4Q7Z2D5 763 aa12.53□□□□□ -0.4
TRIM23-203ENST00000381018 TRIM50Q86XT4 487 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms