RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 TXNDC8Q6A555 127 aa24.88■■□□□ 1.57
U2AF1-202ENST00000380276 PKN3Q6P5Z2 889 aa24.88■■□□□ 1.57
U2AF1-202ENST00000380276 CRELD2Q6UXH1 353 aaPredicted RBP24.88■■□□□ 1.57
U2AF1-202ENST00000380276 ZNF720Q7Z2F6 126 aa24.88■■□□□ 1.57
U2AF1-202ENST00000380276 USP13Q92995 863 aaPredicted RBP24.88■■□□□ 1.57
U2AF1-202ENST00000380276 HVCN1Q96D96 273 aa24.88■■□□□ 1.57
U2AF1-202ENST00000380276 SAAL1Q96ER3 474 aa24.88■■□□□ 1.57
U2AF1-202ENST00000380276 EPSTI1Q96J88 318 aa24.88■■□□□ 1.57
U2AF1-202ENST00000380276 CCSER1Q9C0I3 900 aa24.88■■□□□ 1.57
U2AF1-202ENST00000380276 ST6GALNAC4Q9H4F1 302 aa24.88■■□□□ 1.57
U2AF1-202ENST00000380276 TDP1Q9NUW8 608 aa24.88■■□□□ 1.57
U2AF1-202ENST00000380276 AGAP1Q9UPQ3 857 aa24.88■■□□□ 1.57
U2AF1-202ENST00000380276 STYXL1Q9Y6J8 313 aa24.88■■□□□ 1.57
U2AF1-202ENST00000380276 RALGAPA1Q6GYQ0 2036 aa24.88■■□□□ 1.57
U2AF1-202ENST00000380276 HUS1O60921 280 aa24.87■■□□□ 1.57
U2AF1-202ENST00000380276 GCNT3O95395 438 aa24.87■■□□□ 1.57
U2AF1-202ENST00000380276 F11P03951 625 aa24.87■■□□□ 1.57
U2AF1-202ENST00000380276 ITGB3P05106 788 aa24.87■■□□□ 1.57
U2AF1-202ENST00000380276 CSH1P0DML2 217 aa24.87■■□□□ 1.57
U2AF1-202ENST00000380276 CSH2P0DML3 217 aa24.87■■□□□ 1.57
U2AF1-202ENST00000380276 CCDC6Q16204 474 aa24.87■■□□□ 1.57
U2AF1-202ENST00000380276 C12orf50Q8NA57 414 aaPredicted RBP24.87■■□□□ 1.57
U2AF1-202ENST00000380276 ACCSQ96QU6 501 aa24.87■■□□□ 1.57
U2AF1-202ENST00000380276 KIF9Q9HAQ2 790 aa24.87■■□□□ 1.57
U2AF1-202ENST00000380276 TRPC7Q9HCX4 862 aa24.87■■□□□ 1.57
U2AF1-202ENST00000380276 HPS4Q9NQG7 708 aa24.87■■□□□ 1.57
U2AF1-202ENST00000380276 NCOR2Q9Y618 2525 aa24.87■■□□□ 1.57
U2AF1-202ENST00000380276 ZNF638Q14966 1978 aaKnown RBP24.86■■□□□ 1.57
U2AF1-202ENST00000380276 ATG13O75143 517 aa24.86■■□□□ 1.57
U2AF1-202ENST00000380276 RPP40O75818 363 aaKnown RBP24.86■■□□□ 1.57
U2AF1-202ENST00000380276 ADRB1P08588 477 aa24.86■■□□□ 1.57
U2AF1-202ENST00000380276 KRT19P08727 400 aa24.86■■□□□ 1.57
U2AF1-202ENST00000380276 ARSAP15289 507 aa24.86■■□□□ 1.57
U2AF1-202ENST00000380276 HMGA1P17096 107 aaKnown RBP24.86■■□□□ 1.57
U2AF1-202ENST00000380276 ACAT1P24752 427 aaKnown RBP24.86■■□□□ 1.57
U2AF1-202ENST00000380276 AMPD2Q01433 879 aa24.86■■□□□ 1.57
U2AF1-202ENST00000380276 NFE2Q16621 373 aaPredicted RBP24.86■■□□□ 1.57
U2AF1-202ENST00000380276 DDR2Q16832 855 aa24.86■■□□□ 1.57
U2AF1-202ENST00000380276 IL31Q6EBC2 164 aa24.86■■□□□ 1.57
U2AF1-202ENST00000380276 FSTL4Q6MZW2 842 aa24.86■■□□□ 1.57
U2AF1-202ENST00000380276 USP49Q70CQ1 688 aa24.86■■□□□ 1.57
U2AF1-202ENST00000380276 TMEM150AQ86TG1 271 aa24.86■■□□□ 1.57
U2AF1-202ENST00000380276 NT5DC4Q86YG4 428 aa24.86■■□□□ 1.57
U2AF1-202ENST00000380276 SYCP3Q8IZU3 236 aa24.86■■□□□ 1.57
U2AF1-202ENST00000380276 PDCL2Q8N4E4 241 aa24.86■■□□□ 1.57
U2AF1-202ENST00000380276 FAM83CQ9BQN1 747 aa24.86■■□□□ 1.57
U2AF1-202ENST00000380276 ARRDC1-AS1Q9H2J1 176 aa24.86■■□□□ 1.57
U2AF1-202ENST00000380276 DDX43Q9NXZ2 648 aaKnown RBP24.86■■□□□ 1.57
U2AF1-202ENST00000380276 RBAKQ9NYW8 714 aaPredicted RBP24.86■■□□□ 1.57
U2AF1-202ENST00000380276 ADSSP30520 456 aa24.85■■□□□ 1.57
U2AF1-202ENST00000380276 TXLNAP40222 546 aa24.85■■□□□ 1.57
U2AF1-202ENST00000380276 MYL7Q01449 175 aa24.85■■□□□ 1.57
U2AF1-202ENST00000380276 POU5F1Q01860 360 aaKnown RBP24.85■■□□□ 1.57
U2AF1-202ENST00000380276 TMEM196Q5HYL7 178 aa24.85■■□□□ 1.57
U2AF1-202ENST00000380276 RRAGBQ5VZM2 374 aa24.85■■□□□ 1.57
U2AF1-202ENST00000380276 CACTINQ8WUQ7 758 aaKnown RBP24.85■■□□□ 1.57
U2AF1-202ENST00000380276 GAB3Q8WWW8 586 aa24.85■■□□□ 1.57
U2AF1-202ENST00000380276 STK17AQ9UEE5 414 aa24.85■■□□□ 1.57
U2AF1-202ENST00000380276 L1RE1Q9UN81 338 aa24.85■■□□□ 1.57
U2AF1-202ENST00000380276 CLIC4Q9Y696 253 aa24.85■■□□□ 1.57
U2AF1-202ENST00000380276 GOLGA8IPA6NC78 632 aa24.84■■□□□ 1.57
U2AF1-202ENST00000380276 GOLGA8JA6NMD2 632 aa24.84■■□□□ 1.57
U2AF1-202ENST00000380276 FOXD2O60548 495 aaPredicted RBP24.84■■□□□ 1.57
U2AF1-202ENST00000380276 RNF40O75150 1001 aa24.84■■□□□ 1.57
U2AF1-202ENST00000380276 EGFP01133 1207 aa24.84■■□□□ 1.57
U2AF1-202ENST00000380276 IDEP14735 1019 aa24.84■■□□□ 1.57
U2AF1-202ENST00000380276 HOXA6P31267 233 aa24.84■■□□□ 1.57
U2AF1-202ENST00000380276 WNT7BP56706 349 aa24.84■■□□□ 1.57
U2AF1-202ENST00000380276 RPL10AP62906 217 aaKnown RBP24.84■■□□□ 1.57
U2AF1-202ENST00000380276 KCNA1Q09470 495 aa24.84■■□□□ 1.57
U2AF1-202ENST00000380276 SF3A2Q15428 464 aaKnown RBP24.84■■□□□ 1.57
U2AF1-202ENST00000380276 L1TD1Q5T7N2 865 aaKnown RBP24.84■■□□□ 1.57
U2AF1-202ENST00000380276 SV2BQ7L1I2 683 aa24.84■■□□□ 1.57
U2AF1-202ENST00000380276 CACNA2D4Q7Z3S7 1137 aa24.84■■□□□ 1.57
U2AF1-202ENST00000380276 MON1AQ86VX9 555 aa24.84■■□□□ 1.57
U2AF1-202ENST00000380276 BRSK2Q8IWQ3 736 aa24.84■■□□□ 1.57
U2AF1-202ENST00000380276 ZSWIM2Q8NEG5 633 aa24.84■■□□□ 1.57
U2AF1-202ENST00000380276 CHAMP1Q96JM3 812 aa24.84■■□□□ 1.57
U2AF1-202ENST00000380276 UXTQ9UBK9 157 aaPredicted RBP24.84■■□□□ 1.57
U2AF1-202ENST00000380276 SEL1LQ9UBV2 794 aa24.84■■□□□ 1.57
U2AF1-202ENST00000380276 R3HCC1Q9Y3T6 440 aaKnown RBP24.84■■□□□ 1.57
U2AF1-202ENST00000380276 OTOL1A6NHN0 477 aaPredicted RBP24.83■■□□□ 1.57
U2AF1-202ENST00000380276 GAP43P17677 238 aa24.83■■□□□ 1.57
U2AF1-202ENST00000380276 CYP2F1P24903 491 aa24.83■■□□□ 1.57
U2AF1-202ENST00000380276 INTS6LQ5JSJ4 861 aaKnown RBP24.83■■□□□ 1.57
U2AF1-202ENST00000380276 SCN4BQ8IWT1 228 aa24.83■■□□□ 1.57
U2AF1-202ENST00000380276 CSGALNACT2Q8N6G5 542 aa24.83■■□□□ 1.57
U2AF1-202ENST00000380276 C1orf127Q8N9H9 656 aa24.83■■□□□ 1.57
U2AF1-202ENST00000380276 FAM84AQ96KN4 292 aa24.83■■□□□ 1.57
U2AF1-202ENST00000380276 POLR3BQ9NW08 1133 aaPredicted RBP24.83■■□□□ 1.57
U2AF1-202ENST00000380276 GTF3C4Q9UKN8 822 aa24.83■■□□□ 1.57
U2AF1-202ENST00000380276 SNX9Q9Y5X1 595 aa24.83■■□□□ 1.57
U2AF1-202ENST00000380276 MYMKA6NI61 221 aa24.82■■□□□ 1.56
U2AF1-202ENST00000380276 TRDMT1O14717 391 aaKnown RBP24.82■■□□□ 1.56
U2AF1-202ENST00000380276 OBSL1O75147 1896 aa24.82■■□□□ 1.56
U2AF1-202ENST00000380276 PPP1R37O75864 691 aa24.82■■□□□ 1.56
U2AF1-202ENST00000380276 KRT37O76014 449 aa24.82■■□□□ 1.56
U2AF1-202ENST00000380276 LDHAP00338 332 aaKnown RBP24.82■■□□□ 1.56
U2AF1-202ENST00000380276 CKMP06732 381 aa24.82■■□□□ 1.56
U2AF1-202ENST00000380276 TMEM191BP0C7N4 346 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms