RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 GOLGA8SH3BPF8 625 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 ACSL3O95573 720 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 CALB1P05937 261 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 ATF7P17544 494 aaPredicted RBP8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 ITIH2P19823 946 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 CDH5P33151 784 aaPredicted RBP8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 MAN1A1P33908 653 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 RFC1P35251 1148 aaPredicted RBP8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 ADCY8P40145 1251 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 LACTBP83111 547 aaPredicted RBP8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 SLMAPQ14BN4 828 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 CCNG2Q16589 344 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 KIAA0319LQ8IZA0 1049 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 LINC01465Q8N7H1 131 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 SHCBP1Q8NEM2 672 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 JOSD2Q8TAC2 188 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 L3MBTL3Q96JM7 780 aaPredicted RBP8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 C16orf70Q9BSU1 422 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 TMUB1Q9BVT8 246 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 CXCL16Q9H2A7 254 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 ADAM7Q9H2U9 754 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 PDZD7Q9H5P4 517 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 DNPEPQ9ULA0 475 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 AKT3Q9Y243 479 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 FOXO6A8MYZ6 492 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 PDHXO00330 501 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 ASAP2O43150 1006 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 KRT1P04264 644 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 ARF4P18085 180 aaPredicted RBP8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 EIF4BP23588 611 aaKnown RBP8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 LAMC2Q13753 1193 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 BYSLQ13895 437 aaKnown RBP8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 QPCTQ16769 361 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 LONRF1Q17RB8 773 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 SLC10A6Q3KNW5 377 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 ZNF667Q5HYK9 610 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 HOOK3Q86VS8 718 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 ARFGAP1Q8N6T3 406 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 GPRC5AQ8NFJ5 357 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 PGM2Q96G03 612 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 SCLT1Q96NL6 688 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 CPXM1Q96SM3 734 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 BCO2Q9BYV7 579 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 KATNBL1Q9H079 304 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 FAM169AQ9Y6X4 670 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 SCN1AP35498 2009 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 DOCK3Q8IZD9 2030 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 SNAI1O95863 264 aaPredicted RBP8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 GAS8O95995 478 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 GH1P01241 217 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 ZSCAN5DPP0CG00 497 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 ETS1P14921 441 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 ATF2P15336 505 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 KLRC2P26717 231 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 PHKA2P46019 1235 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 CORO7P57737 925 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 IRX5P78411 483 aaPredicted RBP8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 AUHQ13825 339 aaKnown RBP8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 KYNUQ16719 465 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 CCDC38Q502W7 563 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 ZNF484Q5JVG2 852 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 OTUD6BQ8N6M0 293 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 EMC1Q8N766 993 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 SLC4A11Q8NBS3 891 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 C3orf20Q8ND61 904 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 HAUS1Q96CS2 278 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 MS4A3Q96HJ5 214 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 NFKBIZQ9BYH8 718 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 ELOVL4Q9GZR5 314 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 PRMT7Q9NVM4 692 aaPredicted RBP8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 ANAPC5Q9UJX4 755 aa8.41□□□□□ -1.06
PDLIM5-204ENST00000380176 BTBD19C9JJ37 291 aa8.4□□□□□ -1.06
PDLIM5-204ENST00000380176 RGS16O15492 202 aaPredicted RBP8.4□□□□□ -1.06
PDLIM5-204ENST00000380176 TRAPPC3O43617 180 aa8.4□□□□□ -1.06
PDLIM5-204ENST00000380176 IL18RAPO95256 599 aa8.4□□□□□ -1.06
PDLIM5-204ENST00000380176 SMTNL2Q2TAL5 461 aa8.4□□□□□ -1.06
PDLIM5-204ENST00000380176 KCNT1Q5JUK3 1230 aa8.4□□□□□ -1.06
PDLIM5-204ENST00000380176 MARCH8Q5T0T0 291 aa8.4□□□□□ -1.06
PDLIM5-204ENST00000380176 SPOCD1Q6ZMY3 1216 aa8.4□□□□□ -1.06
PDLIM5-204ENST00000380176 SYDE1Q6ZW31 735 aaPredicted RBP8.4□□□□□ -1.06
PDLIM5-204ENST00000380176 ILDR2Q71H61 639 aa8.4□□□□□ -1.06
PDLIM5-204ENST00000380176 RCOR2Q8IZ40 523 aa8.4□□□□□ -1.06
PDLIM5-204ENST00000380176 PPTC7Q8NI37 304 aa8.4□□□□□ -1.06
PDLIM5-204ENST00000380176 GRK7Q8WTQ7 553 aa8.4□□□□□ -1.06
PDLIM5-204ENST00000380176 ZNF518BQ9C0D4 1074 aa8.4□□□□□ -1.06
PDLIM5-204ENST00000380176 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.4□□□□□ -1.06
PDLIM5-204ENST00000380176 SAE1Q9UBE0 346 aaPredicted RBP8.4□□□□□ -1.06
PDLIM5-204ENST00000380176 CTNNAL1Q9UBT7 734 aa8.4□□□□□ -1.06
PDLIM5-204ENST00000380176 FEZ2Q9UHY8 353 aaPredicted RBP8.4□□□□□ -1.06
PDLIM5-204ENST00000380176 GMNCA6NCL1 334 aa8.4□□□□□ -1.06
PDLIM5-204ENST00000380176 RASGRF2O14827 1237 aa8.4□□□□□ -1.06
PDLIM5-204ENST00000380176 ADCY6O43306 1168 aa8.4□□□□□ -1.06
PDLIM5-204ENST00000380176 LIASO43766 372 aa8.4□□□□□ -1.06
PDLIM5-204ENST00000380176 FAM107AO95990 144 aa8.4□□□□□ -1.06
PDLIM5-204ENST00000380176 ERBB2P04626 1255 aa8.4□□□□□ -1.06
PDLIM5-204ENST00000380176 CHN1P15882 459 aa8.4□□□□□ -1.06
PDLIM5-204ENST00000380176 IL1R2P27930 398 aa8.4□□□□□ -1.06
PDLIM5-204ENST00000380176 POLR2BP30876 1174 aaKnown RBP8.4□□□□□ -1.06
PDLIM5-204ENST00000380176 FAM187BQ17R55 369 aa8.4□□□□□ -1.06
PDLIM5-204ENST00000380176 TNFAIP8L3Q5GJ75 292 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms