RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 DNAJC14Q6Y2X3 702 aaPredicted RBP11.44□□□□□ -0.58
USP6NL-202ENST00000379237 SLC7A5P1Q8MH63 180 aa11.44□□□□□ -0.58
USP6NL-202ENST00000379237 IFT43Q96FT9 208 aa11.44□□□□□ -0.58
USP6NL-202ENST00000379237 RMND5BQ96G75 393 aaPredicted RBP11.44□□□□□ -0.58
USP6NL-202ENST00000379237 EFHD1Q9BUP0 239 aa11.44□□□□□ -0.58
USP6NL-202ENST00000379237 GIMAP4Q9NUV9 329 aa11.44□□□□□ -0.58
USP6NL-202ENST00000379237 STXBP5LQ9Y2K9 1186 aa11.44□□□□□ -0.58
USP6NL-202ENST00000379237 SETD1AO15047 1707 aaKnown RBP11.44□□□□□ -0.58
USP6NL-202ENST00000379237 PRR5-ARHGAP8B1AHC4 643 aa11.44□□□□□ -0.58
USP6NL-202ENST00000379237 KPNA4O00629 521 aaPredicted RBP11.44□□□□□ -0.58
USP6NL-202ENST00000379237 TM9SF1O15321 606 aa11.44□□□□□ -0.58
USP6NL-202ENST00000379237 PDE8AO60658 829 aa11.44□□□□□ -0.58
USP6NL-202ENST00000379237 OXSR1O95747 527 aaPredicted RBP11.44□□□□□ -0.58
USP6NL-202ENST00000379237 ENO3P13929 434 aaPredicted RBP11.44□□□□□ -0.58
USP6NL-202ENST00000379237 PHKG2P15735 406 aa11.44□□□□□ -0.58
USP6NL-202ENST00000379237 ARHGAP8P85298 464 aa11.44□□□□□ -0.58
USP6NL-202ENST00000379237 XIAPP98170 497 aa11.44□□□□□ -0.58
USP6NL-202ENST00000379237 PDK1Q15118 436 aa11.44□□□□□ -0.58
USP6NL-202ENST00000379237 TBCCQ15814 346 aa11.44□□□□□ -0.58
USP6NL-202ENST00000379237 UBE2SQ16763 222 aa11.44□□□□□ -0.58
USP6NL-202ENST00000379237 RNF19BQ6ZMZ0 732 aa11.44□□□□□ -0.58
USP6NL-202ENST00000379237 C4orf32Q8N8J7 132 aa11.44□□□□□ -0.58
USP6NL-202ENST00000379237 AGR3Q8TD06 166 aa11.44□□□□□ -0.58
USP6NL-202ENST00000379237 SCFD1Q8WVM8 642 aa11.44□□□□□ -0.58
USP6NL-202ENST00000379237 WRNIP1Q96S55 665 aa11.44□□□□□ -0.58
USP6NL-202ENST00000379237 NRDE2Q9H7Z3 1164 aa11.44□□□□□ -0.58
USP6NL-202ENST00000379237 SLC17A7Q9P2U7 560 aa11.44□□□□□ -0.58
USP6NL-202ENST00000379237 APEX2Q9UBZ4 518 aa11.44□□□□□ -0.58
USP6NL-202ENST00000379237 IGSF9BQ9UPX0 1349 aa11.44□□□□□ -0.58
USP6NL-202ENST00000379237 AKAP3O75969 853 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 DDHD2O94830 711 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 C6orf222P0C671 652 aaPredicted RBP11.43□□□□□ -0.58
USP6NL-202ENST00000379237 UBAP2LQ14157 1087 aaKnown RBP11.43□□□□□ -0.58
USP6NL-202ENST00000379237 PRR16Q569H4 304 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 C6orf52Q5T4I8 152 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 SYCP2LQ5T4T6 812 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 DUS1LQ6P1R4 473 aaKnown RBP11.43□□□□□ -0.58
USP6NL-202ENST00000379237 POTEGQ6S5H5 508 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 NRBF2Q96F24 287 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 COQ7Q99807 217 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 ADA2Q9NZK5 511 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 TMEM98Q9Y2Y6 226 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 RNF103-CHMP3A0A140T963 221 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 NAT1P18440 290 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 FMO5P49326 533 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 TRAF2Q12933 501 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 KRT72Q14CN4 511 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 MYLK3Q32MK0 819 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 FSCBQ5H9T9 825 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 CASC4Q6P4E1 433 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 HEATR4Q86WZ0 1026 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 ANKRD36BP1Q96IX9 119 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 FOXP3Q9BZS1 431 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 VPS11Q9H270 941 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 DDX56Q9NY93 547 aaKnown RBP11.43□□□□□ -0.58
USP6NL-202ENST00000379237 MYRFQ9Y2G1 1151 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 CACNA1FO60840 1977 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 PIK3CDO00329 1044 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 KLHL41O60662 606 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 SSTR1P30872 391 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 RXRGP48443 463 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 POU5F1Q01860 360 aaKnown RBP11.43□□□□□ -0.58
USP6NL-202ENST00000379237 SLC2A7Q6PXP3 512 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 SIX6OS1Q8N1H7 587 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 RNF148Q8N7C7 305 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 GIN1Q9NXP7 522 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 SLC24A2Q9UI40 661 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 ARIH1Q9Y4X5 557 aaPredicted RBP11.43□□□□□ -0.58
USP6NL-202ENST00000379237 SH3PXD2BA1X283 911 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 DGKIO75912 1065 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 CETPP11597 493 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 SERPINB1P30740 379 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 GCLMP48507 274 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 RAP1GDS1P52306 607 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 GPSM2P81274 684 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 C11orf63Q6NUN7 778 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 DENND5BQ6ZUT9 1274 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 ERI1Q8IV48 349 aaKnown RBP11.43□□□□□ -0.58
USP6NL-202ENST00000379237 TPH2Q8IWU9 490 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.43□□□□□ -0.58
USP6NL-202ENST00000379237 DYNLL2Q96FJ2 89 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 USP29Q9HBJ7 922 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 LGALS13Q9UHV8 139 aa11.43□□□□□ -0.58
USP6NL-202ENST00000379237 PRPF4O43172 522 aaKnown RBP eCLIP11.42□□□□□ -0.58
USP6NL-202ENST00000379237 SORBS3O60504 671 aa11.42□□□□□ -0.58
USP6NL-202ENST00000379237 FOXD2O60548 495 aaPredicted RBP11.42□□□□□ -0.58
USP6NL-202ENST00000379237 JAK1P23458 1154 aa11.42□□□□□ -0.58
USP6NL-202ENST00000379237 TKTP29401 623 aaKnown RBP11.42□□□□□ -0.58
USP6NL-202ENST00000379237 RPS6P62753 249 aaKnown RBP11.42□□□□□ -0.58
USP6NL-202ENST00000379237 TFDP1Q14186 410 aa11.42□□□□□ -0.58
USP6NL-202ENST00000379237 SH3GL1Q99961 368 aa11.42□□□□□ -0.58
USP6NL-202ENST00000379237 HEPHQ9BQS7 1158 aa11.42□□□□□ -0.58
USP6NL-202ENST00000379237 NOL6Q9H6R4 1146 aaKnown RBP11.42□□□□□ -0.58
USP6NL-202ENST00000379237 ITM2BQ9Y287 266 aa11.42□□□□□ -0.58
USP6NL-202ENST00000379237 EFR3BQ9Y2G0 817 aa11.42□□□□□ -0.58
USP6NL-202ENST00000379237 KRT8P05787 483 aa11.42□□□□□ -0.58
USP6NL-202ENST00000379237 AKR1B1P15121 316 aa11.42□□□□□ -0.58
USP6NL-202ENST00000379237 NUDT2P50583 147 aa11.42□□□□□ -0.58
USP6NL-202ENST00000379237 POTEHQ6S545 545 aa11.42□□□□□ -0.58
USP6NL-202ENST00000379237 CATSPER3Q86XQ3 398 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms