RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 RXRBP28702 533 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 DSG1Q02413 1049 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 TRAF2Q12933 501 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 CCDC17Q96LX7 622 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 PRRG4Q9BZD6 226 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 HERC5Q9UII4 1024 aaKnown RBP13.8□□□□□ -0.2
HIPK3-202ENST00000379016 BTN3A3O00478 584 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 USP17L8P0C7I0 530 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 PAICSP22234 425 aaKnown RBP13.79□□□□□ -0.2
HIPK3-202ENST00000379016 RPS6KA3P51812 740 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 CDH18Q13634 790 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 PRUNE1Q86TP1 453 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 CYP4X1Q8N118 509 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 TRIM51Q9BSJ1 452 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 KIAA1586Q9HCI6 787 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 CHKBQ9Y259 395 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 EIF3LQ9Y262 564 aaKnown RBP13.79□□□□□ -0.2
HIPK3-202ENST00000379016 TIMM8BQ9Y5J9 83 aaPredicted RBP13.79□□□□□ -0.2
HIPK3-202ENST00000379016 RTN3O95197 1032 aaPredicted RBP13.79□□□□□ -0.2
HIPK3-202ENST00000379016 EIF2B2P49770 351 aaKnown RBP13.79□□□□□ -0.2
HIPK3-202ENST00000379016 OTUD4Q01804 1114 aaKnown RBP13.79□□□□□ -0.2
HIPK3-202ENST00000379016 MTM1Q13496 603 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 SWSAP1Q6NVH7 229 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 UTS2BQ765I0 119 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 ATL2Q8NHH9 583 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 TMEM63CQ9P1W3 806 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 USP17L3A6NCW0 530 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 USP17L4A6NCW7 530 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 FTLP02792 175 aaPredicted RBP13.79□□□□□ -0.2
HIPK3-202ENST00000379016 ALOX12P18054 663 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 MAGEA9P43362 315 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 DALRD3Q5D0E6 543 aaKnown RBP13.79□□□□□ -0.2
HIPK3-202ENST00000379016 CCDC137Q6PK04 289 aaKnown RBP13.79□□□□□ -0.2
HIPK3-202ENST00000379016 USP17L1Q7RTZ2 530 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 UNKQ9C0B0 810 aaKnown RBP13.79□□□□□ -0.2
HIPK3-202ENST00000379016 RIC8BQ9NVN3 520 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 SMARCAL1Q9NZC9 954 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 AKAP7Q9P0M2 348 aaPredicted RBP13.79□□□□□ -0.2
HIPK3-202ENST00000379016 ZBTB1Q9Y2K1 713 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 HIST1H2ABP04908 130 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 UBA1P22314 1058 aaKnown RBP13.79□□□□□ -0.2
HIPK3-202ENST00000379016 PSMD4P55036 377 aaKnown RBP13.79□□□□□ -0.2
HIPK3-202ENST00000379016 HIST3H2AQ7L7L0 130 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 NECAB2Q7Z6G3 386 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 HIST1H2ACQ93077 130 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 KLHL3Q9UH77 587 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 SRP68Q9UHB9 627 aaKnown RBP13.79□□□□□ -0.2
HIPK3-202ENST00000379016 TFRCP02786 760 aaKnown RBP13.79□□□□□ -0.2
HIPK3-202ENST00000379016 PKN2Q16513 984 aaKnown RBP13.79□□□□□ -0.2
HIPK3-202ENST00000379016 SLFNL1Q499Z3 407 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 DIS3Q9Y2L1 958 aaKnown RBP13.79□□□□□ -0.2
HIPK3-202ENST00000379016 DYRK1BQ9Y463 629 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 ZHX2Q9Y6X8 837 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 ABCC1P33527 1531 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 PSMD3O43242 534 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 CHP2O43745 196 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 FGAP02671 866 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 CACHD1Q5VU97 1274 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 ULK2Q8IYT8 1036 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 PJA1Q8NG27 643 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 RAB6BQ9NRW1 208 aa13.79□□□□□ -0.2
HIPK3-202ENST00000379016 B2RBV5 119 aa13.78□□□□□ -0.2
HIPK3-202ENST00000379016 VAV1P15498 845 aa13.78□□□□□ -0.2
HIPK3-202ENST00000379016 RAB2AP61019 212 aa13.78□□□□□ -0.2
HIPK3-202ENST00000379016 ABATP80404 500 aa13.78□□□□□ -0.2
HIPK3-202ENST00000379016 CCDC54Q8NEL0 328 aa13.78□□□□□ -0.2
HIPK3-202ENST00000379016 TRMT6Q9UJA5 497 aaKnown RBP13.78□□□□□ -0.2
HIPK3-202ENST00000379016 H7C1W4 665 aa13.78□□□□□ -0.2
HIPK3-202ENST00000379016 GRAP2O75791 330 aa13.78□□□□□ -0.2
HIPK3-202ENST00000379016 ASS1P00966 412 aaKnown RBP13.78□□□□□ -0.2
HIPK3-202ENST00000379016 SKIV2L2P42285 1042 aaKnown RBP13.78□□□□□ -0.2
HIPK3-202ENST00000379016 C10orf120Q5SQS8 335 aa13.78□□□□□ -0.2
HIPK3-202ENST00000379016 PNMA5Q96PV4 448 aa13.78□□□□□ -0.2
HIPK3-202ENST00000379016 CINPQ9BW66 212 aaPredicted RBP13.78□□□□□ -0.2
HIPK3-202ENST00000379016 SGSM2O43147 1006 aa13.78□□□□□ -0.2
HIPK3-202ENST00000379016 STAU1O95793 577 aaKnown RBP13.78□□□□□ -0.2
HIPK3-202ENST00000379016 TFE3P19532 575 aaPredicted RBP13.78□□□□□ -0.2
HIPK3-202ENST00000379016 NPY2RP49146 381 aa13.78□□□□□ -0.2
HIPK3-202ENST00000379016 FLAD1Q8NFF5 587 aa13.78□□□□□ -0.2
HIPK3-202ENST00000379016 SASH1O94885 1247 aa13.78□□□□□ -0.2
HIPK3-202ENST00000379016 HSD3B1P14060 373 aa13.78□□□□□ -0.2
HIPK3-202ENST00000379016 FGFR2P21802 821 aa13.78□□□□□ -0.2
HIPK3-202ENST00000379016 PTSQ03393 145 aa13.78□□□□□ -0.2
HIPK3-202ENST00000379016 DPF3Q92784 378 aa13.78□□□□□ -0.2
HIPK3-202ENST00000379016 KATNAL1Q9BW62 490 aa13.78□□□□□ -0.2
HIPK3-202ENST00000379016 NDST4Q9H3R1 872 aa13.78□□□□□ -0.2
HIPK3-202ENST00000379016 LNPEPQ9UIQ6 1025 aa13.78□□□□□ -0.2
HIPK3-202ENST00000379016 DENND4BO75064 1496 aaPredicted RBP13.78□□□□□ -0.2
HIPK3-202ENST00000379016 TBXAS1P24557 533 aaPredicted RBP13.78□□□□□ -0.2
HIPK3-202ENST00000379016 FNTAP49354 379 aa13.78□□□□□ -0.2
HIPK3-202ENST00000379016 VAMP7P51809 220 aa13.78□□□□□ -0.2
HIPK3-202ENST00000379016 ALCAMQ13740 583 aa13.78□□□□□ -0.2
HIPK3-202ENST00000379016 C7orf25Q9BPX7 421 aa13.78□□□□□ -0.2
HIPK3-202ENST00000379016 KCTD10Q9H3F6 313 aa13.78□□□□□ -0.2
HIPK3-202ENST00000379016 ZNF222Q9UK12 451 aa13.78□□□□□ -0.2
HIPK3-202ENST00000379016 PYCARDQ9ULZ3 195 aa13.78□□□□□ -0.2
HIPK3-202ENST00000379016 SH3D21A4FU49 640 aa13.78□□□□□ -0.2
HIPK3-202ENST00000379016 DYNC1LI2O43237 492 aaPredicted RBP13.78□□□□□ -0.2
HIPK3-202ENST00000379016 UGT3A1Q6NUS8 523 aa13.78□□□□□ -0.2
HIPK3-202ENST00000379016 SERAC1Q96JX3 654 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms