RNA–Protein interactions for RNA: ENST00000378546.8

FAAP20-202, Transcript of FA core complex associated protein 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAAP20, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-202ENST00000378546 FAM3CQ92520 227 aa27.34■■□□□ 1.97
FAAP20-202ENST00000378546 CCDC127Q96BQ5 260 aa27.34■■□□□ 1.97
FAAP20-202ENST00000378546 RSPRY1Q96DX4 576 aa27.34■■□□□ 1.97
FAAP20-202ENST00000378546 TASP1Q9H6P5 420 aa27.34■■□□□ 1.97
FAAP20-202ENST00000378546 SERTAD1Q9UHV2 236 aa27.34■■□□□ 1.97
FAAP20-202ENST00000378546 PVALEFA0A1B0GWK0 134 aa27.33■■□□□ 1.97
FAAP20-202ENST00000378546 TGFB1I1O43294 461 aa27.33■■□□□ 1.97
FAAP20-202ENST00000378546 GPR15P49685 360 aa27.33■■□□□ 1.97
FAAP20-202ENST00000378546 KPNA1P52294 538 aaPredicted RBP27.33■■□□□ 1.97
FAAP20-202ENST00000378546 SNRPFP62306 86 aaKnown RBP27.33■■□□□ 1.97
FAAP20-202ENST00000378546 XXYLT1Q8NBI6 393 aa27.33■■□□□ 1.97
FAAP20-202ENST00000378546 SPATA18Q8TC71 538 aa27.33■■□□□ 1.97
FAAP20-202ENST00000378546 LEO1Q8WVC0 666 aaPredicted RBP27.33■■□□□ 1.97
FAAP20-202ENST00000378546 SPATA32Q96LK8 384 aa27.33■■□□□ 1.97
FAAP20-202ENST00000378546 MMS19Q96T76 1030 aa27.33■■□□□ 1.97
FAAP20-202ENST00000378546 TRPV5Q9NQA5 729 aa27.33■■□□□ 1.97
FAAP20-202ENST00000378546 EXOC1Q9NV70 894 aa27.33■■□□□ 1.97
FAAP20-202ENST00000378546 RCOR1Q9UKL0 485 aa27.33■■□□□ 1.97
FAAP20-202ENST00000378546 RPL10AP62906 217 aaKnown RBP27.32■■□□□ 1.96
FAAP20-202ENST00000378546 SDHAF4Q5VUM1 108 aa27.32■■□□□ 1.96
FAAP20-202ENST00000378546 OSTM1Q86WC4 334 aa27.32■■□□□ 1.96
FAAP20-202ENST00000378546 STKLD1Q8NE28 680 aa27.32■■□□□ 1.96
FAAP20-202ENST00000378546 MKNK1Q9BUB5 465 aa27.32■■□□□ 1.96
FAAP20-202ENST00000378546 IL21Q9HBE4 155 aa27.32■■□□□ 1.96
FAAP20-202ENST00000378546 ABCB6Q9NP58 842 aa27.32■■□□□ 1.96
FAAP20-202ENST00000378546 GTF3C4Q9UKN8 822 aa27.32■■□□□ 1.96
FAAP20-202ENST00000378546 USP34Q70CQ2 3546 aa27.32■■□□□ 1.96
FAAP20-202ENST00000378546 CHADO15335 359 aa27.31■■□□□ 1.96
FAAP20-202ENST00000378546 SLFN14P0C7P3 912 aa27.31■■□□□ 1.96
FAAP20-202ENST00000378546 CSH1P0DML2 217 aa27.31■■□□□ 1.96
FAAP20-202ENST00000378546 CSH2P0DML3 217 aa27.31■■□□□ 1.96
FAAP20-202ENST00000378546 KRT85P78386 507 aa27.31■■□□□ 1.96
FAAP20-202ENST00000378546 CYP24A1Q07973 514 aa27.31■■□□□ 1.96
FAAP20-202ENST00000378546 EHHADHQ08426 723 aa27.31■■□□□ 1.96
FAAP20-202ENST00000378546 SOWAHAQ2M3V2 549 aa27.31■■□□□ 1.96
FAAP20-202ENST00000378546 CGRRF1Q99675 332 aa27.31■■□□□ 1.96
FAAP20-202ENST00000378546 SLC38A8A6NNN8 435 aa27.3■■□□□ 1.96
FAAP20-202ENST00000378546 HCRTO43612 131 aa27.3■■□□□ 1.96
FAAP20-202ENST00000378546 EXOC3O60645 756 aa27.3■■□□□ 1.96
FAAP20-202ENST00000378546 PRAMEF12O95522 483 aa27.3■■□□□ 1.96
FAAP20-202ENST00000378546 PFKFB1P16118 471 aa27.3■■□□□ 1.96
FAAP20-202ENST00000378546 CYP2F1P24903 491 aa27.3■■□□□ 1.96
FAAP20-202ENST00000378546 AVPR1AP37288 418 aa27.3■■□□□ 1.96
FAAP20-202ENST00000378546 RPS9P46781 194 aaKnown RBP27.3■■□□□ 1.96
FAAP20-202ENST00000378546 CSTF1Q05048 431 aaKnown RBP27.3■■□□□ 1.96
FAAP20-202ENST00000378546 FCHO2Q0JRZ9 810 aa27.3■■□□□ 1.96
FAAP20-202ENST00000378546 PSMD6Q15008 389 aa27.3■■□□□ 1.96
FAAP20-202ENST00000378546 DDR2Q16832 855 aa27.3■■□□□ 1.96
FAAP20-202ENST00000378546 KNOP1Q1ED39 458 aaKnown RBP27.3■■□□□ 1.96
FAAP20-202ENST00000378546 ARHGAP29Q52LW3 1261 aa27.3■■□□□ 1.96
FAAP20-202ENST00000378546 TRAPPC11Q7Z392 1133 aa27.3■■□□□ 1.96
FAAP20-202ENST00000378546 SCN4BQ8IWT1 228 aa27.3■■□□□ 1.96
FAAP20-202ENST00000378546 ADSSL1Q8N142 457 aa27.3■■□□□ 1.96
FAAP20-202ENST00000378546 BPIFB1Q8TDL5 484 aa27.3■■□□□ 1.96
FAAP20-202ENST00000378546 CLDN23Q96B33 292 aa27.3■■□□□ 1.96
FAAP20-202ENST00000378546 SYT15Q9BQS2 421 aa27.3■■□□□ 1.96
FAAP20-202ENST00000378546 SMG9Q9H0W8 520 aaKnown RBP27.3■■□□□ 1.96
FAAP20-202ENST00000378546 SEMA4AQ9H3S1 761 aa27.3■■□□□ 1.96
FAAP20-202ENST00000378546 OBP2AQ9NY56 170 aa27.3■■□□□ 1.96
FAAP20-202ENST00000378546 CGNQ9P2M7 1197 aaKnown RBP27.3■■□□□ 1.96
FAAP20-202ENST00000378546 ZMYM5Q9UJ78 669 aa27.3■■□□□ 1.96
FAAP20-202ENST00000378546 FBXO4Q9UKT5 387 aa27.3■■□□□ 1.96
FAAP20-202ENST00000378546 CACNA1IQ9P0X4 2223 aa27.29■■□□□ 1.96
FAAP20-202ENST00000378546 A0A1B0GVL5 298 aa27.29■■□□□ 1.96
FAAP20-202ENST00000378546 LMNAP02545 664 aaKnown RBP27.29■■□□□ 1.96
FAAP20-202ENST00000378546 CCNE1P24864 410 aa27.29■■□□□ 1.96
FAAP20-202ENST00000378546 NLRP12P59046 1061 aa27.29■■□□□ 1.96
FAAP20-202ENST00000378546 PSMC1P62191 440 aaKnown RBP27.29■■□□□ 1.96
FAAP20-202ENST00000378546 CCDC142Q17RM4 750 aa27.29■■□□□ 1.96
FAAP20-202ENST00000378546 BMT2Q1RMZ1 405 aa27.29■■□□□ 1.96
FAAP20-202ENST00000378546 C4orf50Q6ZRC1 276 aa27.29■■□□□ 1.96
FAAP20-202ENST00000378546 DPH6Q7L8W6 267 aa27.29■■□□□ 1.96
FAAP20-202ENST00000378546 TTC8Q8TAM2 541 aa27.29■■□□□ 1.96
FAAP20-202ENST00000378546 GOLGA5Q8TBA6 731 aa27.29■■□□□ 1.96
FAAP20-202ENST00000378546 MRPS31Q92665 395 aaKnown RBP27.29■■□□□ 1.96
FAAP20-202ENST00000378546 MSANTD3Q96H12 275 aa27.29■■□□□ 1.96
FAAP20-202ENST00000378546 ZFYVE19Q96K21 471 aa27.29■■□□□ 1.96
FAAP20-202ENST00000378546 HINFPQ9BQA5 517 aa27.29■■□□□ 1.96
FAAP20-202ENST00000378546 THG1LQ9NWX6 298 aaKnown RBP27.29■■□□□ 1.96
FAAP20-202ENST00000378546 ZNF638Q14966 1978 aaKnown RBP27.28■■□□□ 1.96
FAAP20-202ENST00000378546 GABRDO14764 452 aa27.28■■□□□ 1.96
FAAP20-202ENST00000378546 ACTN4O43707 911 aaKnown RBP27.28■■□□□ 1.96
FAAP20-202ENST00000378546 TNNC1P63316 161 aa27.28■■□□□ 1.96
FAAP20-202ENST00000378546 TRPC3Q13507 836 aa27.28■■□□□ 1.96
FAAP20-202ENST00000378546 CELF5Q8N6W0 485 aaKnown RBP27.28■■□□□ 1.96
FAAP20-202ENST00000378546 MAB21L3Q8N8X9 362 aa27.28■■□□□ 1.96
FAAP20-202ENST00000378546 PAGE5Q96GU1 130 aa27.28■■□□□ 1.96
FAAP20-202ENST00000378546 SNX25Q9H3E2 840 aa27.28■■□□□ 1.96
FAAP20-202ENST00000378546 UXTQ9UBK9 157 aaPredicted RBP27.28■■□□□ 1.96
FAAP20-202ENST00000378546 CDH9Q9ULB4 789 aa27.28■■□□□ 1.96
FAAP20-202ENST00000378546 OBSL1O75147 1896 aa27.27■■□□□ 1.96
FAAP20-202ENST00000378546 MYBPHLA2RUH7 354 aa27.27■■□□□ 1.96
FAAP20-202ENST00000378546 ARNTLO00327 626 aa27.27■■□□□ 1.96
FAAP20-202ENST00000378546 PHACTR2O75167 634 aa27.27■■□□□ 1.96
FAAP20-202ENST00000378546 HMGA1P17096 107 aaKnown RBP27.27■■□□□ 1.96
FAAP20-202ENST00000378546 DDX6P26196 483 aaKnown RBP eCLIP27.27■■□□□ 1.967e-8■■■□□ 17.2
FAAP20-202ENST00000378546 C1orf228Q6PIY5 440 aa27.27■■□□□ 1.96
FAAP20-202ENST00000378546 MAML2Q8IZL2 1156 aaPredicted RBP27.27■■□□□ 1.96
FAAP20-202ENST00000378546 CMTM8Q8IZV2 173 aa27.27■■□□□ 1.96
FAAP20-202ENST00000378546 KBTBD7Q8WVZ9 684 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms