RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 CORO1BQ9BR76 489 aa18.23■□□□□ 0.51
RER1-202ENST00000378512 GTPBP4Q9BZE4 634 aaKnown RBP18.23■□□□□ 0.51
RER1-202ENST00000378512 PLA2G2FQ9BZM2 168 aa18.23■□□□□ 0.51
RER1-202ENST00000378512 TMLHEQ9NVH6 421 aa18.23■□□□□ 0.51
RER1-202ENST00000378512 SLC27A5Q9Y2P5 690 aa18.23■□□□□ 0.51
RER1-202ENST00000378512 MRPS23Q9Y3D9 190 aaKnown RBP18.23■□□□□ 0.51
RER1-202ENST00000378512 NUP210Q8TEM1 1887 aaPredicted RBP18.23■□□□□ 0.51
RER1-202ENST00000378512 PRR23AA6NEV1 266 aa18.23■□□□□ 0.51
RER1-202ENST00000378512 ZNF197O14709 1029 aa18.23■□□□□ 0.51
RER1-202ENST00000378512 TACC1O75410 805 aa18.23■□□□□ 0.51
RER1-202ENST00000378512 AKAP3O75969 853 aa18.23■□□□□ 0.51
RER1-202ENST00000378512 SMC2O95347 1197 aa18.23■□□□□ 0.51
RER1-202ENST00000378512 VNN1O95497 513 aa18.23■□□□□ 0.51
RER1-202ENST00000378512 RFX1P22670 979 aa18.23■□□□□ 0.51
RER1-202ENST00000378512 WARSP23381 471 aaKnown RBP18.23■□□□□ 0.51
RER1-202ENST00000378512 MYL7Q01449 175 aa18.23■□□□□ 0.51
RER1-202ENST00000378512 NFE2Q16621 373 aaPredicted RBP18.23■□□□□ 0.51
RER1-202ENST00000378512 ZACNQ401N2 412 aa18.23■□□□□ 0.51
RER1-202ENST00000378512 IQCEQ6IPM2 695 aa18.23■□□□□ 0.51
RER1-202ENST00000378512 FAM171BQ6P995 826 aa18.23■□□□□ 0.51
RER1-202ENST00000378512 HS6ST3Q8IZP7 471 aa18.23■□□□□ 0.51
RER1-202ENST00000378512 PSMG2Q969U7 264 aa18.23■□□□□ 0.51
RER1-202ENST00000378512 ABCB6Q9NP58 842 aa18.23■□□□□ 0.51
RER1-202ENST00000378512 DLGAP2Q9P1A6 1054 aa18.23■□□□□ 0.51
RER1-202ENST00000378512 HOOK1Q9UJC3 728 aaKnown RBP18.23■□□□□ 0.51
RER1-202ENST00000378512 FRMD4BQ9Y2L6 1034 aa18.23■□□□□ 0.51
RER1-202ENST00000378512 R3HCC1Q9Y3T6 440 aaKnown RBP18.23■□□□□ 0.51
RER1-202ENST00000378512 HAPLN1P10915 354 aaPredicted RBP18.22■□□□□ 0.51
RER1-202ENST00000378512 ATF6P18850 670 aa18.22■□□□□ 0.51
RER1-202ENST00000378512 RPL13P26373 211 aaKnown RBP18.22■□□□□ 0.51
RER1-202ENST00000378512 ANP32AP39687 249 aaKnown RBP18.22■□□□□ 0.51
RER1-202ENST00000378512 ALDH1A3P47895 512 aa18.22■□□□□ 0.51
RER1-202ENST00000378512 EPHB3P54753 998 aa18.22■□□□□ 0.51
RER1-202ENST00000378512 MYL6P60660 151 aa18.22■□□□□ 0.51
RER1-202ENST00000378512 TSPY1Q01534 308 aa18.22■□□□□ 0.51
RER1-202ENST00000378512 ERCC4Q92889 916 aaPredicted RBP18.22■□□□□ 0.51
RER1-202ENST00000378512 SMARCE1Q969G3 411 aa18.22■□□□□ 0.51
RER1-202ENST00000378512 MKNK1Q9BUB5 465 aa18.22■□□□□ 0.51
RER1-202ENST00000378512 NME7Q9Y5B8 376 aa18.22■□□□□ 0.51
RER1-202ENST00000378512 KINO60870 393 aaKnown RBP18.21■□□□□ 0.51
RER1-202ENST00000378512 PCSK1P29120 753 aa18.21■□□□□ 0.51
RER1-202ENST00000378512 ADAM9Q13443 819 aa18.21■□□□□ 0.51
RER1-202ENST00000378512 CFAP221Q4G0U5 840 aa18.21■□□□□ 0.51
RER1-202ENST00000378512 CEP135Q66GS9 1140 aa18.21■□□□□ 0.51
RER1-202ENST00000378512 CLEC17AQ6ZS10 378 aa18.21■□□□□ 0.51
RER1-202ENST00000378512 INTS8Q75QN2 995 aaKnown RBP18.21■□□□□ 0.51
RER1-202ENST00000378512 MTSS1LQ765P7 747 aa18.21■□□□□ 0.51
RER1-202ENST00000378512 PDZD4Q76G19 769 aaPredicted RBP18.21■□□□□ 0.51
RER1-202ENST00000378512 DNAJB7Q7Z6W7 309 aaPredicted RBP18.21■□□□□ 0.51
RER1-202ENST00000378512 ADSSL1Q8N142 457 aa18.21■□□□□ 0.51
RER1-202ENST00000378512 SYAP1Q96A49 352 aaPredicted RBP18.21■□□□□ 0.51
RER1-202ENST00000378512 ASAH2Q9NR71 780 aa18.21■□□□□ 0.51
RER1-202ENST00000378512 MTF2Q9Y483 593 aaPredicted RBP18.21■□□□□ 0.51
RER1-202ENST00000378512 PCDHB5Q9Y5E4 795 aa18.21■□□□□ 0.51
RER1-202ENST00000378512 TULP1O00294 542 aaPredicted RBP18.2■□□□□ 0.5
RER1-202ENST00000378512 HCRTO43612 131 aa18.2■□□□□ 0.5
RER1-202ENST00000378512 SOAT2O75908 522 aa18.2■□□□□ 0.5
RER1-202ENST00000378512 CD72P21854 359 aa18.2■□□□□ 0.5
RER1-202ENST00000378512 ACAT1P24752 427 aaKnown RBP18.2■□□□□ 0.5
RER1-202ENST00000378512 LMO2P25791 158 aa18.2■□□□□ 0.5
RER1-202ENST00000378512 PSMC2P35998 433 aaKnown RBP18.2■□□□□ 0.5
RER1-202ENST00000378512 VAMP7P51809 220 aa18.2■□□□□ 0.5
RER1-202ENST00000378512 CDR1P51861 262 aa18.2■□□□□ 0.5
RER1-202ENST00000378512 UBE2HP62256 183 aa18.2■□□□□ 0.5
RER1-202ENST00000378512 TRPC3Q13507 836 aa18.2■□□□□ 0.5
RER1-202ENST00000378512 WDR72Q3MJ13 1102 aa18.2■□□□□ 0.5
RER1-202ENST00000378512 CYP4A22Q5TCH4 519 aa18.2■□□□□ 0.5
RER1-202ENST00000378512 TANGO2Q6ICL3 276 aa18.2■□□□□ 0.5
RER1-202ENST00000378512 PHLDB3Q6NSJ2 640 aa18.2■□□□□ 0.5
RER1-202ENST00000378512 SV2AQ7L0J3 742 aa18.2■□□□□ 0.5
RER1-202ENST00000378512 PJA1Q8NG27 643 aa18.2■□□□□ 0.5
RER1-202ENST00000378512 FUBP3Q96I24 572 aaKnown RBP eCLIP18.2■□□□□ 0.5
RER1-202ENST00000378512 GTF3C4Q9UKN8 822 aa18.2■□□□□ 0.5
RER1-202ENST00000378512 CDH9Q9ULB4 789 aa18.2■□□□□ 0.5
RER1-202ENST00000378512 SIT1Q9Y3P8 196 aa18.2■□□□□ 0.5
RER1-202ENST00000378512 ANAPC1Q9H1A4 1944 aa18.19■□□□□ 0.5
RER1-202ENST00000378512 COL4A2P08572 1712 aa18.19■□□□□ 0.5
RER1-202ENST00000378512 MYBPHLA2RUH7 354 aa18.19■□□□□ 0.5
RER1-202ENST00000378512 GJA1P17302 382 aa18.19■□□□□ 0.5
RER1-202ENST00000378512 BMP6P22004 513 aa18.19■□□□□ 0.5
RER1-202ENST00000378512 FCARP24071 287 aa18.19■□□□□ 0.5
RER1-202ENST00000378512 NCOA4Q13772 614 aa18.19■□□□□ 0.5
RER1-202ENST00000378512 FOXR2Q6PJQ5 311 aa18.19■□□□□ 0.5
RER1-202ENST00000378512 GAREM2Q75VX8 874 aa18.19■□□□□ 0.5
RER1-202ENST00000378512 ITIH5Q86UX2 942 aa18.19■□□□□ 0.5
RER1-202ENST00000378512 FAM186BQ8IYM0 893 aa18.19■□□□□ 0.5
RER1-202ENST00000378512 SHKBP1Q8TBC3 707 aa18.19■□□□□ 0.5
RER1-202ENST00000378512 ZSWIM3Q96MP5 696 aa18.19■□□□□ 0.5
RER1-202ENST00000378512 MRPL45Q9BRJ2 306 aaKnown RBP18.19■□□□□ 0.5
RER1-202ENST00000378512 TRPV4Q9HBA0 871 aa18.19■□□□□ 0.5
RER1-202ENST00000378512 ZNF334Q9HCZ1 680 aaPredicted RBP18.19■□□□□ 0.5
RER1-202ENST00000378512 CRTAC1Q9NQ79 661 aa18.19■□□□□ 0.5
RER1-202ENST00000378512 ABI2Q9NYB9 513 aaPredicted RBP18.19■□□□□ 0.5
RER1-202ENST00000378512 MAN1B1Q9UKM7 699 aa18.19■□□□□ 0.5
RER1-202ENST00000378512 R4GN57 208 aa18.19■□□□□ 0.5
RER1-202ENST00000378512 ZNF638Q14966 1978 aaKnown RBP18.19■□□□□ 0.5
RER1-202ENST00000378512 KIF26AQ9ULI4 1882 aaPredicted RBP18.19■□□□□ 0.5
RER1-202ENST00000378512 WDR87Q6ZQQ6 2873 aa18.18■□□□□ 0.5
RER1-202ENST00000378512 ECI2O75521 394 aa18.18■□□□□ 0.5
RER1-202ENST00000378512 ASS1P00966 412 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms