RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 STKLD1Q8NE28 680 aa12.5□□□□□ -0.41
DEPDC4-202ENST00000378244 GPR152Q8TDT2 470 aa12.5□□□□□ -0.41
DEPDC4-202ENST00000378244 PLEKHA4Q9H4M7 779 aa12.5□□□□□ -0.41
DEPDC4-202ENST00000378244 FAM49BQ9NUQ9 324 aa12.5□□□□□ -0.41
DEPDC4-202ENST00000378244 LIMA1Q9UHB6 759 aaKnown RBP12.5□□□□□ -0.41
DEPDC4-202ENST00000378244 AFF4Q9UHB7 1163 aaKnown RBP12.5□□□□□ -0.41
DEPDC4-202ENST00000378244 FBXW11Q9UKB1 542 aa12.5□□□□□ -0.41
DEPDC4-202ENST00000378244 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.5□□□□□ -0.41
DEPDC4-202ENST00000378244 PMM2O15305 246 aa12.5□□□□□ -0.41
DEPDC4-202ENST00000378244 CCL16O15467 120 aa12.5□□□□□ -0.41
DEPDC4-202ENST00000378244 CAVIN2O95810 425 aa12.5□□□□□ -0.41
DEPDC4-202ENST00000378244 PTPN1P18031 435 aaKnown RBP12.5□□□□□ -0.41
DEPDC4-202ENST00000378244 CYP2F1P24903 491 aa12.5□□□□□ -0.41
DEPDC4-202ENST00000378244 TPM4P67936 248 aa12.5□□□□□ -0.41
DEPDC4-202ENST00000378244 KCNMA1Q12791 1236 aa12.5□□□□□ -0.41
DEPDC4-202ENST00000378244 PPM1LQ5SGD2 360 aa12.5□□□□□ -0.41
DEPDC4-202ENST00000378244 TPGS2Q68CL5 300 aa12.5□□□□□ -0.41
DEPDC4-202ENST00000378244 APTXQ7Z2E3 356 aaKnown RBP12.5□□□□□ -0.41
DEPDC4-202ENST00000378244 B3GALNT2Q8NCR0 500 aa12.5□□□□□ -0.41
DEPDC4-202ENST00000378244 PCED1BQ96HM7 432 aa12.5□□□□□ -0.41
DEPDC4-202ENST00000378244 PCMTD1Q96MG8 357 aaPredicted RBP12.5□□□□□ -0.41
DEPDC4-202ENST00000378244 FAM207AQ9NSI2 230 aaPredicted RBP12.5□□□□□ -0.41
DEPDC4-202ENST00000378244 CDH9Q9ULB4 789 aa12.5□□□□□ -0.41
DEPDC4-202ENST00000378244 CLDN5O00501 218 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 SP100P23497 879 aaPredicted RBP12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 KCNQ1P51787 676 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 ZNF445P59923 1031 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 COL19A1Q14993 1142 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 FKBP15Q5T1M5 1219 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 SDHAF4Q5VUM1 108 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 TMEM270Q6UE05 265 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 TMEM184AQ6ZMB5 413 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 SPATA2LQ8IUW3 424 aaPredicted RBP12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 WHAMMQ8TF30 809 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 MYLPFQ96A32 169 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 NT5C1AQ9BXI3 368 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 OXCT2Q9BYC2 517 aaPredicted RBP12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 CYP3A43Q9HB55 503 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 PIDD1Q9HB75 910 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 FSD2A1L4K1 749 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 LRRC10BA6NIK2 292 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 TEX33O43247 280 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 CILPO75339 1184 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 ZMYND10O75800 440 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 CALCAP01258 141 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 CCDC130P13994 396 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 BDNFP23560 247 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 USP8P40818 1118 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 SYCP1Q15431 976 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 GPIHBP1Q8IV16 184 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 SCN4BQ8IWT1 228 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 MYCBPAPQ8TBZ2 947 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 MSLNLQ96KJ4 702 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 TNIP3Q96KP6 325 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 HEXIM2Q96MH2 286 aaKnown RBP12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 KREMEN1Q96MU8 473 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 NAP1L5Q96NT1 182 aaPredicted RBP12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 ELOVL4Q9GZR5 314 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 THEGQ9P2T0 379 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 APEX2Q9UBZ4 518 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 DPP7Q9UHL4 492 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 PCDHB5Q9Y5E4 795 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 PCDHB4Q9Y5E5 795 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 INSL5Q9Y5Q6 135 aa12.49□□□□□ -0.41
DEPDC4-202ENST00000378244 GTPBP10A4D1E9 387 aaKnown RBP12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 LRG1P02750 347 aa12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 PNMA6AP0CW24 399 aaPredicted RBP12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 KRT5P13647 590 aa12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 TBXAS1P24557 533 aaPredicted RBP12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 GPR15P49685 360 aa12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 TWF1Q12792 350 aa12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 RAPGEF1Q13905 1077 aa12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 NFE2Q16621 373 aaPredicted RBP12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 DDR2Q16832 855 aa12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 TCEAL8Q8IYN2 117 aa12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 PKMYT1Q99640 499 aa12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 MED10Q9BTT4 135 aa12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 LSM14BQ9BX40 385 aaKnown RBP12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 SFXN1Q9H9B4 322 aa12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 HCFC1R1Q9NWW0 138 aa12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 CD207Q9UJ71 328 aa12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 AJAP1Q9UKB5 411 aaPredicted RBP12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 COG5Q9UP83 839 aa12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 TSC2P49815 1807 aa12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 PLXNA3P51805 1871 aa12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 LGALS16A8MUM7 142 aa12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 HOXB8P17481 243 aaPredicted RBP12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 ADORA2BP29275 332 aa12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 INCA1Q0VD86 236 aa12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 CES5AQ6NT32 575 aa12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 FAM171BQ6P995 826 aa12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 ELMSAN1Q6PJG2 1045 aa12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 CCDC149Q6ZUS6 474 aa12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 SMRP1Q8NCR6 262 aa12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 SPATA18Q8TC71 538 aa12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 SLC2A14Q8TDB8 520 aa12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 GIPC2Q8TF65 315 aa12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 SMG7Q92540 1137 aaKnown RBP12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 ZNF518BQ9C0D4 1074 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms