RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 ICA1LQ8NDH6 482 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 SPDYE1Q8NFV5 336 aaPredicted RBP15.7■□□□□ 0.1
NPHP4-201ENST00000378156 AENQ8WTP8 325 aaKnown RBP15.7■□□□□ 0.1
NPHP4-201ENST00000378156 HAS1Q92839 578 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 ASIC4Q96FT7 647 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 KLF6Q99612 283 aaPredicted RBP15.7■□□□□ 0.1
NPHP4-201ENST00000378156 WARS2Q9UGM6 360 aaKnown RBP15.7■□□□□ 0.1
NPHP4-201ENST00000378156 SNX5Q9Y5X3 404 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 A0A0A6YYK5 440 aaPredicted RBP15.7■□□□□ 0.1
NPHP4-201ENST00000378156 NVLO15381 856 aaKnown RBP15.7■□□□□ 0.1
NPHP4-201ENST00000378156 PJA2O43164 708 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 CCDC22O60826 627 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 ZC3H11AO75152 810 aaKnown RBP eCLIP15.7■□□□□ 0.1
NPHP4-201ENST00000378156 GPD1P21695 349 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 CASP5P51878 434 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 DCAF6Q58WW2 860 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 LRRC55Q6ZSA7 311 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 LCA5Q86VQ0 697 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 SPATA18Q8TC71 538 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 OPTNQ96CV9 577 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 MTMR12Q9C0I1 747 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 DPP3Q9NY33 737 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.7■□□□□ 0.14e-6■■■■■ 28.1
NPHP4-201ENST00000378156 NFAT5O94916 1531 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 C3orf70A6NLC5 250 aaPredicted RBP15.7■□□□□ 0.1
NPHP4-201ENST00000378156 NEMP1O14524 444 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 PBX1P40424 430 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 FCGRTP55899 365 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 FRA10AC1Q70Z53 315 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 OTOP1Q7RTM1 612 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 RNF180Q86T96 592 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 LRRC34Q8IZ02 419 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 ALKBH8Q96BT7 664 aaKnown RBP15.7■□□□□ 0.1
NPHP4-201ENST00000378156 SCHIP1Q9P0W5 487 aaPredicted RBP15.7■□□□□ 0.1
NPHP4-201ENST00000378156 FAM8A1Q9UBU6 413 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 SUN2Q9UH99 717 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 CCT8L1PA6NM43 557 aa15.69■□□□□ 0.1
NPHP4-201ENST00000378156 UPP2O95045 317 aa15.69■□□□□ 0.1
NPHP4-201ENST00000378156 SERPINB4P48594 390 aa15.69■□□□□ 0.1
NPHP4-201ENST00000378156 IRF2BP1Q8IU81 584 aa15.69■□□□□ 0.1
NPHP4-201ENST00000378156 DCP1BQ8IZD4 617 aaKnown RBP15.69■□□□□ 0.1
NPHP4-201ENST00000378156 TSEN2Q8NCE0 465 aaKnown RBP15.69■□□□□ 0.1
NPHP4-201ENST00000378156 CATSPER1Q8NEC5 780 aa15.69■□□□□ 0.1
NPHP4-201ENST00000378156 RMDN1Q96DB5 314 aa15.69■□□□□ 0.1
NPHP4-201ENST00000378156 SMYD3Q9H7B4 428 aa15.69■□□□□ 0.1
NPHP4-201ENST00000378156 LRRC4BQ9NT99 713 aa15.69■□□□□ 0.1
NPHP4-201ENST00000378156 SNX2O60749 519 aa15.69■□□□□ 0.1
NPHP4-201ENST00000378156 GOLGA7BQ2TAP0 167 aa15.69■□□□□ 0.1
NPHP4-201ENST00000378156 ACCSLQ4AC99 568 aa15.69■□□□□ 0.1
NPHP4-201ENST00000378156 GLRA4Q5JXX5 417 aa15.69■□□□□ 0.1
NPHP4-201ENST00000378156 FOXR1Q6PIV2 292 aa15.69■□□□□ 0.1
NPHP4-201ENST00000378156 CD302Q8IX05 232 aa15.69■□□□□ 0.1
NPHP4-201ENST00000378156 CNPY4Q8N129 248 aa15.69■□□□□ 0.1
NPHP4-201ENST00000378156 KIF2BQ8N4N8 673 aa15.69■□□□□ 0.1
NPHP4-201ENST00000378156 ING2Q9H160 280 aa15.69■□□□□ 0.1
NPHP4-201ENST00000378156 FAM198AQ9UFP1 575 aa15.69■□□□□ 0.1
NPHP4-201ENST00000378156 SMG5Q9UPR3 1016 aaKnown RBP15.69■□□□□ 0.1
NPHP4-201ENST00000378156 SLC12A3P55017 1021 aa15.69■□□□□ 0.1
NPHP4-201ENST00000378156 NSUN2Q08J23 767 aaKnown RBP eCLIP15.69■□□□□ 0.1
NPHP4-201ENST00000378156 KIZQ2M2Z5 673 aa15.69■□□□□ 0.1
NPHP4-201ENST00000378156 KLK14Q9P0G3 267 aa15.69■□□□□ 0.1
NPHP4-201ENST00000378156 PPME1Q9Y570 386 aa15.69■□□□□ 0.1
NPHP4-201ENST00000378156 TCHHQ07283 1943 aa15.69■□□□□ 0.1
NPHP4-201ENST00000378156 RANBP1P43487 201 aa15.69■□□□□ 0.1
NPHP4-201ENST00000378156 OR1G1P47890 313 aa15.69■□□□□ 0.1
NPHP4-201ENST00000378156 OAZ1P54368 228 aa15.69■□□□□ 0.1
NPHP4-201ENST00000378156 CCDC92Q53HC0 331 aaPredicted RBP15.69■□□□□ 0.1
NPHP4-201ENST00000378156 CYP4A22Q5TCH4 519 aa15.69■□□□□ 0.1
NPHP4-201ENST00000378156 ELMO3Q96BJ8 720 aa15.69■□□□□ 0.1
NPHP4-201ENST00000378156 SGSM3Q96HU1 749 aa15.69■□□□□ 0.1
NPHP4-201ENST00000378156 FAM161BQ96MY7 647 aa15.69■□□□□ 0.1
NPHP4-201ENST00000378156 FOXP3Q9BZS1 431 aa15.69■□□□□ 0.1
NPHP4-201ENST00000378156 PRDM4Q9UKN5 801 aa15.69■□□□□ 0.1
NPHP4-201ENST00000378156 REXO2Q9Y3B8 237 aaKnown RBP15.69■□□□□ 0.1
NPHP4-201ENST00000378156 RRM1P23921 792 aa15.68■□□□□ 0.1
NPHP4-201ENST00000378156 HDAC4P56524 1084 aa15.68■□□□□ 0.1
NPHP4-201ENST00000378156 BOLA3Q53S33 107 aa15.68■□□□□ 0.1
NPHP4-201ENST00000378156 MKL1Q969V6 931 aa15.68■□□□□ 0.1
NPHP4-201ENST00000378156 TRPV6Q9H1D0 765 aa15.68■□□□□ 0.1
NPHP4-201ENST00000378156 SARS2Q9NP81 518 aaKnown RBP15.68■□□□□ 0.1
NPHP4-201ENST00000378156 GTSE1Q9NYZ3 720 aa15.68■□□□□ 0.1
NPHP4-201ENST00000378156 CHMP2BQ9UQN3 213 aa15.68■□□□□ 0.1
NPHP4-201ENST00000378156 ARHGDIAP52565 204 aa15.68■□□□□ 0.1
NPHP4-201ENST00000378156 SLC30A9Q6PML9 568 aa15.68■□□□□ 0.1
NPHP4-201ENST00000378156 RGS9BPQ6ZS82 235 aa15.68■□□□□ 0.1
NPHP4-201ENST00000378156 NIPA1Q7RTP0 329 aa15.68■□□□□ 0.1
NPHP4-201ENST00000378156 C4orf32Q8N8J7 132 aa15.68■□□□□ 0.1
NPHP4-201ENST00000378156 CDC26Q8NHZ8 85 aa15.68■□□□□ 0.1
NPHP4-201ENST00000378156 NKX2-3Q8TAU0 364 aa15.68■□□□□ 0.1
NPHP4-201ENST00000378156 DDX50Q9BQ39 737 aaKnown RBP15.68■□□□□ 0.1
NPHP4-201ENST00000378156 MMTAG2Q9BU76 263 aaKnown RBP15.68■□□□□ 0.1
NPHP4-201ENST00000378156 NPHS2Q9NP85 383 aa15.68■□□□□ 0.1
NPHP4-201ENST00000378156 FARP1Q9Y4F1 1045 aaPredicted RBP15.68■□□□□ 0.1
NPHP4-201ENST00000378156 FAM200BP0CF97 657 aa15.68■□□□□ 0.1
NPHP4-201ENST00000378156 GZMAP12544 262 aa15.68■□□□□ 0.1
NPHP4-201ENST00000378156 ERFP50548 548 aa15.68■□□□□ 0.1
NPHP4-201ENST00000378156 SOX10P56693 466 aa15.68■□□□□ 0.1
NPHP4-201ENST00000378156 RFX8Q6ZV50 586 aa15.68■□□□□ 0.1
NPHP4-201ENST00000378156 SV2AQ7L0J3 742 aa15.68■□□□□ 0.1
NPHP4-201ENST00000378156 RASSF3Q86WH2 238 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms