RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 CASP4P49662 377 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 PSEN2P49810 448 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 ERFP50548 548 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 SLC26A7Q8TE54 656 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 HASPINQ8TF76 798 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 MS4A14Q96JA4 679 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 MRPL17Q9NRX2 175 aaKnown RBP11.3□□□□□ -0.6
HIF3A-205ENST00000377670 FHOD1Q9Y613 1164 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 SLC30A1Q9Y6M5 507 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 TARSL2A2RTX5 802 aaKnown RBP11.3□□□□□ -0.6
HIF3A-205ENST00000377670 GRID2IPA4D2P6 1211 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 TOMM70O94826 608 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 HMGCRP04035 888 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 KLRC1P26715 233 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 RGS7P49802 495 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 SGSM1Q2NKQ1 1148 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 PRR23CQ6ZRP0 262 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 TTC13Q8NBP0 860 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 MAGEB10Q96LZ2 347 aaPredicted RBP11.3□□□□□ -0.6
HIF3A-205ENST00000377670 APBA2Q99767 749 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 APOL5Q9BWW9 433 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 ING2Q9H160 280 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 LIMA1Q9UHB6 759 aaKnown RBP11.3□□□□□ -0.6
HIF3A-205ENST00000377670 LZTS1Q9Y250 596 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 USP20Q9Y2K6 914 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 PPP1R37O75864 691 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 KRT37O76014 449 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 GYPCP04921 128 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 PLEKP08567 350 aaPredicted RBP11.3□□□□□ -0.6
HIF3A-205ENST00000377670 ZFXP17010 805 aaPredicted RBP11.3□□□□□ -0.6
HIF3A-205ENST00000377670 RPA1P27694 616 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 GLRA4Q5JXX5 417 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 PDXDC1Q6P996 788 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 ANO5Q75V66 913 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 DNAAF5Q86Y56 855 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 ATPAF2Q8N5M1 289 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 TC2NQ8N9U0 490 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 TTC8Q8TAM2 541 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 RIT2Q99578 217 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 LRRC1Q9BTT6 524 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 SYCE1LA8MT33 242 aa11.29□□□□□ -0.6
HIF3A-205ENST00000377670 PPP1R12AO14974 1030 aaPredicted RBP11.29□□□□□ -0.6
HIF3A-205ENST00000377670 CSDE1O75534 798 aaKnown RBP11.29□□□□□ -0.6
HIF3A-205ENST00000377670 ZNF189O75820 626 aaPredicted RBP11.29□□□□□ -0.6
HIF3A-205ENST00000377670 VCPP55072 806 aaKnown RBP11.29□□□□□ -0.6
HIF3A-205ENST00000377670 FSCBQ5H9T9 825 aa11.29□□□□□ -0.6
HIF3A-205ENST00000377670 SLC30A9Q6PML9 568 aa11.29□□□□□ -0.6
HIF3A-205ENST00000377670 SLAIN1Q8ND83 568 aa11.29□□□□□ -0.6
HIF3A-205ENST00000377670 RAPGEF5Q92565 580 aa11.29□□□□□ -0.6
HIF3A-205ENST00000377670 PNMA5Q96PV4 448 aa11.29□□□□□ -0.6
HIF3A-205ENST00000377670 NUP85Q9BW27 656 aa11.29□□□□□ -0.6
HIF3A-205ENST00000377670 TTC7AQ9ULT0 858 aaPredicted RBP11.29□□□□□ -0.6
HIF3A-205ENST00000377670 A0A087X0B3 334 aa11.29□□□□□ -0.6
HIF3A-205ENST00000377670 SLC15A5A6NIM6 579 aa11.29□□□□□ -0.6
HIF3A-205ENST00000377670 ZBTB39O15060 712 aa11.29□□□□□ -0.6
HIF3A-205ENST00000377670 PYGBP11216 843 aa11.29□□□□□ -0.6
HIF3A-205ENST00000377670 ACADSBP45954 432 aa11.29□□□□□ -0.6
HIF3A-205ENST00000377670 SLC26A2P50443 739 aa11.29□□□□□ -0.6
HIF3A-205ENST00000377670 IQSEC1Q6DN90 963 aa11.29□□□□□ -0.6
HIF3A-205ENST00000377670 HERC6Q8IVU3 1022 aa11.29□□□□□ -0.6
HIF3A-205ENST00000377670 NT5C1AQ9BXI3 368 aa11.29□□□□□ -0.6
HIF3A-205ENST00000377670 CYP26B1Q9NR63 512 aa11.29□□□□□ -0.6
HIF3A-205ENST00000377670 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.29□□□□□ -0.6
HIF3A-205ENST00000377670 NCAM2O15394 837 aa11.29□□□□□ -0.6
HIF3A-205ENST00000377670 CLCN3P51790 818 aa11.29□□□□□ -0.6
HIF3A-205ENST00000377670 ARL4CP56559 192 aa11.29□□□□□ -0.6
HIF3A-205ENST00000377670 PPIGQ13427 754 aaKnown RBP eCLIP11.29□□□□□ -0.6
HIF3A-205ENST00000377670 TRIM59Q8IWR1 403 aa11.29□□□□□ -0.6
HIF3A-205ENST00000377670 CARNMT1Q8N4J0 409 aa11.29□□□□□ -0.6
HIF3A-205ENST00000377670 DNERQ8NFT8 737 aa11.29□□□□□ -0.6
HIF3A-205ENST00000377670 DNAJB3Q8WWF6 145 aa11.29□□□□□ -0.6
HIF3A-205ENST00000377670 AHCYL2Q96HN2 611 aaKnown RBP11.29□□□□□ -0.6
HIF3A-205ENST00000377670 WNK4Q96J92 1243 aa11.29□□□□□ -0.6
HIF3A-205ENST00000377670 PDXKO00764 312 aa11.29□□□□□ -0.6
HIF3A-205ENST00000377670 ASS1P00966 412 aaKnown RBP11.29□□□□□ -0.6
HIF3A-205ENST00000377670 SGCGQ13326 291 aa11.29□□□□□ -0.6
HIF3A-205ENST00000377670 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.29□□□□□ -0.6
HIF3A-205ENST00000377670 CATSPERBQ9H7T0 1116 aa11.29□□□□□ -0.6
HIF3A-205ENST00000377670 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.29□□□□□ -0.6
HIF3A-205ENST00000377670 ATMINO43313 823 aaPredicted RBP11.29□□□□□ -0.6
HIF3A-205ENST00000377670 FXR2P51116 673 aaKnown RBP eCLIP11.29□□□□□ -0.6
HIF3A-205ENST00000377670 BEX3Q00994 111 aa11.29□□□□□ -0.6
HIF3A-205ENST00000377670 HABP4Q5JVS0 413 aaKnown RBP11.29□□□□□ -0.6
HIF3A-205ENST00000377670 RABGAP1LQ5R372 815 aa11.29□□□□□ -0.6
HIF3A-205ENST00000377670 TRIM72Q6ZMU5 477 aa11.29□□□□□ -0.6
HIF3A-205ENST00000377670 CPA5Q8WXQ8 436 aa11.29□□□□□ -0.6
HIF3A-205ENST00000377670 CCT8L2Q96SF2 557 aa11.29□□□□□ -0.6
HIF3A-205ENST00000377670 FAM49BQ9NUQ9 324 aa11.29□□□□□ -0.6
HIF3A-205ENST00000377670 SUPT3HO75486 399 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 SLC2A3P11169 496 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 CYP11B2P19099 503 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 BCAR1P56945 870 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 CREMQ03060 361 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 GRIK4Q16099 956 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 SYCP2LQ5T4T6 812 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 TMEM154Q6P9G4 183 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 KDELC2Q7Z4H8 507 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 DTX3LQ8TDB6 740 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 TCP11X1B4DZS4 312 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 F5H5T6 163 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms