RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	CD52	P31358	61 aa		12.35	□□□□□ -0.43
LMO7-204	ENST00000377499	SF3A3	Q12874	501 aa	Known RBP eCLIP	12.35	□□□□□ -0.43	3e-7	■■□□□ 13.7
LMO7-204	ENST00000377499	PAK2	Q13177	524 aa		12.35	□□□□□ -0.43
LMO7-204	ENST00000377499	PAPD7	Q5XG87	772 aa	Known RBP	12.35	□□□□□ -0.43
LMO7-204	ENST00000377499	LLGL2	Q6P1M3	1020 aa		12.35	□□□□□ -0.43
LMO7-204	ENST00000377499	DCUN1D2	Q6PH85	259 aa		12.35	□□□□□ -0.43
LMO7-204	ENST00000377499	FAM228A	Q86W67	206 aa		12.35	□□□□□ -0.43
LMO7-204	ENST00000377499	DYDC1	Q8WWB3	177 aa		12.35	□□□□□ -0.43
LMO7-204	ENST00000377499	RABGGTA	Q92696	567 aa		12.35	□□□□□ -0.43
LMO7-204	ENST00000377499	LPP	Q93052	612 aa		12.35	□□□□□ -0.43
LMO7-204	ENST00000377499	CXCL16	Q9H2A7	254 aa		12.35	□□□□□ -0.43
LMO7-204	ENST00000377499	SIX4	Q9UIU6	781 aa		12.35	□□□□□ -0.43
LMO7-204	ENST00000377499	TRIP12	Q14669	1992 aa	Predicted RBP	12.35	□□□□□ -0.43
LMO7-204	ENST00000377499	KBTBD13	C9JR72	458 aa		12.35	□□□□□ -0.43
LMO7-204	ENST00000377499	PIK3R2	O00459	728 aa		12.35	□□□□□ -0.43
LMO7-204	ENST00000377499	ADAMTS4	O75173	837 aa		12.35	□□□□□ -0.43
LMO7-204	ENST00000377499	GZMA	P12544	262 aa		12.35	□□□□□ -0.43
LMO7-204	ENST00000377499	ITGA4	P13612	1032 aa		12.35	□□□□□ -0.43
LMO7-204	ENST00000377499	AXL	P30530	894 aa		12.35	□□□□□ -0.43
LMO7-204	ENST00000377499	CLEC16A	Q2KHT3	1053 aa		12.35	□□□□□ -0.43
LMO7-204	ENST00000377499	ZFP42	Q96MM3	310 aa		12.35	□□□□□ -0.43
LMO7-204	ENST00000377499	IPP	Q9Y573	584 aa		12.35	□□□□□ -0.43
LMO7-204	ENST00000377499	PTCH2	Q9Y6C5	1203 aa		12.35	□□□□□ -0.43
LMO7-204	ENST00000377499	ZSCAN9	O15535	394 aa	Predicted RBP	12.35	□□□□□ -0.43
LMO7-204	ENST00000377499	PDGFRB	P09619	1106 aa		12.35	□□□□□ -0.43
LMO7-204	ENST00000377499	RRM1	P23921	792 aa		12.35	□□□□□ -0.43
LMO7-204	ENST00000377499	MPP3	Q13368	585 aa		12.35	□□□□□ -0.43
LMO7-204	ENST00000377499	CD302	Q8IX05	232 aa		12.35	□□□□□ -0.43
LMO7-204	ENST00000377499	KLHL7	Q8IXQ5	586 aa		12.35	□□□□□ -0.43
LMO7-204	ENST00000377499	C1orf131	Q8NDD1	294 aa	Known RBP	12.35	□□□□□ -0.43
LMO7-204	ENST00000377499	KCNN1	Q92952	543 aa		12.35	□□□□□ -0.43
LMO7-204	ENST00000377499	ITGA11	Q9UKX5	1188 aa		12.35	□□□□□ -0.43
LMO7-204	ENST00000377499	ZMYND10	O75800	440 aa		12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	ZNF211	Q13398	564 aa	Predicted RBP	12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	ERICH1	Q86X53	443 aa		12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	NOA1	Q8NC60	698 aa	Known RBP	12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	TMEM35B	Q8NCS4	154 aa		12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	NSMCE1	Q8WV22	266 aa		12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	WNT8B	Q93098	351 aa		12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	ZMAT2	Q96NC0	199 aa	Known RBP	12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	PNKP	Q96T60	521 aa		12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	TSC22D3	Q99576	134 aa		12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	TRPV6	Q9H1D0	765 aa		12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	C2CD2	Q9Y426	696 aa		12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	MAP2K7	O14733	419 aa		12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	GPR182	O15218	404 aa		12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	ACO1	P21399	889 aa	Known RBP	12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	AMPD2	Q01433	879 aa		12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	IFT88	Q13099	833 aa		12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	BEND6	Q5SZJ8	279 aa	Predicted RBP	12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	ARHGAP22	Q7Z5H3	698 aa		12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	TAX1BP1	Q86VP1	789 aa		12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	ZNF677	Q86XU0	584 aa		12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	IQCG	Q9H095	443 aa	Known RBP	12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	PAPOLB	Q9NRJ5	636 aa	Known RBP	12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	UBQLN1	Q9UMX0	589 aa	Known RBP	12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	PCDHGC5	Q9Y5F6	944 aa		12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	CEP350	Q5VT06	3117 aa		12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	PPEF2	O14830	753 aa		12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	MED7	O43513	233 aa		12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	PAPOLA	P51003	745 aa	Known RBP	12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	IRAK1	P51617	712 aa		12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	ATN1	P54259	1190 aa	Predicted RBP	12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	ADAM17	P78536	824 aa		12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	C16orf87	Q6PH81	154 aa		12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	UBL4B	Q8N7F7	174 aa		12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	ARRDC4	Q8NCT1	418 aa		12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	FAM76A	Q8TAV0	307 aa		12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	UBA3	Q8TBC4	463 aa		12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	FAM81A	Q8TBF8	368 aa		12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	KCNV2	Q8TDN2	545 aa		12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	GAD1	Q99259	594 aa		12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	XYLT2	Q9H1B5	865 aa		12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	ISCU	Q9H1K1	167 aa		12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	SLC40A1	Q9NP59	571 aa		12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	FAM49B	Q9NUQ9	324 aa		12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	ALG6	Q9Y672	507 aa		12.34	□□□□□ -0.43
LMO7-204	ENST00000377499	hCG_2014768	A0A024R1R8	64 aa		12.33	□□□□□ -0.44
LMO7-204	ENST00000377499	SMIM28	A0A1B0GU29	152 aa		12.33	□□□□□ -0.44
LMO7-204	ENST00000377499		A8MXQ7	604 aa		12.33	□□□□□ -0.44
LMO7-204	ENST00000377499		M0QYV0	167 aa		12.33	□□□□□ -0.44
LMO7-204	ENST00000377499	GJB6	O95452	261 aa		12.33	□□□□□ -0.44
LMO7-204	ENST00000377499	MLH1	P40692	756 aa		12.33	□□□□□ -0.44
LMO7-204	ENST00000377499	ASPA	P45381	313 aa		12.33	□□□□□ -0.44
LMO7-204	ENST00000377499	BRD3	Q15059	726 aa		12.33	□□□□□ -0.44
LMO7-204	ENST00000377499	MEI1	Q5TIA1	1274 aa		12.33	□□□□□ -0.44
LMO7-204	ENST00000377499	AP1M1	Q9BXS5	423 aa		12.33	□□□□□ -0.44
LMO7-204	ENST00000377499	SNX25	Q9H3E2	840 aa		12.33	□□□□□ -0.44
LMO7-204	ENST00000377499	CACNG4	Q9UBN1	327 aa		12.33	□□□□□ -0.44
LMO7-204	ENST00000377499	PADI3	Q9ULW8	664 aa		12.33	□□□□□ -0.44
LMO7-204	ENST00000377499	COG5	Q9UP83	839 aa		12.33	□□□□□ -0.44
LMO7-204	ENST00000377499	ZSWIM8	A7E2V4	1837 aa		12.33	□□□□□ -0.44
LMO7-204	ENST00000377499	ATIC	P31939	592 aa		12.33	□□□□□ -0.44
LMO7-204	ENST00000377499	NDST1	P52848	882 aa		12.33	□□□□□ -0.44
LMO7-204	ENST00000377499	PCBP1	Q15365	356 aa	Known RBP eCLIP	12.33	□□□□□ -0.44
LMO7-204	ENST00000377499	CYP4A22	Q5TCH4	519 aa		12.33	□□□□□ -0.44
LMO7-204	ENST00000377499	TRIM72	Q6ZMU5	477 aa		12.33	□□□□□ -0.44
LMO7-204	ENST00000377499	SLAIN1	Q8ND83	568 aa		12.33	□□□□□ -0.44
LMO7-204	ENST00000377499	SNX27	Q96L92	541 aa		12.33	□□□□□ -0.44
LMO7-204	ENST00000377499	DEFB118	Q96PH6	123 aa		12.33	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms