RNA–Protein interactions for RNA: ENST00000377475.7

SEC23B-204, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-204ENST00000377475 IL1RAPL1Q9NZN1 696 aa12.14□□□□□ -0.47
SEC23B-204ENST00000377475 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.14□□□□□ -0.47
SEC23B-204ENST00000377475 ATXN2Q99700 1313 aaKnown RBP12.14□□□□□ -0.47
SEC23B-204ENST00000377475 B2RBV5 119 aa12.14□□□□□ -0.47
SEC23B-204ENST00000377475 DCTN3O75935 186 aa12.14□□□□□ -0.47
SEC23B-204ENST00000377475 RFC5P40937 340 aa12.14□□□□□ -0.47
SEC23B-204ENST00000377475 CRADDP78560 199 aa12.14□□□□□ -0.47
SEC23B-204ENST00000377475 CNTN2Q02246 1040 aa12.14□□□□□ -0.47
SEC23B-204ENST00000377475 PTK7Q13308 1070 aa12.14□□□□□ -0.47
SEC23B-204ENST00000377475 EMC2Q15006 297 aa12.14□□□□□ -0.47
SEC23B-204ENST00000377475 CCNG2Q16589 344 aa12.14□□□□□ -0.47
SEC23B-204ENST00000377475 FNBP1LQ5T0N5 605 aa12.14□□□□□ -0.47
SEC23B-204ENST00000377475 RSPH3Q86UC2 560 aa12.14□□□□□ -0.47
SEC23B-204ENST00000377475 TRABD2AQ86V40 505 aa12.14□□□□□ -0.47
SEC23B-204ENST00000377475 BBOF1Q8ND07 529 aa12.14□□□□□ -0.47
SEC23B-204ENST00000377475 JOSD2Q8TAC2 188 aa12.14□□□□□ -0.47
SEC23B-204ENST00000377475 USP6NLQ92738 828 aa12.14□□□□□ -0.47
SEC23B-204ENST00000377475 HEXIM2Q96MH2 286 aaKnown RBP12.14□□□□□ -0.47
SEC23B-204ENST00000377475 PCMTD2Q9NV79 361 aa12.14□□□□□ -0.47
SEC23B-204ENST00000377475 UBE4BO95155 1302 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 CEP350Q5VT06 3117 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 CYB561D2O14569 222 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 ENTPD3O75355 529 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 RNF8O76064 485 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 IVDP26440 423 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 PHBP35232 272 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 ELK3P41970 407 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 ABCG1P45844 678 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 PTDSS1P48651 473 aaKnown RBP12.13□□□□□ -0.47
SEC23B-204ENST00000377475 ARL4CP56559 192 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 FAAP100Q0VG06 881 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 BIRC2Q13490 618 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 CRYMQ14894 314 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 ZNF699Q32M78 642 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 KHDC1Q4VXA5 237 aaKnown RBP12.13□□□□□ -0.47
SEC23B-204ENST00000377475 FAM102AQ5T9C2 384 aaPredicted RBP12.13□□□□□ -0.47
SEC23B-204ENST00000377475 IL31Q6EBC2 164 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 ALYREFQ86V81 257 aaKnown RBP12.13□□□□□ -0.47
SEC23B-204ENST00000377475 UNC45BQ8IWX7 931 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 ABRAQ8N0Z2 381 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 DNAJC9Q8WXX5 260 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 APOL6Q9BWW8 343 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 RANBP17Q9H2T7 1088 aaKnown RBP12.13□□□□□ -0.47
SEC23B-204ENST00000377475 MANSC1Q9H8J5 431 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 CYP26B1Q9NR63 512 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 PSMC3IPQ9P2W1 217 aaPredicted RBP12.13□□□□□ -0.47
SEC23B-204ENST00000377475 KIAA1551Q9HCM1 1747 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 MYPNQ86TC9 1320 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 COPEO14579 308 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 DNALI1O14645 258 aaPredicted RBP12.13□□□□□ -0.47
SEC23B-204ENST00000377475 PSAPP07602 524 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 GLRA2P23416 452 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 GPC3P51654 580 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 SARNPP82979 210 aaKnown RBP12.13□□□□□ -0.47
SEC23B-204ENST00000377475 KRT76Q01546 638 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 ZNF268Q14587 947 aaPredicted RBP12.13□□□□□ -0.47
SEC23B-204ENST00000377475 AMHR2Q16671 573 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 SH3PXD2AQ5TCZ1 1133 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 NCAPG2Q86XI2 1143 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 SLC9A9Q8IVB4 645 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 MAP4K3Q8IVH8 894 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 TMEM35BQ8NCS4 154 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 UCMAQ8WVF2 138 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 FAM151AQ8WW52 585 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 DDX1Q92499 740 aaKnown RBP12.13□□□□□ -0.47
SEC23B-204ENST00000377475 RBM41Q96IZ5 413 aaKnown RBP12.13□□□□□ -0.47
SEC23B-204ENST00000377475 ARL8BQ9NVJ2 186 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 KCND2Q9NZV8 630 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 IP6K2Q9UHH9 426 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 ZNF541Q9H0D2 1346 aa12.13□□□□□ -0.47
SEC23B-204ENST00000377475 TRIM49D1C9J1S8 452 aa12.12□□□□□ -0.47
SEC23B-204ENST00000377475 I3L4J1 428 aa12.12□□□□□ -0.47
SEC23B-204ENST00000377475 MCF2LO15068 1137 aa12.12□□□□□ -0.47
SEC23B-204ENST00000377475 KCNN4O15554 427 aa12.12□□□□□ -0.47
SEC23B-204ENST00000377475 LIASO43766 372 aa12.12□□□□□ -0.47
SEC23B-204ENST00000377475 PGM1P36871 562 aa12.12□□□□□ -0.47
SEC23B-204ENST00000377475 OGDHQ02218 1023 aa12.12□□□□□ -0.47
SEC23B-204ENST00000377475 NR1H3Q13133 447 aa12.12□□□□□ -0.47
SEC23B-204ENST00000377475 KBTBD12Q3ZCT8 623 aa12.12□□□□□ -0.47
SEC23B-204ENST00000377475 RASIP1Q5U651 963 aa12.12□□□□□ -0.47
SEC23B-204ENST00000377475 SESTD1Q86VW0 696 aa12.12□□□□□ -0.47
SEC23B-204ENST00000377475 ASAP3Q8TDY4 903 aa12.12□□□□□ -0.47
SEC23B-204ENST00000377475 MORC4Q8TE76 937 aa12.12□□□□□ -0.47
SEC23B-204ENST00000377475 PTPRN2Q92932 1015 aa12.12□□□□□ -0.47
SEC23B-204ENST00000377475 WRNIP1Q96S55 665 aa12.12□□□□□ -0.47
SEC23B-204ENST00000377475 CISHQ9NSE2 258 aa12.12□□□□□ -0.47
SEC23B-204ENST00000377475 SCINQ9Y6U3 715 aa12.12□□□□□ -0.47
SEC23B-204ENST00000377475 NOP56O00567 594 aaKnown RBP12.12□□□□□ -0.47
SEC23B-204ENST00000377475 P4HA2O15460 535 aa12.12□□□□□ -0.47
SEC23B-204ENST00000377475 GMPRP36959 345 aa12.12□□□□□ -0.47
SEC23B-204ENST00000377475 SLC1A1P43005 524 aa12.12□□□□□ -0.47
SEC23B-204ENST00000377475 PHKA2P46019 1235 aa12.12□□□□□ -0.47
SEC23B-204ENST00000377475 NOMO3P69849 1222 aa12.12□□□□□ -0.47
SEC23B-204ENST00000377475 FSTL1Q12841 308 aa12.12□□□□□ -0.47
SEC23B-204ENST00000377475 RAB6CQ53S08 254 aa12.12□□□□□ -0.47
SEC23B-204ENST00000377475 NIM1KQ8IY84 436 aa12.12□□□□□ -0.47
SEC23B-204ENST00000377475 CCHCR1Q8TD31 782 aa12.12□□□□□ -0.47
SEC23B-204ENST00000377475 TMEM120AQ9BXJ8 343 aa12.12□□□□□ -0.47
SEC23B-204ENST00000377475 RAB6CQ9H0N0 254 aa12.12□□□□□ -0.47
SEC23B-204ENST00000377475 PXMP2Q9NR77 195 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms