RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 ANKRD36BP1Q96IX9 119 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 GGA2Q9UJY4 613 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 SRRM3A6NNA2 597 aaPredicted RBP13.6□□□□□ -0.23
USP11-204ENST00000377107 MMP8P22894 467 aa13.6□□□□□ -0.23
USP11-204ENST00000377107 TGFB2P61812 414 aa13.6□□□□□ -0.23
USP11-204ENST00000377107 LAMTOR4Q0VGL1 99 aa13.6□□□□□ -0.23
USP11-204ENST00000377107 MMRN1Q13201 1228 aa13.6□□□□□ -0.23
USP11-204ENST00000377107 SPARCL1Q14515 664 aa13.6□□□□□ -0.23
USP11-204ENST00000377107 HADHQ16836 314 aaKnown RBP13.6□□□□□ -0.23
USP11-204ENST00000377107 TFDP3Q5H9I0 405 aa13.6□□□□□ -0.23
USP11-204ENST00000377107 ANKRD22Q5VYY1 191 aa13.6□□□□□ -0.23
USP11-204ENST00000377107 TRIM68Q6AZZ1 485 aa13.6□□□□□ -0.23
USP11-204ENST00000377107 SYDE1Q6ZW31 735 aaPredicted RBP13.6□□□□□ -0.23
USP11-204ENST00000377107 MAP3K20Q9NYL2 800 aaKnown RBP13.6□□□□□ -0.23
USP11-204ENST00000377107 PHTF1Q9UMS5 762 aa13.6□□□□□ -0.23
USP11-204ENST00000377107 SYNJ2BP-COX16A0A087WUM0 186 aa13.6□□□□□ -0.23
USP11-204ENST00000377107 DNALI1O14645 258 aaPredicted RBP13.6□□□□□ -0.23
USP11-204ENST00000377107 ADCY3O60266 1144 aa13.6□□□□□ -0.23
USP11-204ENST00000377107 KRT16P08779 473 aa13.6□□□□□ -0.23
USP11-204ENST00000377107 COPS2P61201 443 aa13.6□□□□□ -0.23
USP11-204ENST00000377107 PLCB4Q15147 1175 aa13.6□□□□□ -0.23
USP11-204ENST00000377107 TMEM63BQ5T3F8 832 aa13.6□□□□□ -0.23
USP11-204ENST00000377107 PLEKHA7Q6IQ23 1121 aa13.6□□□□□ -0.23
USP11-204ENST00000377107 MFSD5Q6N075 450 aa13.6□□□□□ -0.23
USP11-204ENST00000377107 RHBDF2Q6PJF5 856 aa13.6□□□□□ -0.23
USP11-204ENST00000377107 FBXO16Q8IX29 292 aaPredicted RBP13.6□□□□□ -0.23
USP11-204ENST00000377107 C7orf31Q8N865 590 aa13.6□□□□□ -0.23
USP11-204ENST00000377107 COX16Q9P0S2 106 aa13.6□□□□□ -0.23
USP11-204ENST00000377107 AKT3Q9Y243 479 aa13.6□□□□□ -0.23
USP11-204ENST00000377107 TMEM191CA6NGB0 347 aa13.6□□□□□ -0.23
USP11-204ENST00000377107 ITGB3P05106 788 aa13.6□□□□□ -0.23
USP11-204ENST00000377107 NQO1P15559 274 aaKnown RBP13.6□□□□□ -0.23
USP11-204ENST00000377107 MSH2P43246 934 aa13.6□□□□□ -0.23
USP11-204ENST00000377107 WDR4P57081 412 aaKnown RBP13.6□□□□□ -0.23
USP11-204ENST00000377107 C1QBPQ07021 282 aaKnown RBP13.6□□□□□ -0.23
USP11-204ENST00000377107 RFX8Q6ZV50 586 aa13.6□□□□□ -0.23
USP11-204ENST00000377107 SPATA33Q96N06 139 aa13.6□□□□□ -0.23
USP11-204ENST00000377107 PGAP2Q9UHJ9 254 aa13.6□□□□□ -0.23
USP11-204ENST00000377107 DIAPH2O60879 1101 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 TOM1L1O75674 476 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 CDH6P55285 790 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 EIF3EP60228 445 aaKnown RBP13.59□□□□□ -0.23
USP11-204ENST00000377107 NCALDP61601 193 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 FAM228AQ86W67 206 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 SEPT1Q8WYJ6 367 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 CPB2Q96IY4 423 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 PLCD4Q9BRC7 762 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 APOL6Q9BWW8 343 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 DHX33Q9H6R0 707 aaKnown RBP13.59□□□□□ -0.23
USP11-204ENST00000377107 RPF1Q9H9Y2 349 aaKnown RBP13.59□□□□□ -0.23
USP11-204ENST00000377107 AVILO75366 819 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 RBP3P10745 1247 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 ALDH3A1P30838 453 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 POLR2BP30876 1174 aaKnown RBP13.59□□□□□ -0.23
USP11-204ENST00000377107 MKRN3Q13064 507 aaKnown RBP13.59□□□□□ -0.23
USP11-204ENST00000377107 KLF1Q13351 362 aaPredicted RBP13.59□□□□□ -0.23
USP11-204ENST00000377107 NEDD9Q14511 834 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 SGSM1Q2NKQ1 1148 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 PTPN20Q4JDL3 420 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 SH3PXD2AQ5TCZ1 1133 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 CATSPERGQ6ZRH7 1159 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 MOB2Q70IA6 237 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 NETO2Q8NC67 525 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 FBXO36Q8NEA4 188 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 SPATA18Q8TC71 538 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 LRRC37BQ96QE4 947 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 MIS12Q9H081 205 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 IQCGQ9H095 443 aaKnown RBP13.59□□□□□ -0.23
USP11-204ENST00000377107 ELP3Q9H9T3 547 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 UBN1Q9NPG3 1134 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 XPO7Q9UIA9 1087 aaKnown RBP13.59□□□□□ -0.23
USP11-204ENST00000377107 MAD1L1Q9Y6D9 718 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 ATXN2Q99700 1313 aaKnown RBP13.59□□□□□ -0.23
USP11-204ENST00000377107 NFKBIEO00221 500 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 CBX6O95503 412 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 VCPP55072 806 aaKnown RBP13.59□□□□□ -0.23
USP11-204ENST00000377107 TMEM62Q0P6H9 643 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 KRT81Q14533 505 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 SLC1A5Q15758 541 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 EAPPQ56P03 285 aaPredicted RBP13.59□□□□□ -0.23
USP11-204ENST00000377107 XRRA1Q6P2D8 792 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 C15orf39Q6ZRI6 1047 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 ZCCHC9Q8N567 271 aaKnown RBP13.59□□□□□ -0.23
USP11-204ENST00000377107 AGAP11Q8TF27 550 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 MYCBPQ99417 103 aaPredicted RBP13.59□□□□□ -0.23
USP11-204ENST00000377107 ADPGKQ9BRR6 497 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 SMYD3Q9H7B4 428 aa13.59□□□□□ -0.23
USP11-204ENST00000377107 COL4A5P29400 1685 aa13.58□□□□□ -0.23
USP11-204ENST00000377107 PMM2O15305 246 aa13.58□□□□□ -0.24
USP11-204ENST00000377107 TAC1P20366 129 aa13.58□□□□□ -0.24
USP11-204ENST00000377107 ADRA1DP25100 572 aa13.58□□□□□ -0.24
USP11-204ENST00000377107 ZNF252P-AS1Q0IIN9 211 aa13.58□□□□□ -0.24
USP11-204ENST00000377107 XRCC4Q13426 336 aa13.58□□□□□ -0.24
USP11-204ENST00000377107 ATF7IP2Q5U623 682 aa13.58□□□□□ -0.24
USP11-204ENST00000377107 PHF13Q86YI8 300 aaPredicted RBP13.58□□□□□ -0.24
USP11-204ENST00000377107 UNC45BQ8IWX7 931 aa13.58□□□□□ -0.24
USP11-204ENST00000377107 PDIK1LQ8N165 341 aa13.58□□□□□ -0.24
USP11-204ENST00000377107 MTMR14Q8NCE2 650 aa13.58□□□□□ -0.24
USP11-204ENST00000377107 FAM49BQ9NUQ9 324 aa13.58□□□□□ -0.24
USP11-204ENST00000377107 HMGXB4Q9UGU5 601 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms