RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 SDK1Q7Z5N4 2213 aa18.79■□□□□ 0.6
HLA-A-201ENST00000376802 FRMD3A2A2Y4 597 aa18.78■□□□□ 0.6
HLA-A-201ENST00000376802 ITGB3P05106 788 aa18.78■□□□□ 0.6
HLA-A-201ENST00000376802 RETP07949 1114 aa18.78■□□□□ 0.6
HLA-A-201ENST00000376802 POLR2BP30876 1174 aaKnown RBP18.78■□□□□ 0.6
HLA-A-201ENST00000376802 HOXA6P31267 233 aa18.78■□□□□ 0.6
HLA-A-201ENST00000376802 PNPLA4P41247 253 aa18.78■□□□□ 0.6
HLA-A-201ENST00000376802 SPEM2Q0P670 501 aa18.78■□□□□ 0.6
HLA-A-201ENST00000376802 TAF12Q16514 161 aa18.78■□□□□ 0.6
HLA-A-201ENST00000376802 PRR23BQ6ZRT6 265 aa18.78■□□□□ 0.6
HLA-A-201ENST00000376802 MAB21L3Q8N8X9 362 aa18.78■□□□□ 0.6
HLA-A-201ENST00000376802 ZNF560Q96MR9 790 aa18.78■□□□□ 0.6
HLA-A-201ENST00000376802 GCNAQ96QF7 691 aa18.78■□□□□ 0.6
HLA-A-201ENST00000376802 PKMYT1Q99640 499 aa18.78■□□□□ 0.6
HLA-A-201ENST00000376802 PI4K2AQ9BTU6 479 aa18.78■□□□□ 0.6
HLA-A-201ENST00000376802 HPS4Q9NQG7 708 aa18.78■□□□□ 0.6
HLA-A-201ENST00000376802 THG1LQ9NWX6 298 aaKnown RBP18.78■□□□□ 0.6
HLA-A-201ENST00000376802 USP18Q9UMW8 372 aa18.78■□□□□ 0.6
HLA-A-201ENST00000376802 AGAP1Q9UPQ3 857 aa18.78■□□□□ 0.6
HLA-A-201ENST00000376802 EXOC7Q9UPT5 735 aa18.78■□□□□ 0.6
HLA-A-201ENST00000376802 EML5Q05BV3 1969 aa18.78■□□□□ 0.6
HLA-A-201ENST00000376802 GCNT3O95395 438 aa18.77■□□□□ 0.6
HLA-A-201ENST00000376802 PDCP20941 246 aa18.77■□□□□ 0.6
HLA-A-201ENST00000376802 SYT1P21579 422 aa18.77■□□□□ 0.6
HLA-A-201ENST00000376802 SDHBP21912 280 aa18.77■□□□□ 0.6
HLA-A-201ENST00000376802 GARTP22102 1010 aa18.77■□□□□ 0.6
HLA-A-201ENST00000376802 CEBPZQ03701 1054 aaKnown RBP18.77■□□□□ 0.6
HLA-A-201ENST00000376802 SIM2Q14190 667 aaPredicted RBP18.77■□□□□ 0.6
HLA-A-201ENST00000376802 SDHAF4Q5VUM1 108 aa18.77■□□□□ 0.6
HLA-A-201ENST00000376802 TXNDC8Q6A555 127 aa18.77■□□□□ 0.6
HLA-A-201ENST00000376802 HEATR6Q6AI08 1181 aaKnown RBP18.77■□□□□ 0.6
HLA-A-201ENST00000376802 PKN3Q6P5Z2 889 aa18.77■□□□□ 0.6
HLA-A-201ENST00000376802 LONP2Q86WA8 852 aa18.77■□□□□ 0.6
HLA-A-201ENST00000376802 SYNPOQ8N3V7 929 aa18.77■□□□□ 0.6
HLA-A-201ENST00000376802 LEO1Q8WVC0 666 aaPredicted RBP18.77■□□□□ 0.6
HLA-A-201ENST00000376802 ACBD6Q9BR61 282 aa18.77■□□□□ 0.6
HLA-A-201ENST00000376802 CBWD1Q9BRT8 395 aa18.77■□□□□ 0.6
HLA-A-201ENST00000376802 PANK2Q9BZ23 570 aa18.77■□□□□ 0.6
HLA-A-201ENST00000376802 RBAKQ9NYW8 714 aaPredicted RBP18.77■□□□□ 0.6
HLA-A-201ENST00000376802 SIX4Q9UIU6 781 aa18.77■□□□□ 0.6
HLA-A-201ENST00000376802 ZMYM5Q9UJ78 669 aa18.77■□□□□ 0.6
HLA-A-201ENST00000376802 RAB23Q9ULC3 237 aa18.77■□□□□ 0.6
HLA-A-201ENST00000376802 PCDHB13Q9Y5F0 798 aa18.77■□□□□ 0.6
HLA-A-201ENST00000376802 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.77■□□□□ 0.6
HLA-A-201ENST00000376802 GOLGA8IPA6NC78 632 aa18.76■□□□□ 0.59
HLA-A-201ENST00000376802 GOLGA8JA6NMD2 632 aa18.76■□□□□ 0.59
HLA-A-201ENST00000376802 PRPF40AO75400 957 aaKnown RBP18.76■□□□□ 0.59
HLA-A-201ENST00000376802 LDHAP00338 332 aaKnown RBP18.76■□□□□ 0.59
HLA-A-201ENST00000376802 CNR2P34972 360 aa18.76■□□□□ 0.59
HLA-A-201ENST00000376802 TSPY1Q01534 308 aa18.76■□□□□ 0.59
HLA-A-201ENST00000376802 DDR2Q16832 855 aa18.76■□□□□ 0.59
HLA-A-201ENST00000376802 CCDC142Q17RM4 750 aa18.76■□□□□ 0.59
HLA-A-201ENST00000376802 TMEM196Q5HYL7 178 aa18.76■□□□□ 0.59
HLA-A-201ENST00000376802 TRIM68Q6AZZ1 485 aa18.76■□□□□ 0.59
HLA-A-201ENST00000376802 CSGALNACT2Q8N6G5 542 aa18.76■□□□□ 0.59
HLA-A-201ENST00000376802 LRRC52Q8N7C0 313 aa18.76■□□□□ 0.59
HLA-A-201ENST00000376802 PDE11AQ9HCR9 933 aa18.76■□□□□ 0.59
HLA-A-201ENST00000376802 TDP1Q9NUW8 608 aa18.76■□□□□ 0.59
HLA-A-201ENST00000376802 GDAP2Q9NXN4 497 aa18.76■□□□□ 0.59
HLA-A-201ENST00000376802 DDX43Q9NXZ2 648 aaKnown RBP18.76■□□□□ 0.59
HLA-A-201ENST00000376802 GTF3C4Q9UKN8 822 aa18.76■□□□□ 0.59
HLA-A-201ENST00000376802 MORC2Q9Y6X9 1032 aaPredicted RBP18.76■□□□□ 0.59
HLA-A-201ENST00000376802 TPRP12270 2363 aaKnown RBP18.76■□□□□ 0.59
HLA-A-201ENST00000376802 SOBPA7XYQ1 873 aa18.75■□□□□ 0.59
HLA-A-201ENST00000376802 GABRDO14764 452 aa18.75■□□□□ 0.59
HLA-A-201ENST00000376802 EXTL3O43909 919 aa18.75■□□□□ 0.59
HLA-A-201ENST00000376802 TADA3O75528 432 aa18.75■□□□□ 0.59
HLA-A-201ENST00000376802 IDEP14735 1019 aa18.75■□□□□ 0.59
HLA-A-201ENST00000376802 ACAT1P24752 427 aaKnown RBP18.75■□□□□ 0.59
HLA-A-201ENST00000376802 CYP2F1P24903 491 aa18.75■□□□□ 0.59
HLA-A-201ENST00000376802 DDX6P26196 483 aaKnown RBP eCLIP18.75■□□□□ 0.59
HLA-A-201ENST00000376802 AVPR1AP37288 418 aa18.75■□□□□ 0.59
HLA-A-201ENST00000376802 RUNX3Q13761 415 aa18.75■□□□□ 0.59
HLA-A-201ENST00000376802 SLC39A14Q15043 492 aa18.75■□□□□ 0.59
HLA-A-201ENST00000376802 NFE2Q16621 373 aaPredicted RBP18.75■□□□□ 0.59
HLA-A-201ENST00000376802 INTS6LQ5JSJ4 861 aaKnown RBP18.75■□□□□ 0.59
HLA-A-201ENST00000376802 FSTL4Q6MZW2 842 aa18.75■□□□□ 0.59
HLA-A-201ENST00000376802 MON1AQ86VX9 555 aa18.75■□□□□ 0.59
HLA-A-201ENST00000376802 OSTM1Q86WC4 334 aa18.75■□□□□ 0.59
HLA-A-201ENST00000376802 TMEM86AQ8N2M4 240 aa18.75■□□□□ 0.59
HLA-A-201ENST00000376802 CACTINQ8WUQ7 758 aaKnown RBP18.75■□□□□ 0.59
HLA-A-201ENST00000376802 USP28Q96RU2 1077 aa18.75■□□□□ 0.59
HLA-A-201ENST00000376802 EBF3Q9H4W6 596 aa18.75■□□□□ 0.59
HLA-A-201ENST00000376802 PCIF1Q9H4Z3 704 aa18.75■□□□□ 0.59
HLA-A-201ENST00000376802 FBRSL1Q9HCM7 1045 aaKnown RBP18.75■□□□□ 0.59
HLA-A-201ENST00000376802 ABCB6Q9NP58 842 aa18.75■□□□□ 0.59
HLA-A-201ENST00000376802 PANK4Q9NVE7 773 aa18.75■□□□□ 0.59
HLA-A-201ENST00000376802 ITGA11Q9UKX5 1188 aa18.75■□□□□ 0.59
HLA-A-201ENST00000376802 CDV3Q9UKY7 258 aaKnown RBP18.75■□□□□ 0.59
HLA-A-201ENST00000376802 MAGED2Q9UNF1 606 aaPredicted RBP18.75■□□□□ 0.59
HLA-A-201ENST00000376802 PTPRDP23468 1912 aa18.75■□□□□ 0.59
HLA-A-201ENST00000376802 MYO16Q9Y6X6 1858 aa18.75■□□□□ 0.59
HLA-A-201ENST00000376802 DCDC2BA2VCK2 349 aa18.74■□□□□ 0.59
HLA-A-201ENST00000376802 TRDMT1O14717 391 aaKnown RBP18.74■□□□□ 0.59
HLA-A-201ENST00000376802 HCRTO43612 131 aa18.74■□□□□ 0.59
HLA-A-201ENST00000376802 HUS1O60921 280 aa18.74■□□□□ 0.59
HLA-A-201ENST00000376802 LRP3O75074 770 aa18.74■□□□□ 0.59
HLA-A-201ENST00000376802 PRPF6O94906 941 aaKnown RBP18.74■□□□□ 0.59
HLA-A-201ENST00000376802 CSH1P0DML2 217 aa18.74■□□□□ 0.59
HLA-A-201ENST00000376802 CSH2P0DML3 217 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms