RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 CITO14578 2027 aa21.35■■□□□ 1.01
VSX1-202ENST00000376709 MMP3P08254 477 aa21.34■■□□□ 1.01
VSX1-202ENST00000376709 PSMA2P25787 234 aa21.34■■□□□ 1.01
VSX1-202ENST00000376709 RFC1P35251 1148 aaPredicted RBP21.34■■□□□ 1.01
VSX1-202ENST00000376709 LMNB2Q03252 620 aa21.34■■□□□ 1.01
VSX1-202ENST00000376709 C6orf118Q5T5N4 469 aa21.34■■□□□ 1.01
VSX1-202ENST00000376709 ILDR2Q71H61 639 aa21.34■■□□□ 1.01
VSX1-202ENST00000376709 CXorf38Q8TB03 319 aa21.34■■□□□ 1.01
VSX1-202ENST00000376709 ACSF2Q96CM8 615 aaPredicted RBP21.34■■□□□ 1.01
VSX1-202ENST00000376709 TMEM176AQ96HP8 235 aa21.34■■□□□ 1.01
VSX1-202ENST00000376709 PPANQ9NQ55 473 aaKnown RBP21.34■■□□□ 1.01
VSX1-202ENST00000376709 AAASQ9NRG9 546 aa21.34■■□□□ 1.01
VSX1-202ENST00000376709 DDX56Q9NY93 547 aaKnown RBP21.34■■□□□ 1.01
VSX1-202ENST00000376709 TJP2Q9UDY2 1190 aa21.34■■□□□ 1.01
VSX1-202ENST00000376709 AGAP1Q9UPQ3 857 aa21.34■■□□□ 1.01
VSX1-202ENST00000376709 LRRD1A4D1F6 860 aa21.34■■□□□ 1.01
VSX1-202ENST00000376709 E7EVH7 732 aa21.34■■□□□ 1.01
VSX1-202ENST00000376709 ADCY6O43306 1168 aa21.34■■□□□ 1.01
VSX1-202ENST00000376709 CILPO75339 1184 aa21.34■■□□□ 1.01
VSX1-202ENST00000376709 CHKAP35790 457 aa21.34■■□□□ 1.01
VSX1-202ENST00000376709 SEC24CP53992 1094 aa21.34■■□□□ 1.01
VSX1-202ENST00000376709 HUNKP57058 714 aa21.34■■□□□ 1.01
VSX1-202ENST00000376709 COPS2P61201 443 aa21.34■■□□□ 1.01
VSX1-202ENST00000376709 DGKDQ16760 1214 aa21.34■■□□□ 1.01
VSX1-202ENST00000376709 TXNRD3NBQ6F5E7 133 aa21.34■■□□□ 1.01
VSX1-202ENST00000376709 SPOCD1Q6ZMY3 1216 aa21.34■■□□□ 1.01
VSX1-202ENST00000376709 EPS8L3Q8TE67 593 aaKnown RBP21.34■■□□□ 1.01
VSX1-202ENST00000376709 CPXM1Q96SM3 734 aa21.34■■□□□ 1.01
VSX1-202ENST00000376709 ABHD16BQ9H3Z7 469 aa21.34■■□□□ 1.01
VSX1-202ENST00000376709 VRTNQ9H8Y1 702 aa21.34■■□□□ 1.01
VSX1-202ENST00000376709 CYP3A43Q9HB55 503 aa21.34■■□□□ 1.01
VSX1-202ENST00000376709 NEU2Q9Y3R4 380 aa21.34■■□□□ 1.01
VSX1-202ENST00000376709 SIGLEC16A6NMB1 481 aa21.33■■□□□ 1.01
VSX1-202ENST00000376709 ACSL3O95573 720 aa21.33■■□□□ 1.01
VSX1-202ENST00000376709 SLCO1A2P46721 670 aa21.33■■□□□ 1.01
VSX1-202ENST00000376709 TFDP3Q5H9I0 405 aa21.33■■□□□ 1.01
VSX1-202ENST00000376709 MARCH8Q5T0T0 291 aa21.33■■□□□ 1.01
VSX1-202ENST00000376709 C10orf67Q8IYJ2 551 aa21.33■■□□□ 1.01
VSX1-202ENST00000376709 KIAA0319LQ8IZA0 1049 aa21.33■■□□□ 1.01
VSX1-202ENST00000376709 BBOF1Q8ND07 529 aa21.33■■□□□ 1.01
VSX1-202ENST00000376709 RAPGEF5Q92565 580 aa21.33■■□□□ 1.01
VSX1-202ENST00000376709 DDX23Q9BUQ8 820 aaKnown RBP21.33■■□□□ 1.01
VSX1-202ENST00000376709 ELOVL4Q9GZR5 314 aa21.33■■□□□ 1.01
VSX1-202ENST00000376709 CNOT10Q9H9A5 744 aaKnown RBP21.33■■□□□ 1.01
VSX1-202ENST00000376709 ITGA11Q9UKX5 1188 aa21.33■■□□□ 1.01
VSX1-202ENST00000376709 GINS2Q9Y248 185 aa21.33■■□□□ 1.01
VSX1-202ENST00000376709 A0A1B0GUA9 196 aa21.33■■□□□ 1
VSX1-202ENST00000376709 M0QYV0 167 aa21.33■■□□□ 1
VSX1-202ENST00000376709 RASGRF2O14827 1237 aa21.33■■□□□ 1
VSX1-202ENST00000376709 LIASO43766 372 aa21.33■■□□□ 1
VSX1-202ENST00000376709 DPH6Q7L8W6 267 aa21.33■■□□□ 1
VSX1-202ENST00000376709 DNAJC17Q9NVM6 304 aaKnown RBP21.33■■□□□ 1
VSX1-202ENST00000376709 DPP3Q9NY33 737 aa21.33■■□□□ 1
VSX1-202ENST00000376709 ZNF148Q9UQR1 794 aa21.33■■□□□ 1
VSX1-202ENST00000376709 C2CD2Q9Y426 696 aa21.33■■□□□ 1
VSX1-202ENST00000376709 SLC15A5A6NIM6 579 aa21.32■■□□□ 1
VSX1-202ENST00000376709 ZNF410Q86VK4 478 aa21.32■■□□□ 1
VSX1-202ENST00000376709 NLRP14Q86W24 1093 aa21.32■■□□□ 1
VSX1-202ENST00000376709 JOSD2Q8TAC2 188 aa21.32■■□□□ 1
VSX1-202ENST00000376709 HEXIM2Q96MH2 286 aaKnown RBP21.32■■□□□ 1
VSX1-202ENST00000376709 TMEM109Q9BVC6 243 aa21.32■■□□□ 1
VSX1-202ENST00000376709 STMN4Q9H169 189 aaPredicted RBP21.32■■□□□ 1
VSX1-202ENST00000376709 WDR35Q9P2L0 1181 aa21.32■■□□□ 1
VSX1-202ENST00000376709 DNPEPQ9ULA0 475 aa21.32■■□□□ 1
VSX1-202ENST00000376709 SRRM3A6NNA2 597 aaPredicted RBP21.31■■□□□ 1
VSX1-202ENST00000376709 MICAL2O94851 1124 aa21.31■■□□□ 1
VSX1-202ENST00000376709 RBP5P82980 135 aa21.31■■□□□ 1
VSX1-202ENST00000376709 KIZQ2M2Z5 673 aa21.31■■□□□ 1
VSX1-202ENST00000376709 IZUMO3Q5VZ72 239 aa21.31■■□□□ 1
VSX1-202ENST00000376709 POLNQ7Z5Q5 900 aa21.31■■□□□ 1
VSX1-202ENST00000376709 KIF12Q96FN5 646 aa21.31■■□□□ 1
VSX1-202ENST00000376709 FAM107BQ9H098 131 aa21.31■■□□□ 1
VSX1-202ENST00000376709 ZWILCHQ9H900 591 aa21.31■■□□□ 1
VSX1-202ENST00000376709 NMRK2Q9NPI5 230 aa21.31■■□□□ 1
VSX1-202ENST00000376709 METTL5Q9NRN9 209 aaKnown RBP21.31■■□□□ 1
VSX1-202ENST00000376709 SETD4Q9NVD3 440 aa21.31■■□□□ 1
VSX1-202ENST00000376709 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.31■■□□□ 1
VSX1-202ENST00000376709 hCG_1818297A0A087WSY0 165 aa21.31■■□□□ 1
VSX1-202ENST00000376709 IGF2BP3O00425 579 aaKnown RBP eCLIP21.31■■□□□ 1
VSX1-202ENST00000376709 AGTP01019 485 aa21.31■■□□□ 1
VSX1-202ENST00000376709 ERBB2P04626 1255 aa21.31■■□□□ 1
VSX1-202ENST00000376709 IRX5P78411 483 aaPredicted RBP21.31■■□□□ 1
VSX1-202ENST00000376709 PRAMEF19Q5SWL8 479 aa21.31■■□□□ 1
VSX1-202ENST00000376709 XYLT1Q86Y38 959 aa21.31■■□□□ 1
VSX1-202ENST00000376709 MYCBPAPQ8TBZ2 947 aa21.31■■□□□ 1
VSX1-202ENST00000376709 CCT8L2Q96SF2 557 aa21.31■■□□□ 1
VSX1-202ENST00000376709 KLRC2P26717 231 aa21.3■■□□□ 1
VSX1-202ENST00000376709 PTPN7P35236 360 aa21.3■■□□□ 1
VSX1-202ENST00000376709 CDKN2BP42772 138 aa21.3■■□□□ 1
VSX1-202ENST00000376709 TMEM62Q0P6H9 643 aa21.3■■□□□ 1
VSX1-202ENST00000376709 HADHQ16836 314 aaKnown RBP21.3■■□□□ 1
VSX1-202ENST00000376709 SMTNL2Q2TAL5 461 aa21.3■■□□□ 1
VSX1-202ENST00000376709 P3H1Q32P28 736 aa21.3■■□□□ 1
VSX1-202ENST00000376709 PRUNE1Q86TP1 453 aa21.3■■□□□ 1
VSX1-202ENST00000376709 EMC1Q8N766 993 aa21.3■■□□□ 1
VSX1-202ENST00000376709 CCHCR1Q8TD31 782 aa21.3■■□□□ 1
VSX1-202ENST00000376709 FNIP1Q8TF40 1166 aa21.3■■□□□ 1
VSX1-202ENST00000376709 ZNF473Q8WTR7 871 aaKnown RBP21.3■■□□□ 1
VSX1-202ENST00000376709 HAUS1Q96CS2 278 aa21.3■■□□□ 1
VSX1-202ENST00000376709 FAM49AQ9H0Q0 323 aaPredicted RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms