RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 TBC1D10AQ9BXI6 508 aa15.09■□□□□ 0.01
TNFRSF1B-201ENST00000376259 MANSC1Q9H8J5 431 aa15.09■□□□□ 0.01
TNFRSF1B-201ENST00000376259 SLC17A7Q9P2U7 560 aa15.09■□□□□ 0.01
TNFRSF1B-201ENST00000376259 PACSIN3Q9UKS6 424 aa15.09■□□□□ 0.01
TNFRSF1B-201ENST00000376259 GLI3P10071 1580 aa15.09■□□□□ 0.01
TNFRSF1B-201ENST00000376259 PIK3CDO00329 1044 aa15.09■□□□□ 0.01
TNFRSF1B-201ENST00000376259 CAPN9O14815 690 aa15.09■□□□□ 0.01
TNFRSF1B-201ENST00000376259 STAT5BP51692 787 aa15.09■□□□□ 0.01
TNFRSF1B-201ENST00000376259 WDR4P57081 412 aaKnown RBP15.09■□□□□ 0.01
TNFRSF1B-201ENST00000376259 STXBP2Q15833 593 aa15.09■□□□□ 0.01
TNFRSF1B-201ENST00000376259 XKR3Q5GH77 459 aa15.09■□□□□ 0.01
TNFRSF1B-201ENST00000376259 LGSNQ5TDP6 509 aa15.09■□□□□ 0.01
TNFRSF1B-201ENST00000376259 C1orf146Q5VVC0 180 aa15.09■□□□□ 0.01
TNFRSF1B-201ENST00000376259 ENOSF1Q7L5Y1 443 aa15.09■□□□□ 0.01
TNFRSF1B-201ENST00000376259 ZNF354CQ86Y25 554 aa15.09■□□□□ 0.01
TNFRSF1B-201ENST00000376259 NUDCD3Q8IVD9 361 aa15.09■□□□□ 0.01
TNFRSF1B-201ENST00000376259 MAP4K3Q8IVH8 894 aa15.09■□□□□ 0.01
TNFRSF1B-201ENST00000376259 ZNF526Q8TF50 670 aaPredicted RBP15.09■□□□□ 0.01
TNFRSF1B-201ENST00000376259 FAM49AQ9H0Q0 323 aaPredicted RBP15.09■□□□□ 0.01
TNFRSF1B-201ENST00000376259 IFT122Q9HBG6 1241 aa15.09■□□□□ 0.01
TNFRSF1B-201ENST00000376259 ITGB4P16144 1822 aa15.09■□□□□ 0.01
TNFRSF1B-201ENST00000376259 ADGRA3Q8IWK6 1321 aa15.09■□□□□ 0.01
TNFRSF1B-201ENST00000376259 IQANK1A0A1B0GTG1 560 aa15.08■□□□□ 0.01
TNFRSF1B-201ENST00000376259 WNT10BO00744 389 aa15.08■□□□□ 0.01
TNFRSF1B-201ENST00000376259 MYL2P10916 166 aa15.08■□□□□ 0.01
TNFRSF1B-201ENST00000376259 BCAR1P56945 870 aa15.08■□□□□ 0.01
TNFRSF1B-201ENST00000376259 SLFN12LQ6IEE8 588 aa15.08■□□□□ 0.01
TNFRSF1B-201ENST00000376259 MECRQ9BV79 373 aa15.08■□□□□ 0.01
TNFRSF1B-201ENST00000376259 VPS11Q9H270 941 aa15.08■□□□□ 0.01
TNFRSF1B-201ENST00000376259 DHX35Q9H5Z1 703 aaKnown RBP15.08■□□□□ 0.01
TNFRSF1B-201ENST00000376259 YY1AP1Q9H869 796 aa15.08■□□□□ 0.01
TNFRSF1B-201ENST00000376259 FAM155BO75949 473 aa15.08■□□□□ 0
TNFRSF1B-201ENST00000376259 ELK3P41970 407 aa15.08■□□□□ 0
TNFRSF1B-201ENST00000376259 PTK6Q13882 451 aa15.08■□□□□ 0
TNFRSF1B-201ENST00000376259 EFCAB3Q8N7B9 438 aa15.08■□□□□ 0
TNFRSF1B-201ENST00000376259 ZNF75CPQ92670 426 aaPredicted RBP15.08■□□□□ 0
TNFRSF1B-201ENST00000376259 CENPTQ96BT3 561 aa15.08■□□□□ 0
TNFRSF1B-201ENST00000376259 TTC25Q96NG3 672 aa15.08■□□□□ 0
TNFRSF1B-201ENST00000376259 DEFB129Q9H1M3 183 aa15.08■□□□□ 0
TNFRSF1B-201ENST00000376259 RPF1Q9H9Y2 349 aaKnown RBP15.08■□□□□ 0
TNFRSF1B-201ENST00000376259 MCM8Q9UJA3 840 aa15.08■□□□□ 0
TNFRSF1B-201ENST00000376259 WDR46O15213 610 aaKnown RBP15.08■□□□□ 0
TNFRSF1B-201ENST00000376259 GPC3P51654 580 aa15.08■□□□□ 0
TNFRSF1B-201ENST00000376259 CLCN3P51790 818 aa15.08■□□□□ 0
TNFRSF1B-201ENST00000376259 GEMIN4P57678 1058 aaKnown RBP15.08■□□□□ 0
TNFRSF1B-201ENST00000376259 PIGWQ7Z7B1 504 aa15.08■□□□□ 0
TNFRSF1B-201ENST00000376259 SLC9A9Q8IVB4 645 aa15.08■□□□□ 0
TNFRSF1B-201ENST00000376259 ASAP3Q8TDY4 903 aa15.08■□□□□ 0
TNFRSF1B-201ENST00000376259 DEPDC1BQ8WUY9 529 aa15.08■□□□□ 0
TNFRSF1B-201ENST00000376259 NAF1Q96HR8 494 aaKnown RBP15.08■□□□□ 0
TNFRSF1B-201ENST00000376259 VCXQ9H320 206 aa15.08■□□□□ 0
TNFRSF1B-201ENST00000376259 H0YCG3 227 aa15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 DNALI1O14645 258 aaPredicted RBP15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 CD48P09326 243 aa15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 ROR1Q01973 937 aa15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 TFDP3Q5H9I0 405 aa15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 C1orf220Q5T0J3 134 aa15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 ANKRD22Q5VYY1 191 aa15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 DDX50Q9BQ39 737 aaKnown RBP15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 ANKEF1Q9NU02 776 aa15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 ECM29Q5VYK3 1845 aa15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 USP54Q70EL1 1684 aa15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 PGK2P07205 417 aa15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 GSTA1P08263 222 aa15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 TBXAS1P24557 533 aaPredicted RBP15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 CENPCQ03188 943 aa15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 CXCL9Q07325 125 aa15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 MTFR1Q15390 333 aa15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 TAF5Q15542 800 aa15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 SLC15A2Q16348 729 aa15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 PCGF5Q86SE9 256 aa15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 POU5F2Q8N7G0 328 aa15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 ZNF516Q92618 1163 aa15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 TSC22D3Q99576 134 aa15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 AAASQ9NRG9 546 aa15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 ZC3H7BQ9UGR2 993 aaKnown RBP15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 NR2E3Q9Y5X4 410 aa15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 DOT1LQ8TEK3 1739 aa15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 SLC26A4O43511 780 aa15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 PRKCBP05771 671 aa15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 ABCG1P45844 678 aa15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 FAAP100Q0VG06 881 aa15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 PAF1Q8N7H5 531 aa15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 OR6B3Q8NGW1 331 aa15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 PSPC1Q8WXF1 523 aaKnown RBP15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 DNAJC9Q8WXX5 260 aa15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 SPATS2LQ9NUQ6 558 aaKnown RBP15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 PLIN4Q96Q06 1357 aa15.07■□□□□ 0
TNFRSF1B-201ENST00000376259 MEI4A8MW99 385 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 PDGFRBP09619 1106 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 CRADDP78560 199 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 SGSM1Q2NKQ1 1148 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 GRAMD1BQ3KR37 738 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 DLK2Q6UY11 383 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 NDUFAF2Q8N183 169 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 EXD1Q8NHP7 514 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 JOSD2Q8TAC2 188 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 SLC26A7Q8TE54 656 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 GRAMD1AQ96CP6 724 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 DDX27Q96GQ7 796 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms