RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 ACAD10Q6JQN1 1059 aa11.11□□□□□ -0.63
PDPN-203ENST00000376061 OTOP2Q7RTS6 562 aa11.11□□□□□ -0.63
PDPN-203ENST00000376061 C12orf29Q8N999 325 aa11.11□□□□□ -0.63
PDPN-203ENST00000376061 C1orf131Q8NDD1 294 aaKnown RBP11.11□□□□□ -0.63
PDPN-203ENST00000376061 SPATA18Q8TC71 538 aa11.11□□□□□ -0.63
PDPN-203ENST00000376061 CYFIP2Q96F07 1278 aa11.11□□□□□ -0.63
PDPN-203ENST00000376061 TMEM175Q9BSA9 504 aa11.11□□□□□ -0.63
PDPN-203ENST00000376061 IRX2Q9BZI1 471 aaPredicted RBP11.11□□□□□ -0.63
PDPN-203ENST00000376061 DDX43Q9NXZ2 648 aaKnown RBP11.11□□□□□ -0.63
PDPN-203ENST00000376061 SALL4Q9UJQ4 1053 aa11.11□□□□□ -0.63
PDPN-203ENST00000376061 KIAA1257Q9ULG3 409 aa11.11□□□□□ -0.63
PDPN-203ENST00000376061 GUCA1BQ9UMX6 200 aa11.11□□□□□ -0.63
PDPN-203ENST00000376061 TIMM13Q9Y5L4 95 aaPredicted RBP11.11□□□□□ -0.63
PDPN-203ENST00000376061 ARHGEF37A1IGU5 675 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 MACROD2A1Z1Q3 448 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 ANKRD62A6NC57 917 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 BTNL10A8MVZ5 291 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 M0QYV0 167 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 NRP1O14786 923 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 TYMPP19971 482 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 ABCB4P21439 1286 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 ACAT1P24752 427 aaKnown RBP11.1□□□□□ -0.63
PDPN-203ENST00000376061 PBX3P40426 434 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 LHX1P48742 406 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 BCAR1P56945 870 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 PSMC1P62191 440 aaKnown RBP11.1□□□□□ -0.63
PDPN-203ENST00000376061 CNGA2Q16280 664 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 GOLGA7BQ2TAP0 167 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 TMEM240Q5SV17 173 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 COL13A1Q5TAT6 717 aaPredicted RBP11.1□□□□□ -0.63
PDPN-203ENST00000376061 KIAA0319Q5VV43 1072 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 ARHGAP17Q68EM7 881 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 FAM117BQ6P1L5 589 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 PSRC1Q6PGN9 363 aaPredicted RBP11.1□□□□□ -0.63
PDPN-203ENST00000376061 LCLAT1Q6UWP7 414 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 ZNF365Q70YC5 407 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 MON1BQ7L1V2 547 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 TMEM173Q86WV6 379 aaPredicted RBP11.1□□□□□ -0.63
PDPN-203ENST00000376061 METTL23Q86XA0 190 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 PHF13Q86YI8 300 aaPredicted RBP11.1□□□□□ -0.63
PDPN-203ENST00000376061 CRYBG2Q8N1P7 616 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 B3GALNT2Q8NCR0 500 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 CPA5Q8WXQ8 436 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 CTNNBL1Q8WYA6 563 aaPredicted RBP11.1□□□□□ -0.63
PDPN-203ENST00000376061 ZNF689Q96CS4 500 aaPredicted RBP11.1□□□□□ -0.63
PDPN-203ENST00000376061 ARHGEF26Q96DR7 871 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 TNIP3Q96KP6 325 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 LPIN3Q9BQK8 851 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 RTP3Q9BQQ7 232 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 SYT15Q9BQS2 421 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 THAP2Q9H0W7 228 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 LHX5Q9H2C1 402 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 CWH43Q9H720 699 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 FAM49BQ9NUQ9 324 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 ADAM28Q9UKQ2 775 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 TSPAN16Q9UKR8 245 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 DSEQ9UL01 958 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 ZMYND8Q9ULU4 1186 aaPredicted RBP11.1□□□□□ -0.63
PDPN-203ENST00000376061 CEP83Q9Y592 693 aa11.1□□□□□ -0.63
PDPN-203ENST00000376061 A0A0A6YYK5 440 aaPredicted RBP11.09□□□□□ -0.63
PDPN-203ENST00000376061 ZBBXA8MT70 800 aa11.09□□□□□ -0.63
PDPN-203ENST00000376061 KIF5CO60282 957 aa11.09□□□□□ -0.63
PDPN-203ENST00000376061 ATP2C2O75185 946 aa11.09□□□□□ -0.63
PDPN-203ENST00000376061 FGBP02675 491 aa11.09□□□□□ -0.63
PDPN-203ENST00000376061 GALTP07902 379 aa11.09□□□□□ -0.63
PDPN-203ENST00000376061 CCDC130P13994 396 aa11.09□□□□□ -0.63
PDPN-203ENST00000376061 TKTP29401 623 aaKnown RBP11.09□□□□□ -0.63
PDPN-203ENST00000376061 NSFP46459 744 aaKnown RBP11.09□□□□□ -0.63
PDPN-203ENST00000376061 GNG11P61952 73 aa11.09□□□□□ -0.63
PDPN-203ENST00000376061 ETF1P62495 437 aaKnown RBP11.09□□□□□ -0.63
PDPN-203ENST00000376061 STILQ15468 1287 aa11.09□□□□□ -0.63
PDPN-203ENST00000376061 PPP1R26Q5T8A7 1209 aaPredicted RBP11.09□□□□□ -0.63
PDPN-203ENST00000376061 OVOS1Q6IE37 1185 aa11.09□□□□□ -0.63
PDPN-203ENST00000376061 PPP1R2P3Q6NXS1 205 aa11.09□□□□□ -0.63
PDPN-203ENST00000376061 CMTR2Q8IYT2 770 aaKnown RBP11.09□□□□□ -0.63
PDPN-203ENST00000376061 WDTC1Q8N5D0 677 aa11.09□□□□□ -0.63
PDPN-203ENST00000376061 TMEM35BQ8NCS4 154 aa11.09□□□□□ -0.63
PDPN-203ENST00000376061 BCL7CQ8WUZ0 217 aaPredicted RBP11.09□□□□□ -0.63
PDPN-203ENST00000376061 RFFLQ8WZ73 363 aa11.09□□□□□ -0.63
PDPN-203ENST00000376061 SECISBP2LQ93073 1101 aaKnown RBP11.09□□□□□ -0.63
PDPN-203ENST00000376061 ZNF653Q96CK0 615 aa11.09□□□□□ -0.63
PDPN-203ENST00000376061 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.09□□□□□ -0.63
PDPN-203ENST00000376061 COLEC11Q9BWP8 271 aa11.09□□□□□ -0.63
PDPN-203ENST00000376061 KRTAP3-3Q9BYR6 98 aa11.09□□□□□ -0.63
PDPN-203ENST00000376061 KRTAP3-2Q9BYR7 98 aa11.09□□□□□ -0.63
PDPN-203ENST00000376061 DNAI2Q9GZS0 605 aa11.09□□□□□ -0.63
PDPN-203ENST00000376061 CRTAC1Q9NQ79 661 aa11.09□□□□□ -0.63
PDPN-203ENST00000376061 CXXC1Q9P0U4 656 aaPredicted RBP11.09□□□□□ -0.63
PDPN-203ENST00000376061 CYTH4Q9UIA0 394 aa11.09□□□□□ -0.63
PDPN-203ENST00000376061 FAN1Q9Y2M0 1017 aa11.09□□□□□ -0.63
PDPN-203ENST00000376061 PAXBP1Q9Y5B6 917 aa11.09□□□□□ -0.63
PDPN-203ENST00000376061 CAPN6Q9Y6Q1 641 aa11.09□□□□□ -0.63
PDPN-203ENST00000376061 GBF1Q92538 1859 aa11.09□□□□□ -0.63
PDPN-203ENST00000376061 SF3B1O75533 1304 aaKnown RBP eCLIP11.08□□□□□ -0.64
PDPN-203ENST00000376061 KIF2AO00139 706 aaPredicted RBP11.08□□□□□ -0.64
PDPN-203ENST00000376061 FANCGO15287 622 aa11.08□□□□□ -0.64
PDPN-203ENST00000376061 TRAPPC3O43617 180 aa11.08□□□□□ -0.64
PDPN-203ENST00000376061 TADA2AO75478 443 aa11.08□□□□□ -0.64
PDPN-203ENST00000376061 MOCS3O95396 460 aa11.08□□□□□ -0.64
PDPN-203ENST00000376061 ALDH2P05091 517 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms