RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 GRID1Q9ULK0 1009 aa15.32■□□□□ 0.04
MSH5-201ENST00000375703 FER1L6Q2WGJ9 1857 aa15.32■□□□□ 0.04
MSH5-201ENST00000375703 BANF1O75531 89 aa15.31■□□□□ 0.04
MSH5-201ENST00000375703 RFC5P40937 340 aa15.31■□□□□ 0.04
MSH5-201ENST00000375703 LACTBP83111 547 aaPredicted RBP15.31■□□□□ 0.04
MSH5-201ENST00000375703 FSTL1Q12841 308 aa15.31■□□□□ 0.04
MSH5-201ENST00000375703 TRPC3Q13507 836 aa15.31■□□□□ 0.04
MSH5-201ENST00000375703 RGS9BPQ6ZS82 235 aa15.31■□□□□ 0.04
MSH5-201ENST00000375703 SLC35B2Q8TB61 432 aa15.31■□□□□ 0.04
MSH5-201ENST00000375703 LRRC37BQ96QE4 947 aa15.31■□□□□ 0.04
MSH5-201ENST00000375703 WRNIP1Q96S55 665 aa15.31■□□□□ 0.04
MSH5-201ENST00000375703 NIF3L1Q9GZT8 377 aa15.31■□□□□ 0.04
MSH5-201ENST00000375703 PPCSQ9HAB8 311 aa15.31■□□□□ 0.04
MSH5-201ENST00000375703 PSMC3IPQ9P2W1 217 aaPredicted RBP15.31■□□□□ 0.04
MSH5-201ENST00000375703 CEP83Q9Y592 693 aa15.31■□□□□ 0.04
MSH5-201ENST00000375703 ATP5HO75947 161 aa15.31■□□□□ 0.04
MSH5-201ENST00000375703 ALDH3A1P30838 453 aa15.31■□□□□ 0.04
MSH5-201ENST00000375703 ICAM3P32942 547 aa15.31■□□□□ 0.04
MSH5-201ENST00000375703 YARSP54577 528 aaKnown RBP15.31■□□□□ 0.04
MSH5-201ENST00000375703 GEMIN4P57678 1058 aaKnown RBP15.31■□□□□ 0.04
MSH5-201ENST00000375703 DYNLT1P63172 113 aa15.31■□□□□ 0.04
MSH5-201ENST00000375703 ATP11AP98196 1134 aa15.31■□□□□ 0.04
MSH5-201ENST00000375703 HIF1AQ16665 826 aa15.31■□□□□ 0.04
MSH5-201ENST00000375703 DUOXA2Q1HG44 320 aa15.31■□□□□ 0.04
MSH5-201ENST00000375703 ZPBP2Q6X784 338 aa15.31■□□□□ 0.04
MSH5-201ENST00000375703 CATSPERGQ6ZRH7 1159 aa15.31■□□□□ 0.04
MSH5-201ENST00000375703 NIPA2Q8N8Q9 360 aa15.31■□□□□ 0.04
MSH5-201ENST00000375703 PYROXD1Q8WU10 500 aa15.31■□□□□ 0.04
MSH5-201ENST00000375703 NSMCE1Q8WV22 266 aa15.31■□□□□ 0.04
MSH5-201ENST00000375703 TFAP2BQ92481 460 aa15.31■□□□□ 0.04
MSH5-201ENST00000375703 RAB3IPQ96QF0 476 aaPredicted RBP15.31■□□□□ 0.04
MSH5-201ENST00000375703 ZWILCHQ9H900 591 aa15.31■□□□□ 0.04
MSH5-201ENST00000375703 NOP53Q9NZM5 478 aaKnown RBP15.31■□□□□ 0.04
MSH5-201ENST00000375703 FZD1Q9UP38 647 aa15.31■□□□□ 0.04
MSH5-201ENST00000375703 EDF1O60869 148 aaKnown RBP15.3■□□□□ 0.04
MSH5-201ENST00000375703 PSEN1P49768 467 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 GPX6P59796 221 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 MOGSQ13724 837 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 RASA2Q15283 850 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 PRPF31Q8WWY3 499 aaKnown RBP15.3■□□□□ 0.04
MSH5-201ENST00000375703 ERP27Q96DN0 273 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 RSRC1Q96IZ7 334 aaKnown RBP15.3■□□□□ 0.04
MSH5-201ENST00000375703 MAK16Q9BXY0 300 aaKnown RBP15.3■□□□□ 0.04
MSH5-201ENST00000375703 C10orf88Q9H8K7 445 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 RABGEF1Q9UJ41 708 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 CHKBQ9Y259 395 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 C15orf41Q9Y2V0 281 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 C19orf81C9J6K1 198 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 TYROBPO43914 113 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 TOM1L1O75674 476 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 KRT4P19013 534 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 PSMA2P25787 234 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 RFC1P35251 1148 aaPredicted RBP15.3■□□□□ 0.04
MSH5-201ENST00000375703 CTCFP49711 727 aaPredicted RBP15.3■□□□□ 0.04
MSH5-201ENST00000375703 OTUD4Q01804 1114 aaKnown RBP15.3■□□□□ 0.04
MSH5-201ENST00000375703 GRM1Q13255 1194 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 ACTL9Q8TC94 416 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 C12orf42Q96LP6 360 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 HOXC10Q9NYD6 342 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 PCDHGC3Q9UN70 934 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 IGKV6D-21A0A0A0MT36 114 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 C3orf70A6NLC5 250 aaPredicted RBP15.3■□□□□ 0.04
MSH5-201ENST00000375703 CST8O60676 142 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 SSTR1P30872 391 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 CDH5P33151 784 aaPredicted RBP15.3■□□□□ 0.04
MSH5-201ENST00000375703 PHBP35232 272 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 PSMC4P43686 418 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 TFAMQ00059 246 aaKnown RBP15.3■□□□□ 0.04
MSH5-201ENST00000375703 CNTN2Q02246 1040 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 EN1Q05925 392 aaPredicted RBP15.3■□□□□ 0.04
MSH5-201ENST00000375703 TARBP2Q15633 366 aaKnown RBP15.3■□□□□ 0.04
MSH5-201ENST00000375703 SMTNL2Q2TAL5 461 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 EFHC2Q5JST6 749 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 KCNT1Q5JUK3 1230 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 PRAMEF18Q5VWM3 479 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 LVRNQ6Q4G3 990 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 SCARA5Q6ZMJ2 495 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 C3orf62Q6ZUJ4 267 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 POLNQ7Z5Q5 900 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 PPIL6Q8IXY8 311 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 PCYT2Q99447 389 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 MRPL4Q9BYD3 311 aaKnown RBP15.3■□□□□ 0.04
MSH5-201ENST00000375703 ZNF112Q9UJU3 913 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 FARP1Q9Y4F1 1045 aaPredicted RBP15.3■□□□□ 0.04
MSH5-201ENST00000375703 SNCAIPQ9Y6H5 919 aa15.3■□□□□ 0.04
MSH5-201ENST00000375703 FAM189A1O60320 539 aa15.29■□□□□ 0.04
MSH5-201ENST00000375703 DCTN3O75935 186 aa15.29■□□□□ 0.04
MSH5-201ENST00000375703 SRGAP2CP0DJJ0 459 aa15.29■□□□□ 0.04
MSH5-201ENST00000375703 KRT3P12035 628 aa15.29■□□□□ 0.04
MSH5-201ENST00000375703 POLR2BP30876 1174 aaKnown RBP15.29■□□□□ 0.04
MSH5-201ENST00000375703 STAT5BP51692 787 aa15.29■□□□□ 0.04
MSH5-201ENST00000375703 EFNA5P52803 228 aa15.29■□□□□ 0.04
MSH5-201ENST00000375703 ARL4CP56559 192 aa15.29■□□□□ 0.04
MSH5-201ENST00000375703 GAD2Q05329 585 aa15.29■□□□□ 0.04
MSH5-201ENST00000375703 TFDP1Q14186 410 aa15.29■□□□□ 0.04
MSH5-201ENST00000375703 FNBP1LQ5T0N5 605 aa15.29■□□□□ 0.04
MSH5-201ENST00000375703 DNERQ8NFT8 737 aa15.29■□□□□ 0.04
MSH5-201ENST00000375703 RSAD2Q8WXG1 361 aa15.29■□□□□ 0.04
MSH5-201ENST00000375703 ZNF75CPQ92670 426 aaPredicted RBP15.29■□□□□ 0.04
MSH5-201ENST00000375703 STRIP2Q9ULQ0 834 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms