RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 ZCCHC18P0CG32 403 aa17.56■□□□□ 0.4
VARS-215ENST00000375663 VCPP55072 806 aaKnown RBP17.56■□□□□ 0.4
VARS-215ENST00000375663 CCNA1P78396 465 aa17.56■□□□□ 0.4
VARS-215ENST00000375663 SLC12A1Q13621 1099 aa17.56■□□□□ 0.4
VARS-215ENST00000375663 PTK6Q13882 451 aa17.56■□□□□ 0.4
VARS-215ENST00000375663 CRELD2Q6UXH1 353 aaPredicted RBP17.56■□□□□ 0.4
VARS-215ENST00000375663 C4orf19Q8IY42 314 aa17.56■□□□□ 0.4
VARS-215ENST00000375663 ABRAQ8N0Z2 381 aa17.56■□□□□ 0.4
VARS-215ENST00000375663 BAG5Q9UL15 447 aa17.56■□□□□ 0.4
VARS-215ENST00000375663 SCAF8Q9UPN6 1271 aaKnown RBP17.56■□□□□ 0.4
VARS-215ENST00000375663 NFIBO00712 420 aa17.56■□□□□ 0.4
VARS-215ENST00000375663 AIM2O14862 343 aa17.56■□□□□ 0.4
VARS-215ENST00000375663 HUS1O60921 280 aa17.56■□□□□ 0.4
VARS-215ENST00000375663 ENO3P13929 434 aaPredicted RBP17.56■□□□□ 0.4
VARS-215ENST00000375663 MMP13P45452 471 aa17.56■□□□□ 0.4
VARS-215ENST00000375663 MXD4Q14582 209 aaPredicted RBP17.56■□□□□ 0.4
VARS-215ENST00000375663 EFHC2Q5JST6 749 aa17.56■□□□□ 0.4
VARS-215ENST00000375663 BEST2Q8NFU1 509 aa17.56■□□□□ 0.4
VARS-215ENST00000375663 ATP6V1E2Q96A05 226 aa17.56■□□□□ 0.4
VARS-215ENST00000375663 PCDH9Q9HC56 1237 aa17.56■□□□□ 0.4
VARS-215ENST00000375663 MRPL40Q9NQ50 206 aaKnown RBP17.56■□□□□ 0.4
VARS-215ENST00000375663 APOEP02649 317 aa17.56■□□□□ 0.4
VARS-215ENST00000375663 MAPTP10636 758 aaKnown RBP17.56■□□□□ 0.4
VARS-215ENST00000375663 SSTR1P30872 391 aa17.56■□□□□ 0.4
VARS-215ENST00000375663 NME3Q13232 169 aa17.56■□□□□ 0.4
VARS-215ENST00000375663 RASA2Q15283 850 aa17.56■□□□□ 0.4
VARS-215ENST00000375663 MTFR1Q15390 333 aa17.56■□□□□ 0.4
VARS-215ENST00000375663 CYTH1Q15438 398 aa17.56■□□□□ 0.4
VARS-215ENST00000375663 FASTKD1Q53R41 847 aaKnown RBP17.56■□□□□ 0.4
VARS-215ENST00000375663 ANKRD27Q96NW4 1050 aa17.56■□□□□ 0.4
VARS-215ENST00000375663 TMEM120AQ9BXJ8 343 aa17.56■□□□□ 0.4
VARS-215ENST00000375663 NEUROG2Q9H2A3 272 aa17.56■□□□□ 0.4
VARS-215ENST00000375663 PDP2Q9P2J9 529 aa17.56■□□□□ 0.4
VARS-215ENST00000375663 TMEM150BA6NC51 233 aa17.55■□□□□ 0.4
VARS-215ENST00000375663 GNGT2O14610 69 aa17.55■□□□□ 0.4
VARS-215ENST00000375663 GYS1P13807 737 aa17.55■□□□□ 0.4
VARS-215ENST00000375663 CDC25CP30307 473 aa17.55■□□□□ 0.4
VARS-215ENST00000375663 DDR1Q08345 913 aa17.55■□□□□ 0.4
VARS-215ENST00000375663 KPNB1Q14974 876 aaKnown RBP17.55■□□□□ 0.4
VARS-215ENST00000375663 UBA3Q8TBC4 463 aa17.55■□□□□ 0.4
VARS-215ENST00000375663 TCP10LQ8TDR4 215 aa17.55■□□□□ 0.4
VARS-215ENST00000375663 ATXN2Q99700 1313 aaKnown RBP17.55■□□□□ 0.4
VARS-215ENST00000375663 E2F8A0AVK6 867 aa17.55■□□□□ 0.4
VARS-215ENST00000375663 ADAMTS3O15072 1205 aa17.55■□□□□ 0.4
VARS-215ENST00000375663 GPD1P21695 349 aa17.55■□□□□ 0.4
VARS-215ENST00000375663 BGNP21810 368 aa17.55■□□□□ 0.4
VARS-215ENST00000375663 SOX10P56693 466 aa17.55■□□□□ 0.4
VARS-215ENST00000375663 GCNT1Q02742 428 aa17.55■□□□□ 0.4
VARS-215ENST00000375663 MFSD7Q6UXD7 560 aa17.55■□□□□ 0.4
VARS-215ENST00000375663 SEPT1Q8WYJ6 367 aa17.55■□□□□ 0.4
VARS-215ENST00000375663 KAT2BQ92831 832 aa17.55■□□□□ 0.4
VARS-215ENST00000375663 ATG4CQ96DT6 458 aa17.55■□□□□ 0.4
VARS-215ENST00000375663 GJD4Q96KN9 370 aaPredicted RBP17.55■□□□□ 0.4
VARS-215ENST00000375663 SPATA33Q96N06 139 aa17.55■□□□□ 0.4
VARS-215ENST00000375663 AVENQ9NQS1 362 aaPredicted RBP17.55■□□□□ 0.4
VARS-215ENST00000375663 SLC5A4Q9NY91 659 aa17.55■□□□□ 0.4
VARS-215ENST00000375663 DNPEPQ9ULA0 475 aa17.55■□□□□ 0.4
VARS-215ENST00000375663 SNX9Q9Y5X1 595 aa17.55■□□□□ 0.4
VARS-215ENST00000375663 CYP3A7-CYP3A51PA0A087WV96 503 aa17.55■□□□□ 0.4
VARS-215ENST00000375663 DCDC2CA8MYV0 355 aa17.55■□□□□ 0.4
VARS-215ENST00000375663 TGFB1I1O43294 461 aa17.55■□□□□ 0.4
VARS-215ENST00000375663 LCP1P13796 627 aa17.55■□□□□ 0.4
VARS-215ENST00000375663 PAMP19021 973 aa17.55■□□□□ 0.4
VARS-215ENST00000375663 CYP3A7P24462 503 aa17.55■□□□□ 0.4
VARS-215ENST00000375663 PPATQ06203 517 aa17.55■□□□□ 0.4
VARS-215ENST00000375663 EFTUD2Q15029 972 aaKnown RBP eCLIP17.55■□□□□ 0.41e-6■■■■■ 35.6
VARS-215ENST00000375663 WASHC2DQ5SRD0 308 aa17.55■□□□□ 0.4
VARS-215ENST00000375663 XRRA1Q6P2D8 792 aa17.55■□□□□ 0.4
VARS-215ENST00000375663 LCA5Q86VQ0 697 aa17.55■□□□□ 0.4
VARS-215ENST00000375663 CDR2LQ86X02 465 aaPredicted RBP17.55■□□□□ 0.4
VARS-215ENST00000375663 RASGEF1CQ8N431 466 aa17.55■□□□□ 0.4
VARS-215ENST00000375663 RIMBP3CA6NJZ7 1639 aa17.54■□□□□ 0.4
VARS-215ENST00000375663 RIMBP3BA6NNM3 1639 aa17.54■□□□□ 0.4
VARS-215ENST00000375663 RIMBP3Q9UFD9 1639 aa17.54■□□□□ 0.4
VARS-215ENST00000375663 SPATA31C1P0DKV0 1188 aa17.54■□□□□ 0.4
VARS-215ENST00000375663 MTHFD1LQ6UB35 978 aa17.54■□□□□ 0.4
VARS-215ENST00000375663 MYLK4Q86YV6 388 aaPredicted RBP17.54■□□□□ 0.4
VARS-215ENST00000375663 SCUBE1Q8IWY4 988 aa17.54■□□□□ 0.4
VARS-215ENST00000375663 FNDC3AQ9Y2H6 1198 aaKnown RBP17.54■□□□□ 0.4
VARS-215ENST00000375663 TM9SF1O15321 606 aa17.54■□□□□ 0.4
VARS-215ENST00000375663 SLC4A1P02730 911 aa17.54■□□□□ 0.4
VARS-215ENST00000375663 PYGBP11216 843 aa17.54■□□□□ 0.4
VARS-215ENST00000375663 COPAP53621 1224 aa17.54■□□□□ 0.4
VARS-215ENST00000375663 C1QBPQ07021 282 aaKnown RBP17.54■□□□□ 0.4
VARS-215ENST00000375663 SNX30Q5VWJ9 437 aa17.54■□□□□ 0.4
VARS-215ENST00000375663 CATSPER1Q8NEC5 780 aa17.54■□□□□ 0.4
VARS-215ENST00000375663 STK32AQ8WU08 396 aa17.54■□□□□ 0.4
VARS-215ENST00000375663 MIEF2Q96C03 454 aa17.54■□□□□ 0.4
VARS-215ENST00000375663 HAUS8Q9BT25 410 aa17.54■□□□□ 0.4
VARS-215ENST00000375663 MTMR12Q9C0I1 747 aa17.54■□□□□ 0.4
VARS-215ENST00000375663 MRPL46Q9H2W6 279 aaKnown RBP17.54■□□□□ 0.4
VARS-215ENST00000375663 PNMA3Q9UL41 463 aa17.54■□□□□ 0.4
VARS-215ENST00000375663 PPP1R12AO14974 1030 aaPredicted RBP17.54■□□□□ 0.4
VARS-215ENST00000375663 IL1RL1Q01638 556 aa17.54■□□□□ 0.4
VARS-215ENST00000375663 HYIQ5T013 277 aa17.54■□□□□ 0.4
VARS-215ENST00000375663 SCG3Q8WXD2 468 aaKnown RBP17.54■□□□□ 0.4
VARS-215ENST00000375663 FSD1LQ9BXM9 530 aa17.54■□□□□ 0.4
VARS-215ENST00000375663 ERVK-5Q9HDB9 667 aa17.54■□□□□ 0.4
VARS-215ENST00000375663 ZCWPW2Q504Y3 356 aa17.53■□□□□ 0.4
VARS-215ENST00000375663 RNF135Q8IUD6 432 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms