RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 ZNF148Q9UQR1 794 aa12.77□□□□□ -0.37
C9orf3-203ENST00000375315 PTPN22Q9Y2R2 807 aa12.77□□□□□ -0.37
C9orf3-203ENST00000375315 DNAH12Q6ZR08 3092 aa12.77□□□□□ -0.37
C9orf3-203ENST00000375315 KDM3AQ9Y4C1 1321 aa12.77□□□□□ -0.37
C9orf3-203ENST00000375315 MIF4GDA9UHW6 222 aaKnown RBP12.77□□□□□ -0.37
C9orf3-203ENST00000375315 GCNT3O95395 438 aa12.77□□□□□ -0.37
C9orf3-203ENST00000375315 NMT1P30419 496 aaKnown RBP12.77□□□□□ -0.37
C9orf3-203ENST00000375315 NR1H3Q13133 447 aa12.77□□□□□ -0.37
C9orf3-203ENST00000375315 MED21Q13503 144 aa12.77□□□□□ -0.37
C9orf3-203ENST00000375315 UGCGQ16739 394 aa12.77□□□□□ -0.37
C9orf3-203ENST00000375315 CTC1Q2NKJ3 1217 aa12.77□□□□□ -0.37
C9orf3-203ENST00000375315 CCDC62Q6P9F0 684 aa12.77□□□□□ -0.37
C9orf3-203ENST00000375315 CCDC65Q8IXS2 484 aa12.77□□□□□ -0.37
C9orf3-203ENST00000375315 REPS2Q8NFH8 660 aa12.77□□□□□ -0.37
C9orf3-203ENST00000375315 PIP4K2CQ8TBX8 421 aa12.77□□□□□ -0.37
C9orf3-203ENST00000375315 NSUN6Q8TEA1 469 aaKnown RBP12.77□□□□□ -0.37
C9orf3-203ENST00000375315 SPOCK2Q92563 424 aa12.77□□□□□ -0.37
C9orf3-203ENST00000375315 ALG3Q92685 438 aa12.77□□□□□ -0.37
C9orf3-203ENST00000375315 DNAJC1Q96KC8 554 aaKnown RBP12.77□□□□□ -0.37
C9orf3-203ENST00000375315 OXCT2Q9BYC2 517 aaPredicted RBP12.77□□□□□ -0.37
C9orf3-203ENST00000375315 BRD8Q9H0E9 1235 aa12.77□□□□□ -0.37
C9orf3-203ENST00000375315 PORCNQ9H237 461 aa12.77□□□□□ -0.37
C9orf3-203ENST00000375315 GPRC5CQ9NQ84 441 aa12.77□□□□□ -0.37
C9orf3-203ENST00000375315 TBCCD1Q9NVR7 557 aa12.77□□□□□ -0.37
C9orf3-203ENST00000375315 WHRNQ9P202 907 aa12.77□□□□□ -0.37
C9orf3-203ENST00000375315 ATAD5Q96QE3 1844 aa12.76□□□□□ -0.37
C9orf3-203ENST00000375315 CCL15-CCL14A0A0B4J2E2 113 aa12.76□□□□□ -0.37
C9orf3-203ENST00000375315 CFAP69A5D8W1 941 aa12.76□□□□□ -0.37
C9orf3-203ENST00000375315 ANKRD63C9JTQ0 380 aa12.76□□□□□ -0.37
C9orf3-203ENST00000375315 F8W8V4 182 aa12.76□□□□□ -0.37
C9orf3-203ENST00000375315 TBCAO75347 108 aaKnown RBP12.76□□□□□ -0.37
C9orf3-203ENST00000375315 CYP3A4P08684 503 aa12.76□□□□□ -0.37
C9orf3-203ENST00000375315 COILP38432 576 aaPredicted RBP12.76□□□□□ -0.37
C9orf3-203ENST00000375315 CETN2P41208 172 aa12.76□□□□□ -0.37
C9orf3-203ENST00000375315 OXCT1P55809 520 aa12.76□□□□□ -0.37
C9orf3-203ENST00000375315 CDC16Q13042 620 aa12.76□□□□□ -0.37
C9orf3-203ENST00000375315 CCL15Q16663 113 aa12.76□□□□□ -0.37
C9orf3-203ENST00000375315 SATL1Q86VE3 508 aa12.76□□□□□ -0.37
C9orf3-203ENST00000375315 RDH13Q8NBN7 331 aa12.76□□□□□ -0.37
C9orf3-203ENST00000375315 DIS3LQ8TF46 1054 aaKnown RBP12.76□□□□□ -0.37
C9orf3-203ENST00000375315 PPP1R13LQ8WUF5 828 aa12.76□□□□□ -0.37
C9orf3-203ENST00000375315 DNAJC19Q96DA6 116 aa12.76□□□□□ -0.37
C9orf3-203ENST00000375315 TSPAN18Q96SJ8 248 aa12.76□□□□□ -0.37
C9orf3-203ENST00000375315 DNAJB4Q9UDY4 337 aa12.76□□□□□ -0.37
C9orf3-203ENST00000375315 SUN2Q9UH99 717 aa12.76□□□□□ -0.37
C9orf3-203ENST00000375315 ARHGEF35A5YM69 484 aa12.76□□□□□ -0.37
C9orf3-203ENST00000375315 FAM13AO94988 1023 aa12.76□□□□□ -0.37
C9orf3-203ENST00000375315 GAS8O95995 478 aa12.76□□□□□ -0.37
C9orf3-203ENST00000375315 SLC9A1P19634 815 aa12.76□□□□□ -0.37
C9orf3-203ENST00000375315 ORC2Q13416 577 aaPredicted RBP12.76□□□□□ -0.37
C9orf3-203ENST00000375315 HSP90AA5PQ58FG0 334 aa12.76□□□□□ -0.37
C9orf3-203ENST00000375315 TMEM63BQ5T3F8 832 aa12.76□□□□□ -0.37
C9orf3-203ENST00000375315 ZNF668Q96K58 619 aaPredicted RBP12.76□□□□□ -0.37
C9orf3-203ENST00000375315 GBA2Q9HCG7 927 aaPredicted RBP12.76□□□□□ -0.37
C9orf3-203ENST00000375315 BIRC5O15392 142 aa12.75□□□□□ -0.37
C9orf3-203ENST00000375315 CIB2O75838 187 aa12.75□□□□□ -0.37
C9orf3-203ENST00000375315 ABCB4P21439 1286 aa12.75□□□□□ -0.37
C9orf3-203ENST00000375315 PGM1P36871 562 aa12.75□□□□□ -0.37
C9orf3-203ENST00000375315 GALK1P51570 392 aa12.75□□□□□ -0.37
C9orf3-203ENST00000375315 HUNKP57058 714 aa12.75□□□□□ -0.37
C9orf3-203ENST00000375315 ASPHQ12797 758 aa12.75□□□□□ -0.37
C9orf3-203ENST00000375315 STAT4Q14765 748 aa12.75□□□□□ -0.37
C9orf3-203ENST00000375315 NOL9Q5SY16 702 aaKnown RBP12.75□□□□□ -0.37
C9orf3-203ENST00000375315 GJC2Q5T442 439 aaPredicted RBP12.75□□□□□ -0.37
C9orf3-203ENST00000375315 SWSAP1Q6NVH7 229 aa12.75□□□□□ -0.37
C9orf3-203ENST00000375315 LBX2Q6XYB7 198 aa12.75□□□□□ -0.37
C9orf3-203ENST00000375315 SLC5A5Q92911 643 aa12.75□□□□□ -0.37
C9orf3-203ENST00000375315 PTCD3Q96EY7 689 aaKnown RBP12.75□□□□□ -0.37
C9orf3-203ENST00000375315 MBOAT7Q96N66 472 aa12.75□□□□□ -0.37
C9orf3-203ENST00000375315 AGO4Q9HCK5 861 aaKnown RBP12.75□□□□□ -0.37
C9orf3-203ENST00000375315 NPHS2Q9NP85 383 aa12.75□□□□□ -0.37
C9orf3-203ENST00000375315 ARL8BQ9NVJ2 186 aa12.75□□□□□ -0.37
C9orf3-203ENST00000375315 ZNF711Q9Y462 761 aa12.75□□□□□ -0.37
C9orf3-203ENST00000375315 BAG2O95816 211 aa12.75□□□□□ -0.37
C9orf3-203ENST00000375315 ESRRAP11474 423 aaPredicted RBP12.75□□□□□ -0.37
C9orf3-203ENST00000375315 HARSP12081 509 aaKnown RBP12.75□□□□□ -0.37
C9orf3-203ENST00000375315 ALOX15P16050 662 aaPredicted RBP12.75□□□□□ -0.37
C9orf3-203ENST00000375315 CCND2P30279 289 aa12.75□□□□□ -0.37
C9orf3-203ENST00000375315 SERPINB8P50452 374 aa12.75□□□□□ -0.37
C9orf3-203ENST00000375315 TMED2Q15363 201 aa12.75□□□□□ -0.37
C9orf3-203ENST00000375315 GRAMD4Q6IC98 578 aa12.75□□□□□ -0.37
C9orf3-203ENST00000375315 ZC3H15Q8WU90 426 aaKnown RBP12.75□□□□□ -0.37
C9orf3-203ENST00000375315 AAASQ9NRG9 546 aa12.75□□□□□ -0.37
C9orf3-203ENST00000375315 GINM1Q9NU53 330 aa12.75□□□□□ -0.37
C9orf3-203ENST00000375315 TYW1Q9NV66 732 aaKnown RBP12.75□□□□□ -0.37
C9orf3-203ENST00000375315 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.75□□□□□ -0.37
C9orf3-203ENST00000375315 CCDC160A6NGH7 325 aa12.75□□□□□ -0.37
C9orf3-203ENST00000375315 SPAG7O75391 227 aa12.75□□□□□ -0.37
C9orf3-203ENST00000375315 CCNE2O96020 404 aa12.75□□□□□ -0.37
C9orf3-203ENST00000375315 ITIH2P19823 946 aa12.75□□□□□ -0.37
C9orf3-203ENST00000375315 SLC12A3P55017 1021 aa12.75□□□□□ -0.37
C9orf3-203ENST00000375315 ZBTB16Q05516 673 aa12.75□□□□□ -0.37
C9orf3-203ENST00000375315 XKR9Q5GH70 373 aa12.75□□□□□ -0.37
C9orf3-203ENST00000375315 PCNX4Q63HM2 1172 aa12.75□□□□□ -0.37
C9orf3-203ENST00000375315 MOXD1Q6UVY6 613 aa12.75□□□□□ -0.37
C9orf3-203ENST00000375315 RASSF3Q86WH2 238 aa12.75□□□□□ -0.37
C9orf3-203ENST00000375315 SYT2Q8N9I0 419 aaPredicted RBP12.75□□□□□ -0.37
C9orf3-203ENST00000375315 C12orf42Q96LP6 360 aa12.75□□□□□ -0.37
C9orf3-203ENST00000375315 ARHGEF38Q9NXL2 777 aa12.75□□□□□ -0.37
C9orf3-203ENST00000375315 RBPJLQ9UBG7 517 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms