RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 AKAP10O43572 662 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 BNIP3LO60238 219 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 PDGFRBP09619 1106 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 CALB2P22676 271 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 CAPRIN1Q14444 709 aaKnown RBP12.03□□□□□ -0.48
PTCH1-203ENST00000375274 INPP5AQ14642 412 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 PDK1Q15118 436 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 IMPG1Q17R60 797 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 SEZ6Q53EL9 994 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 KDELC2Q7Z4H8 507 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 CD302Q8IX05 232 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 GLIS3Q8NEA6 775 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 CYP2W1Q8TAV3 490 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 GFM2Q969S9 779 aaKnown RBP12.03□□□□□ -0.48
PTCH1-203ENST00000375274 MED15Q96RN5 788 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 IL18RAPO95256 599 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 MAP3K6O95382 1288 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 GNAT1P11488 350 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 PRKCIP41743 596 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 IER5Q5VY09 327 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 ANGPTL8Q6UXH0 198 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 LRRC55Q6ZSA7 311 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 YTHDF3Q7Z739 585 aaKnown RBP12.03□□□□□ -0.48
PTCH1-203ENST00000375274 IFNEQ86WN2 208 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 APOBEC3FQ8IUX4 373 aaKnown RBP12.03□□□□□ -0.48
PTCH1-203ENST00000375274 LRRC71Q8N4P6 559 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 MREGQ8N565 214 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 GMCL1Q96IK5 515 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 FRMD8P1Q9BZ68 369 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-203ENST00000375274 SP110Q9HB58 689 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 MRGBPQ9NV56 204 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 ARHGAP26Q9UNA1 814 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 ICAM1P05362 532 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 TNFRSF8P28908 595 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 COBLL1Q53SF7 1204 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 PCNX4Q63HM2 1172 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 CDR2LQ86X02 465 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-203ENST00000375274 CEP19Q96LK0 163 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 SMARCAD1Q9H4L7 1026 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 ABCF3Q9NUQ8 709 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 E5RI56 91 aa12.02□□□□□ -0.48
PTCH1-203ENST00000375274 ZCCHC18P0CG32 403 aa12.02□□□□□ -0.48
PTCH1-203ENST00000375274 PBX1P40424 430 aa12.02□□□□□ -0.48
PTCH1-203ENST00000375274 SLC30A10Q6XR72 485 aa12.02□□□□□ -0.48
PTCH1-203ENST00000375274 PRUNE1Q86TP1 453 aa12.02□□□□□ -0.48
PTCH1-203ENST00000375274 ZNF280CQ8ND82 737 aa12.02□□□□□ -0.48
PTCH1-203ENST00000375274 GPRASP2Q96D09 838 aa12.02□□□□□ -0.48
PTCH1-203ENST00000375274 MTMR9Q96QG7 549 aa12.02□□□□□ -0.48
PTCH1-203ENST00000375274 TMEM39BQ9GZU3 492 aa12.02□□□□□ -0.48
PTCH1-203ENST00000375274 POLLQ9UGP5 575 aa12.02□□□□□ -0.48
PTCH1-203ENST00000375274 ZNRF3Q9ULT6 936 aa12.02□□□□□ -0.48
PTCH1-203ENST00000375274 PIK3CDO00329 1044 aa12.02□□□□□ -0.49
PTCH1-203ENST00000375274 DSG1Q02413 1049 aa12.02□□□□□ -0.49
PTCH1-203ENST00000375274 FLOT2Q14254 428 aa12.02□□□□□ -0.49
PTCH1-203ENST00000375274 SCUBE1Q8IWY4 988 aa12.02□□□□□ -0.49
PTCH1-203ENST00000375274 PCYOX1LQ8NBM8 494 aa12.02□□□□□ -0.49
PTCH1-203ENST00000375274 PPHLN1Q8NEY8 458 aaKnown RBP12.02□□□□□ -0.49
PTCH1-203ENST00000375274 TATDN2Q93075 761 aa12.02□□□□□ -0.49
PTCH1-203ENST00000375274 ATG4CQ96DT6 458 aa12.02□□□□□ -0.49
PTCH1-203ENST00000375274 OTUD5Q96G74 571 aa12.02□□□□□ -0.49
PTCH1-203ENST00000375274 ATF5Q9Y2D1 282 aaPredicted RBP12.02□□□□□ -0.49
PTCH1-203ENST00000375274 REXO2Q9Y3B8 237 aaKnown RBP12.02□□□□□ -0.49
PTCH1-203ENST00000375274 PCDHA3Q9Y5H8 950 aa12.02□□□□□ -0.49
PTCH1-203ENST00000375274 RNF225M0QZC1 329 aaPredicted RBP12.02□□□□□ -0.49
PTCH1-203ENST00000375274 OGTO15294 1046 aa12.02□□□□□ -0.49
PTCH1-203ENST00000375274 KCNA2P16389 499 aa12.02□□□□□ -0.49
PTCH1-203ENST00000375274 HNRNPH3P31942 346 aaKnown RBP12.02□□□□□ -0.49
PTCH1-203ENST00000375274 FOXD4Q12950 439 aaPredicted RBP12.02□□□□□ -0.49
PTCH1-203ENST00000375274 CLEC16AQ2KHT3 1053 aa12.02□□□□□ -0.49
PTCH1-203ENST00000375274 ZCWPW2Q504Y3 356 aa12.02□□□□□ -0.49
PTCH1-203ENST00000375274 BTBD8Q5XKL5 378 aa12.02□□□□□ -0.49
PTCH1-203ENST00000375274 SPOCD1Q6ZMY3 1216 aa12.02□□□□□ -0.49
PTCH1-203ENST00000375274 SLC26A11Q86WA9 606 aa12.02□□□□□ -0.49
PTCH1-203ENST00000375274 APLFQ8IW19 511 aaPredicted RBP12.02□□□□□ -0.49
PTCH1-203ENST00000375274 MMP19Q99542 508 aa12.02□□□□□ -0.49
PTCH1-203ENST00000375274 SPON2Q9BUD6 331 aa12.02□□□□□ -0.49
PTCH1-203ENST00000375274 EIF2AQ9BY44 585 aaKnown RBP12.02□□□□□ -0.49
PTCH1-203ENST00000375274 PRMT7Q9NVM4 692 aaPredicted RBP12.02□□□□□ -0.49
PTCH1-203ENST00000375274 PKD2L2Q9NZM6 624 aa12.02□□□□□ -0.49
PTCH1-203ENST00000375274 DGKIO75912 1065 aa12.02□□□□□ -0.49
PTCH1-203ENST00000375274 ATP6V1B1P15313 513 aa12.02□□□□□ -0.49
PTCH1-203ENST00000375274 ITGB3BPQ13352 177 aaPredicted RBP12.02□□□□□ -0.49
PTCH1-203ENST00000375274 BAP1Q92560 729 aa12.02□□□□□ -0.49
PTCH1-203ENST00000375274 DCLK3Q9C098 648 aa12.02□□□□□ -0.49
PTCH1-203ENST00000375274 SHOC2Q9UQ13 582 aa12.02□□□□□ -0.49
PTCH1-203ENST00000375274 PTGER2P43116 358 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 HDAC4P56524 1084 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 RASA2Q15283 850 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 MCOLN2Q8IZK6 566 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 USP33Q8TEY7 942 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 HPDLQ96IR7 371 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 GJD4Q96KN9 370 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-203ENST00000375274 ZNF518BQ9C0D4 1074 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 LRFN2Q9ULH4 789 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 RPS6KL1Q9Y6S9 549 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 SRRM3A6NNA2 597 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-203ENST00000375274 C19orf81C9J6K1 198 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 FAM86B1E9PN63 330 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 EEF2KO00418 725 aaKnown RBP12.01□□□□□ -0.49
PTCH1-203ENST00000375274 GLRA3O75311 464 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms