RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 C15orf41Q9Y2V0 281 aa20.6■□□□□ 0.89
COL15A1-201ENST00000375001 TPI1P60174 286 aa20.6■□□□□ 0.89
COL15A1-201ENST00000375001 PLIN5Q00G26 463 aa20.6■□□□□ 0.89
COL15A1-201ENST00000375001 SGO1Q5FBB7 561 aa20.6■□□□□ 0.89
COL15A1-201ENST00000375001 ZBTB49Q6ZSB9 765 aa20.6■□□□□ 0.89
COL15A1-201ENST00000375001 C19orf18Q8NEA5 215 aa20.6■□□□□ 0.89
COL15A1-201ENST00000375001 BEST2Q8NFU1 509 aa20.6■□□□□ 0.89
COL15A1-201ENST00000375001 TNIP2Q8NFZ5 429 aa20.6■□□□□ 0.89
COL15A1-201ENST00000375001 MCEEQ96PE7 176 aa20.6■□□□□ 0.89
COL15A1-201ENST00000375001 RMDN3Q96TC7 470 aa20.6■□□□□ 0.89
COL15A1-201ENST00000375001 PDS5AQ29RF7 1337 aaKnown RBP20.6■□□□□ 0.89
COL15A1-201ENST00000375001 TAF4O00268 1085 aa20.6■□□□□ 0.89
COL15A1-201ENST00000375001 ATMINO43313 823 aaPredicted RBP20.6■□□□□ 0.89
COL15A1-201ENST00000375001 HIST1H2AGP0C0S8 130 aaPredicted RBP20.6■□□□□ 0.89
COL15A1-201ENST00000375001 HIST1H2ADP20671 130 aa20.6■□□□□ 0.89
COL15A1-201ENST00000375001 PTPN4P29074 926 aa20.6■□□□□ 0.89
COL15A1-201ENST00000375001 CRKP46108 304 aa20.6■□□□□ 0.89
COL15A1-201ENST00000375001 FLAD1Q8NFF5 587 aa20.6■□□□□ 0.89
COL15A1-201ENST00000375001 TADA1Q96BN2 335 aa20.6■□□□□ 0.89
COL15A1-201ENST00000375001 HIST1H2AHQ96KK5 128 aa20.6■□□□□ 0.89
COL15A1-201ENST00000375001 HIST1H2AJQ99878 128 aa20.6■□□□□ 0.89
COL15A1-201ENST00000375001 H2AFJQ9BTM1 129 aa20.6■□□□□ 0.89
COL15A1-201ENST00000375001 FAM129AQ9BZQ8 928 aa20.6■□□□□ 0.89
COL15A1-201ENST00000375001 EFCAB1Q9HAE3 211 aa20.6■□□□□ 0.89
COL15A1-201ENST00000375001 IL12RB1P42701 662 aa20.59■□□□□ 0.89
COL15A1-201ENST00000375001 USP11P51784 963 aa20.59■□□□□ 0.89
COL15A1-201ENST00000375001 INAQ16352 499 aa20.59■□□□□ 0.89
COL15A1-201ENST00000375001 REXO4Q9GZR2 422 aaKnown RBP20.59■□□□□ 0.89
COL15A1-201ENST00000375001 CD274Q9NZQ7 290 aa20.59■□□□□ 0.89
COL15A1-201ENST00000375001 SELENONQ9NZV5 590 aa20.59■□□□□ 0.89
COL15A1-201ENST00000375001 PIPSLA2A3N6 862 aa20.59■□□□□ 0.89
COL15A1-201ENST00000375001 UBE2Q2LH0YL09 131 aa20.59■□□□□ 0.89
COL15A1-201ENST00000375001 HSD17B4P51659 736 aa20.59■□□□□ 0.89
COL15A1-201ENST00000375001 SNX30Q5VWJ9 437 aa20.59■□□□□ 0.89
COL15A1-201ENST00000375001 SLC39A10Q9ULF5 831 aa20.59■□□□□ 0.89
COL15A1-201ENST00000375001 ZCCHC11Q5TAX3 1644 aaKnown RBP20.59■□□□□ 0.89
COL15A1-201ENST00000375001 TRPC5OSA6NMA1 111 aa20.59■□□□□ 0.89
COL15A1-201ENST00000375001 F8VZ95 297 aa20.59■□□□□ 0.89
COL15A1-201ENST00000375001 ZNF862O60290 1169 aa20.59■□□□□ 0.89
COL15A1-201ENST00000375001 PLEKP08567 350 aaPredicted RBP20.59■□□□□ 0.89
COL15A1-201ENST00000375001 PDGFRAP16234 1089 aa20.59■□□□□ 0.89
COL15A1-201ENST00000375001 DDX5P17844 614 aaKnown RBP20.59■□□□□ 0.89
COL15A1-201ENST00000375001 C21orf59P57076 290 aa20.59■□□□□ 0.89
COL15A1-201ENST00000375001 AFG1LQ8WV93 481 aa20.59■□□□□ 0.89
COL15A1-201ENST00000375001 CEP44Q9C0F1 390 aa20.59■□□□□ 0.89
COL15A1-201ENST00000375001 ROGDIQ9GZN7 287 aa20.59■□□□□ 0.89
COL15A1-201ENST00000375001 SPRTNQ9H040 489 aaPredicted RBP20.59■□□□□ 0.89
COL15A1-201ENST00000375001 EPS8L2Q9H6S3 715 aa20.59■□□□□ 0.89
COL15A1-201ENST00000375001 F5H6K3 240 aa20.59■□□□□ 0.89
COL15A1-201ENST00000375001 SLC16A1P53985 500 aa20.59■□□□□ 0.89
COL15A1-201ENST00000375001 KLRC3Q07444 240 aa20.59■□□□□ 0.89
COL15A1-201ENST00000375001 TRIM28Q13263 835 aaKnown RBP20.59■□□□□ 0.89
COL15A1-201ENST00000375001 RBM43Q6ZSC3 357 aaKnown RBP20.59■□□□□ 0.89
COL15A1-201ENST00000375001 HAUS6Q7Z4H7 955 aa20.59■□□□□ 0.89
COL15A1-201ENST00000375001 ILKAPQ9H0C8 392 aaPredicted RBP20.59■□□□□ 0.89
COL15A1-201ENST00000375001 ZNF335Q9H4Z2 1342 aaPredicted RBP20.58■□□□□ 0.89
COL15A1-201ENST00000375001 SAC3D1A6NKF1 404 aa20.58■□□□□ 0.89
COL15A1-201ENST00000375001 P4HBP07237 508 aaKnown RBP20.58■□□□□ 0.89
COL15A1-201ENST00000375001 QARSP47897 775 aaKnown RBP20.58■□□□□ 0.89
COL15A1-201ENST00000375001 BFSP2Q13515 415 aa20.58■□□□□ 0.89
COL15A1-201ENST00000375001 EFHC1Q5JVL4 640 aa20.58■□□□□ 0.89
COL15A1-201ENST00000375001 ANKS3Q6ZW76 656 aa20.58■□□□□ 0.89
COL15A1-201ENST00000375001 RBBP8NLQ8NC74 664 aaPredicted RBP20.58■□□□□ 0.89
COL15A1-201ENST00000375001 NSUN4Q96CB9 384 aaKnown RBP20.58■□□□□ 0.89
COL15A1-201ENST00000375001 FKBP6O75344 327 aa20.58■□□□□ 0.89
COL15A1-201ENST00000375001 POLBP06746 335 aa20.58■□□□□ 0.89
COL15A1-201ENST00000375001 HSMCR30P0CW71 290 aa20.58■□□□□ 0.89
COL15A1-201ENST00000375001 RFC5P40937 340 aa20.58■□□□□ 0.89
COL15A1-201ENST00000375001 OLFML1Q6UWY5 402 aa20.58■□□□□ 0.89
COL15A1-201ENST00000375001 SLC25A41Q8N5S1 370 aa20.58■□□□□ 0.89
COL15A1-201ENST00000375001 APPL2Q8NEU8 664 aa20.58■□□□□ 0.89
COL15A1-201ENST00000375001 SPATA18Q8TC71 538 aa20.58■□□□□ 0.89
COL15A1-201ENST00000375001 PAK5Q9P286 719 aa20.58■□□□□ 0.89
COL15A1-201ENST00000375001 DDX20Q9UHI6 824 aaKnown RBP20.58■□□□□ 0.89
COL15A1-201ENST00000375001 CROCC2H7BZ55 1655 aa20.58■□□□□ 0.89
COL15A1-201ENST00000375001 GCNAQ96QF7 691 aa20.58■□□□□ 0.88
COL15A1-201ENST00000375001 LATS2Q9NRM7 1088 aa20.58■□□□□ 0.88
COL15A1-201ENST00000375001 RIC8BQ9NVN3 520 aa20.58■□□□□ 0.88
COL15A1-201ENST00000375001 CACNA2D2Q9NY47 1150 aa20.58■□□□□ 0.88
COL15A1-201ENST00000375001 AGO2Q9UKV8 859 aaKnown RBP20.58■□□□□ 0.88
COL15A1-201ENST00000375001 PKP3Q9Y446 797 aa20.58■□□□□ 0.88
COL15A1-201ENST00000375001 SERPIND1P05546 499 aa20.58■□□□□ 0.88
COL15A1-201ENST00000375001 CD44P16070 742 aaKnown RBP20.58■□□□□ 0.88
COL15A1-201ENST00000375001 CDC25CP30307 473 aa20.58■□□□□ 0.88
COL15A1-201ENST00000375001 PTPAQ15257 358 aa20.58■□□□□ 0.88
COL15A1-201ENST00000375001 SIX5Q8N196 739 aa20.58■□□□□ 0.88
COL15A1-201ENST00000375001 PRCCQ92733 491 aaPredicted RBP20.58■□□□□ 0.88
COL15A1-201ENST00000375001 LRCH1Q9Y2L9 728 aa20.58■□□□□ 0.88
COL15A1-201ENST00000375001 IPPQ9Y573 584 aa20.58■□□□□ 0.88
COL15A1-201ENST00000375001 CHRNB3Q05901 458 aa20.57■□□□□ 0.88
COL15A1-201ENST00000375001 CALML6Q8TD86 181 aa20.57■□□□□ 0.88
COL15A1-201ENST00000375001 ZNF483Q8TF39 744 aaPredicted RBP20.57■□□□□ 0.88
COL15A1-201ENST00000375001 C19orf60Q96EN9 201 aa20.57■□□□□ 0.88
COL15A1-201ENST00000375001 TBC1D22BQ9NU19 505 aa20.57■□□□□ 0.88
COL15A1-201ENST00000375001 TAGLN3Q9UI15 199 aa20.57■□□□□ 0.88
COL15A1-201ENST00000375001 CLASP2O75122 1294 aaKnown RBP20.57■□□□□ 0.88
COL15A1-201ENST00000375001 PSMC6P62333 389 aa20.57■□□□□ 0.88
COL15A1-201ENST00000375001 ACCSLQ4AC99 568 aa20.57■□□□□ 0.88
COL15A1-201ENST00000375001 CLVS1Q8IUQ0 354 aaPredicted RBP20.57■□□□□ 0.88
COL15A1-201ENST00000375001 POLR3FQ9H1D9 316 aaPredicted RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms