RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 HARSP12081 509 aaKnown RBP11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 SKILP12757 684 aa11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 SLC9A1P19634 815 aa11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 PON1P27169 355 aa11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 KRT9P35527 623 aa11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 GPC5P78333 572 aa11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 ZBED6P86452 979 aa11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 POU5F1Q01860 360 aaKnown RBP11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 CREMQ03060 361 aa11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 GOLGA8FQ08AF8 430 aa11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 GOLGA8DPQ0D2H9 430 aa11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 LRMPQ12912 555 aa11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 ZNF568Q3ZCX4 644 aa11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 CBWD6Q4V339 395 aa11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 CBWD3Q5JTY5 395 aa11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 CBWD5Q5RIA9 395 aa11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 LIN9Q5TKA1 542 aa11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 EEF1DP3Q658K8 133 aa11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 SLC27A1Q6PCB7 646 aa11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 HACE1Q8IYU2 909 aa11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 FNBP1Q96RU3 617 aa11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 ADPGKQ9BRR6 497 aa11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 TTYH3Q9C0H2 523 aa11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 PDZD7Q9H5P4 517 aa11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 FAM207AQ9NSI2 230 aaPredicted RBP11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 RBAKQ9NYW8 714 aaPredicted RBP11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 PARP2Q9UGN5 583 aa11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 CPSF3Q9UKF6 684 aaKnown RBP11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 ZKSCAN5Q9Y2L8 839 aa11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 EPG5Q9HCE0 2579 aa11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 NOTCH4Q99466 2003 aa11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 CACNA1BQ00975 2339 aa11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 CCL16O15467 120 aa11.73□□□□□ -0.53
HLA-DQA1-202ENST00000374949 FAM189A1O60320 539 aa11.73□□□□□ -0.53
HLA-DQA1-202ENST00000374949 C1RP00736 705 aa11.73□□□□□ -0.53
HLA-DQA1-202ENST00000374949 C8AP07357 584 aa11.73□□□□□ -0.53
HLA-DQA1-202ENST00000374949 DLATP10515 647 aaKnown RBP11.73□□□□□ -0.53
HLA-DQA1-202ENST00000374949 GCLMP48507 274 aa11.73□□□□□ -0.53
HLA-DQA1-202ENST00000374949 AP3M2P53677 418 aa11.73□□□□□ -0.53
HLA-DQA1-202ENST00000374949 CLDN10P78369 228 aa11.73□□□□□ -0.53
HLA-DQA1-202ENST00000374949 MYL7Q01449 175 aa11.73□□□□□ -0.53
HLA-DQA1-202ENST00000374949 PPP3CAQ08209 521 aa11.73□□□□□ -0.53
HLA-DQA1-202ENST00000374949 PSMD5Q16401 504 aa11.73□□□□□ -0.53
HLA-DQA1-202ENST00000374949 ZBTB41Q5SVQ8 909 aa11.73□□□□□ -0.53
HLA-DQA1-202ENST00000374949 KLHDC7AQ5VTJ3 777 aa11.73□□□□□ -0.53
HLA-DQA1-202ENST00000374949 KRT39Q6A163 491 aa11.73□□□□□ -0.53
HLA-DQA1-202ENST00000374949 CACNA2D4Q7Z3S7 1137 aa11.73□□□□□ -0.53
HLA-DQA1-202ENST00000374949 ZSCAN30Q86W11 494 aa11.73□□□□□ -0.53
HLA-DQA1-202ENST00000374949 CEP57Q86XR8 500 aa11.73□□□□□ -0.53
HLA-DQA1-202ENST00000374949 MAML2Q8IZL2 1156 aaPredicted RBP11.73□□□□□ -0.53
HLA-DQA1-202ENST00000374949 ITFG1Q8TB96 612 aa11.73□□□□□ -0.53
HLA-DQA1-202ENST00000374949 RUBCNQ92622 972 aa11.73□□□□□ -0.53
HLA-DQA1-202ENST00000374949 BAG1Q99933 345 aaPredicted RBP11.73□□□□□ -0.53
HLA-DQA1-202ENST00000374949 NAA15Q9BXJ9 866 aaKnown RBP11.73□□□□□ -0.53
HLA-DQA1-202ENST00000374949 CDT1Q9H211 546 aa11.73□□□□□ -0.53
HLA-DQA1-202ENST00000374949 CXCL16Q9H2A7 254 aa11.73□□□□□ -0.53
HLA-DQA1-202ENST00000374949 TMEM8AQ9HCN3 771 aa11.73□□□□□ -0.53
HLA-DQA1-202ENST00000374949 GCNT4Q9P109 453 aa11.73□□□□□ -0.53
HLA-DQA1-202ENST00000374949 CEP72Q9P209 647 aa11.73□□□□□ -0.53
HLA-DQA1-202ENST00000374949 CDH7Q9ULB5 785 aa11.73□□□□□ -0.53
HLA-DQA1-202ENST00000374949 POLIQ9UNA4 740 aa11.73□□□□□ -0.53
HLA-DQA1-202ENST00000374949 DAAM1Q9Y4D1 1078 aa11.73□□□□□ -0.53
HLA-DQA1-202ENST00000374949 TPRP12270 2363 aaKnown RBP11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 FRYLO94915 3013 aa11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 ADAM12O43184 909 aa11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 NOL4O94818 638 aa11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 IL18RAPO95256 599 aa11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 CLTAP09496 248 aa11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 HNRNPA1P09651 372 aaKnown RBP eCLIP11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 TNNI1P19237 187 aa11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 MSNP26038 577 aaKnown RBP11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 TNFSF9P41273 254 aa11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 MXI1P50539 228 aa11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 STARD6P59095 220 aa11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 POLR2FP61218 127 aaKnown RBP11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 CCZ1BP86790 482 aa11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 CCZ1P86791 482 aaPredicted RBP11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 TUSC3Q13454 348 aa11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 UBXN2BQ14CS0 331 aa11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 MLF2Q15773 248 aaPredicted RBP11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 DCAF4L1Q3SXM0 396 aa11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 SEZ6Q53EL9 994 aa11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 PPM1LQ5SGD2 360 aa11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 FAM171A1Q5VUB5 890 aa11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 DPY19L2P1Q6NXN4 242 aa11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 BRSK2Q8IWQ3 736 aa11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 GPR65Q8IYL9 337 aa11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 SUMF1Q8NBK3 374 aa11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 SLC7A14Q8TBB6 771 aa11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 PIK3R5Q8WYR1 880 aa11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 ZNF516Q92618 1163 aa11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 FGF13Q92913 245 aa11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 DNAJC7Q99615 494 aa11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 CGRRF1Q99675 332 aa11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 KXD1Q9BQD3 176 aa11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 CLSTN3Q9BQT9 956 aa11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 TTPALQ9BTX7 342 aa11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 INTS2Q9H0H0 1204 aaKnown RBP11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 NUCKS1Q9H1E3 243 aaKnown RBP11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 RPF1Q9H9Y2 349 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms