RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 TIMM13Q9Y5L4 95 aaPredicted RBP18.29■□□□□ 0.52
HLA-DMA-201ENST00000374843 NCANO14594 1321 aa18.28■□□□□ 0.52
HLA-DMA-201ENST00000374843 VWA8A3KMH1 1905 aa18.28■□□□□ 0.52
HLA-DMA-201ENST00000374843 RCCD1A6NED2 376 aa18.28■□□□□ 0.52
HLA-DMA-201ENST00000374843 BTNL10A8MVZ5 291 aa18.28■□□□□ 0.52
HLA-DMA-201ENST00000374843 ZNF500O60304 480 aaPredicted RBP18.28■□□□□ 0.52
HLA-DMA-201ENST00000374843 RTN2O75298 545 aa18.28■□□□□ 0.52
HLA-DMA-201ENST00000374843 MICAL2O94851 1124 aa18.28■□□□□ 0.52
HLA-DMA-201ENST00000374843 PPM1AP35813 382 aa18.28■□□□□ 0.52
HLA-DMA-201ENST00000374843 PBX3P40426 434 aa18.28■□□□□ 0.52
HLA-DMA-201ENST00000374843 YWHAHQ04917 246 aaPredicted RBP18.28■□□□□ 0.52
HLA-DMA-201ENST00000374843 MRPL58Q14197 206 aaKnown RBP18.28■□□□□ 0.52
HLA-DMA-201ENST00000374843 PKDCCQ504Y2 493 aa18.28■□□□□ 0.52
HLA-DMA-201ENST00000374843 INTS6LQ5JSJ4 861 aaKnown RBP18.28■□□□□ 0.52
HLA-DMA-201ENST00000374843 KIAA1328Q86T90 577 aa18.28■□□□□ 0.52
HLA-DMA-201ENST00000374843 C12orf29Q8N999 325 aa18.28■□□□□ 0.52
HLA-DMA-201ENST00000374843 CLP1Q92989 425 aaKnown RBP18.28■□□□□ 0.52
HLA-DMA-201ENST00000374843 RAD9AQ99638 391 aa18.28■□□□□ 0.52
HLA-DMA-201ENST00000374843 GPR62Q9BZJ7 368 aa18.28■□□□□ 0.52
HLA-DMA-201ENST00000374843 TSGA10Q9BZW7 698 aa18.28■□□□□ 0.52
HLA-DMA-201ENST00000374843 CRTAC1Q9NQ79 661 aa18.28■□□□□ 0.52
HLA-DMA-201ENST00000374843 CEP83Q9Y592 693 aa18.28■□□□□ 0.52
HLA-DMA-201ENST00000374843 PDGFRBP09619 1106 aa18.27■□□□□ 0.52
HLA-DMA-201ENST00000374843 H2AFZP0C0S5 128 aa18.27■□□□□ 0.52
HLA-DMA-201ENST00000374843 TMEM253P0C7T8 217 aa18.27■□□□□ 0.52
HLA-DMA-201ENST00000374843 SETSIPP0DME0 302 aa18.27■□□□□ 0.52
HLA-DMA-201ENST00000374843 PTPN1P18031 435 aaKnown RBP18.27■□□□□ 0.52
HLA-DMA-201ENST00000374843 ACAT1P24752 427 aaKnown RBP18.27■□□□□ 0.52
HLA-DMA-201ENST00000374843 PSMC1P62191 440 aaKnown RBP18.27■□□□□ 0.52
HLA-DMA-201ENST00000374843 GOLGA7BQ2TAP0 167 aa18.27■□□□□ 0.52
HLA-DMA-201ENST00000374843 VARS2Q5ST30 1063 aaKnown RBP18.27■□□□□ 0.52
HLA-DMA-201ENST00000374843 PPP1R26Q5T8A7 1209 aaPredicted RBP18.27■□□□□ 0.52
HLA-DMA-201ENST00000374843 FAM171A1Q5VUB5 890 aa18.27■□□□□ 0.52
HLA-DMA-201ENST00000374843 NAA35Q5VZE5 725 aa18.27■□□□□ 0.52
HLA-DMA-201ENST00000374843 ACAD10Q6JQN1 1059 aa18.27■□□□□ 0.52
HLA-DMA-201ENST00000374843 DENND1BQ6P3S1 775 aa18.27■□□□□ 0.52
HLA-DMA-201ENST00000374843 H2AFVQ71UI9 128 aa18.27■□□□□ 0.52
HLA-DMA-201ENST00000374843 MON1BQ7L1V2 547 aa18.27■□□□□ 0.52
HLA-DMA-201ENST00000374843 PHF13Q86YI8 300 aaPredicted RBP18.27■□□□□ 0.52
HLA-DMA-201ENST00000374843 PASD1Q8IV76 773 aa18.27■□□□□ 0.52
HLA-DMA-201ENST00000374843 TMEM35BQ8NCS4 154 aa18.27■□□□□ 0.52
HLA-DMA-201ENST00000374843 OR10T2Q8NGX3 314 aa18.27■□□□□ 0.52
HLA-DMA-201ENST00000374843 CYFIP2Q96F07 1278 aa18.27■□□□□ 0.52
HLA-DMA-201ENST00000374843 HNRNPABQ99729 332 aaKnown RBP18.27■□□□□ 0.52
HLA-DMA-201ENST00000374843 VN1R3Q9BXE9 311 aa18.27■□□□□ 0.52
HLA-DMA-201ENST00000374843 PACSIN1Q9BY11 444 aa18.27■□□□□ 0.52
HLA-DMA-201ENST00000374843 OXCT2Q9BYC2 517 aaPredicted RBP18.27■□□□□ 0.52
HLA-DMA-201ENST00000374843 LACRTQ9GZZ8 138 aa18.27■□□□□ 0.52
HLA-DMA-201ENST00000374843 PDCL3Q9H2J4 239 aa18.27■□□□□ 0.52
HLA-DMA-201ENST00000374843 AAASQ9NRG9 546 aa18.27■□□□□ 0.52
HLA-DMA-201ENST00000374843 TRMT1Q9NXH9 659 aaKnown RBP18.27■□□□□ 0.52
HLA-DMA-201ENST00000374843 TSPAN16Q9UKR8 245 aa18.27■□□□□ 0.52
HLA-DMA-201ENST00000374843 A0A0U1RQJ8 604 aa18.26■□□□□ 0.51
HLA-DMA-201ENST00000374843 ANKRD62A6NC57 917 aa18.26■□□□□ 0.51
HLA-DMA-201ENST00000374843 M0QYV0 167 aa18.26■□□□□ 0.51
HLA-DMA-201ENST00000374843 TBC1D4O60343 1298 aa18.26■□□□□ 0.51
HLA-DMA-201ENST00000374843 NSFP46459 744 aaKnown RBP18.26■□□□□ 0.51
HLA-DMA-201ENST00000374843 PLCB3Q01970 1234 aa18.26■□□□□ 0.51
HLA-DMA-201ENST00000374843 TCEAL1Q15170 157 aa18.26■□□□□ 0.51
HLA-DMA-201ENST00000374843 ZNF280DQ6N043 979 aa18.26■□□□□ 0.51
HLA-DMA-201ENST00000374843 FAM171BQ6P995 826 aa18.26■□□□□ 0.51
HLA-DMA-201ENST00000374843 TTC30AQ86WT1 665 aa18.26■□□□□ 0.51
HLA-DMA-201ENST00000374843 FUKQ8N0W3 1084 aa18.26■□□□□ 0.51
HLA-DMA-201ENST00000374843 THEM5Q8N1Q8 247 aa18.26■□□□□ 0.51
HLA-DMA-201ENST00000374843 FIBCD1Q8N539 461 aa18.26■□□□□ 0.51
HLA-DMA-201ENST00000374843 C1orf131Q8NDD1 294 aaKnown RBP18.26■□□□□ 0.51
HLA-DMA-201ENST00000374843 MYCBPAPQ8TBZ2 947 aa18.26■□□□□ 0.51
HLA-DMA-201ENST00000374843 ATRIPQ8WXE1 791 aa18.26■□□□□ 0.51
HLA-DMA-201ENST00000374843 TRIM11Q96F44 468 aa18.26■□□□□ 0.51
HLA-DMA-201ENST00000374843 VCPIP1Q96JH7 1222 aa18.26■□□□□ 0.51
HLA-DMA-201ENST00000374843 HERC2P3Q9BVR0 1158 aa18.26■□□□□ 0.51
HLA-DMA-201ENST00000374843 FAM49BQ9NUQ9 324 aa18.26■□□□□ 0.51
HLA-DMA-201ENST00000374843 SPG21Q9NZD8 308 aa18.26■□□□□ 0.51
HLA-DMA-201ENST00000374843 STK39Q9UEW8 545 aa18.26■□□□□ 0.51
HLA-DMA-201ENST00000374843 A0A0A6YYK5 440 aaPredicted RBP18.25■□□□□ 0.51
HLA-DMA-201ENST00000374843 OR6C75A6NL08 312 aa18.25■□□□□ 0.51
HLA-DMA-201ENST00000374843 NT5C1B-RDH14C9J2C7 533 aa18.25■□□□□ 0.51
HLA-DMA-201ENST00000374843 ATP2C2O75185 946 aa18.25■□□□□ 0.51
HLA-DMA-201ENST00000374843 FTLP02792 175 aaPredicted RBP18.25■□□□□ 0.51
HLA-DMA-201ENST00000374843 CCDC130P13994 396 aa18.25■□□□□ 0.51
HLA-DMA-201ENST00000374843 MMP8P22894 467 aa18.25■□□□□ 0.51
HLA-DMA-201ENST00000374843 GPD2P43304 727 aa18.25■□□□□ 0.51
HLA-DMA-201ENST00000374843 BCAT1P54687 386 aa18.25■□□□□ 0.51
HLA-DMA-201ENST00000374843 GALCP54803 685 aa18.25■□□□□ 0.51
HLA-DMA-201ENST00000374843 TSPY1Q01534 308 aa18.25■□□□□ 0.51
HLA-DMA-201ENST00000374843 C1QBPQ07021 282 aaKnown RBP18.25■□□□□ 0.51
HLA-DMA-201ENST00000374843 KIF5AQ12840 1032 aa18.25■□□□□ 0.51
HLA-DMA-201ENST00000374843 PTP4A2Q12974 167 aa18.25■□□□□ 0.51
HLA-DMA-201ENST00000374843 MDH1BQ5I0G3 518 aa18.25■□□□□ 0.51
HLA-DMA-201ENST00000374843 C9orf50Q5SZB4 431 aa18.25■□□□□ 0.51
HLA-DMA-201ENST00000374843 SPOUT1Q5T280 376 aaKnown RBP18.25■□□□□ 0.51
HLA-DMA-201ENST00000374843 GPR65Q8IYL9 337 aa18.25■□□□□ 0.51
HLA-DMA-201ENST00000374843 WDTC1Q8N5D0 677 aa18.25■□□□□ 0.51
HLA-DMA-201ENST00000374843 ANKRD52Q8NB46 1076 aa18.25■□□□□ 0.51
HLA-DMA-201ENST00000374843 ZBED2Q9BTP6 218 aa18.25■□□□□ 0.51
HLA-DMA-201ENST00000374843 TTPALQ9BTX7 342 aa18.25■□□□□ 0.51
HLA-DMA-201ENST00000374843 ZCWPW1Q9H0M4 648 aa18.25■□□□□ 0.51
HLA-DMA-201ENST00000374843 CHST7Q9NS84 486 aa18.25■□□□□ 0.51
HLA-DMA-201ENST00000374843 GTF3C4Q9UKN8 822 aa18.25■□□□□ 0.51
HLA-DMA-201ENST00000374843 MYBPHLA2RUH7 354 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms