RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 ERO1AQ96HE7 468 aa8.34□□□□□ -1.07
USP48-203ENST00000374732 PHOX2BQ99453 314 aa8.34□□□□□ -1.07
USP48-203ENST00000374732 PACSIN1Q9BY11 444 aa8.34□□□□□ -1.07
USP48-203ENST00000374732 PDE11AQ9HCR9 933 aa8.34□□□□□ -1.07
USP48-203ENST00000374732 INTS10Q9NVR2 710 aaKnown RBP8.34□□□□□ -1.07
USP48-203ENST00000374732 E2F8A0AVK6 867 aa8.34□□□□□ -1.07
USP48-203ENST00000374732 TK2O00142 265 aa8.34□□□□□ -1.07
USP48-203ENST00000374732 RIMBP2O15034 1052 aa8.34□□□□□ -1.07
USP48-203ENST00000374732 SRGAP2O75044 1071 aa8.34□□□□□ -1.07
USP48-203ENST00000374732 CRYZL1O95825 349 aa8.34□□□□□ -1.07
USP48-203ENST00000374732 IFNA14P01570 189 aa8.34□□□□□ -1.07
USP48-203ENST00000374732 CPB1P15086 417 aa8.34□□□□□ -1.07
USP48-203ENST00000374732 SSTR3P32745 418 aaPredicted RBP8.34□□□□□ -1.07
USP48-203ENST00000374732 KCNJ5P48544 419 aa8.34□□□□□ -1.07
USP48-203ENST00000374732 CAP1Q01518 475 aa8.34□□□□□ -1.07
USP48-203ENST00000374732 KCNAB2Q13303 367 aa8.34□□□□□ -1.07
USP48-203ENST00000374732 CYP27C1Q4G0S4 372 aa8.34□□□□□ -1.07
USP48-203ENST00000374732 SGO1Q5FBB7 561 aa8.34□□□□□ -1.07
USP48-203ENST00000374732 XKR9Q5GH70 373 aa8.34□□□□□ -1.07
USP48-203ENST00000374732 XKR3Q5GH77 459 aa8.34□□□□□ -1.07
USP48-203ENST00000374732 ATL3Q6DD88 541 aa8.34□□□□□ -1.07
USP48-203ENST00000374732 C8orf74Q6P047 294 aa8.34□□□□□ -1.07
USP48-203ENST00000374732 ZNF530Q6P9A1 599 aaPredicted RBP8.34□□□□□ -1.07
USP48-203ENST00000374732 IYDQ6PHW0 289 aa8.34□□□□□ -1.07
USP48-203ENST00000374732 SULF1Q8IWU6 871 aa8.34□□□□□ -1.07
USP48-203ENST00000374732 GRK7Q8WTQ7 553 aa8.34□□□□□ -1.07
USP48-203ENST00000374732 NSMCE1Q8WV22 266 aa8.34□□□□□ -1.07
USP48-203ENST00000374732 ASZ1Q8WWH4 475 aa8.34□□□□□ -1.07
USP48-203ENST00000374732 RMDN1Q96DB5 314 aa8.34□□□□□ -1.07
USP48-203ENST00000374732 USB1Q9BQ65 265 aaKnown RBP8.34□□□□□ -1.07
USP48-203ENST00000374732 WACQ9BTA9 647 aa8.34□□□□□ -1.07
USP48-203ENST00000374732 NAA15Q9BXJ9 866 aaKnown RBP8.34□□□□□ -1.07
USP48-203ENST00000374732 TRPC7Q9HCX4 862 aa8.34□□□□□ -1.07
USP48-203ENST00000374732 FBXO40Q9UH90 709 aa8.34□□□□□ -1.07
USP48-203ENST00000374732 HCN4Q9Y3Q4 1203 aa8.34□□□□□ -1.07
USP48-203ENST00000374732 CHD4Q14839 1912 aa8.34□□□□□ -1.07
USP48-203ENST00000374732 PNMA6FA0A0J9YX94 578 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 ZSCAN5BA6NJL1 495 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 ALG1L2C9J202 215 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 FZD6O60353 706 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 ALBP02768 609 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 C2orf54Q08AI8 447 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 TEFQ10587 303 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 C1orf141Q5JVX7 400 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 HDAC2Q92769 488 aaKnown RBP8.33□□□□□ -1.08
USP48-203ENST00000374732 XAGE2Q96GT9 111 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 ART5Q96L15 291 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 HGH1Q9BTY7 390 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 ISCA1Q9BUE6 129 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 TUFT1Q9NNX1 390 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 ZSWIM5Q9P217 1185 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 RABGEF1Q9UJ41 708 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 GIT1Q9Y2X7 761 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 PDPK1O15530 556 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 IRAK2O43187 625 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 PEX1O43933 1283 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 CLPTM1O96005 669 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 ITGB1P05556 798 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 MAPK3P27361 379 aaPredicted RBP8.33□□□□□ -1.08
USP48-203ENST00000374732 GDI2P50395 445 aaKnown RBP8.33□□□□□ -1.08
USP48-203ENST00000374732 ZNF280AP59817 542 aaPredicted RBP8.33□□□□□ -1.08
USP48-203ENST00000374732 BLMHQ13867 455 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 ALG1LQ6GMV1 187 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 SLC30A6Q6NXT4 461 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 SEZ6L2Q6UXD5 910 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 CYP4V2Q6ZWL3 525 aaPredicted RBP8.33□□□□□ -1.08
USP48-203ENST00000374732 ZNF365Q70YC5 407 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 RHOUQ7L0Q8 258 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 RIC3Q7Z5B4 369 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 VPS37DQ86XT2 251 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 FAM186BQ8IYM0 893 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 RGL4Q8IZJ4 473 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 ZNF579Q8NAF0 562 aaKnown RBP8.33□□□□□ -1.08
USP48-203ENST00000374732 AVL9Q8NBF6 648 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 OR52K1Q8NGK4 314 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 HUS1BQ8NHY5 278 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 LRRC8CQ8TDW0 803 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 PPP1R13BQ96KQ4 1090 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 HMG20BQ9P0W2 317 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 L3MBTL1Q9Y468 752 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 STON1Q9Y6Q2 735 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 C10orf71Q711Q0 1435 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 SCN11AQ9UI33 1791 aa8.33□□□□□ -1.08
USP48-203ENST00000374732 A0A1B0GVC2 190 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 ANKRD34BA5PLL1 514 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 NUDT19A8MXV4 375 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 UBTFL1P0CB47 393 aaPredicted RBP8.32□□□□□ -1.08
USP48-203ENST00000374732 HDCP19113 662 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 PTPN9P43378 593 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 TMED10P49755 219 aaKnown RBP8.32□□□□□ -1.08
USP48-203ENST00000374732 PMS1P54277 932 aaKnown RBP8.32□□□□□ -1.08
USP48-203ENST00000374732 ALDH18A1P54886 795 aaKnown RBP8.32□□□□□ -1.08
USP48-203ENST00000374732 NLRP11P59045 1033 aaKnown RBP8.32□□□□□ -1.08
USP48-203ENST00000374732 DUSP4Q13115 394 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 RAB33AQ14088 237 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 PON2Q15165 354 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 EFHC1Q5JVL4 640 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 HEATR6Q6AI08 1181 aaKnown RBP8.32□□□□□ -1.08
USP48-203ENST00000374732 GPR139Q6DWJ6 353 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 CYP4F22Q6NT55 531 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms