RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 DOCK6Q96HP0 2047 aa12.11□□□□□ -0.47
HSPG2-202ENST00000374676 MTMR11A4FU01 709 aa12.11□□□□□ -0.47
HSPG2-202ENST00000374676 TEX33O43247 280 aa12.11□□□□□ -0.47
HSPG2-202ENST00000374676 ATP2C2O75185 946 aa12.11□□□□□ -0.47
HSPG2-202ENST00000374676 SEC24AO95486 1093 aa12.11□□□□□ -0.47
HSPG2-202ENST00000374676 SERPINC1P01008 464 aa12.11□□□□□ -0.47
HSPG2-202ENST00000374676 SPATA31D3P0C874 917 aa12.11□□□□□ -0.47
HSPG2-202ENST00000374676 CD58P19256 250 aa12.11□□□□□ -0.47
HSPG2-202ENST00000374676 TRIM21P19474 475 aaKnown RBP12.11□□□□□ -0.47
HSPG2-202ENST00000374676 RFX1P22670 979 aa12.11□□□□□ -0.47
HSPG2-202ENST00000374676 ELF1P32519 619 aa12.11□□□□□ -0.47
HSPG2-202ENST00000374676 MFAP3P55082 362 aa12.11□□□□□ -0.47
HSPG2-202ENST00000374676 RBM10P98175 930 aaKnown RBP12.11□□□□□ -0.47
HSPG2-202ENST00000374676 ADCY1Q08828 1119 aa12.11□□□□□ -0.47
HSPG2-202ENST00000374676 CFAP221Q4G0U5 840 aa12.11□□□□□ -0.47
HSPG2-202ENST00000374676 LIN9Q5TKA1 542 aa12.11□□□□□ -0.47
HSPG2-202ENST00000374676 KLHDC7AQ5VTJ3 777 aa12.11□□□□□ -0.47
HSPG2-202ENST00000374676 ANKRD54Q6NXT1 300 aa12.11□□□□□ -0.47
HSPG2-202ENST00000374676 C4orf50Q6ZRC1 276 aa12.11□□□□□ -0.47
HSPG2-202ENST00000374676 SPATA31D4Q6ZUB0 917 aa12.11□□□□□ -0.47
HSPG2-202ENST00000374676 CCDC149Q6ZUS6 474 aa12.11□□□□□ -0.47
HSPG2-202ENST00000374676 B3GALNT2Q8NCR0 500 aa12.11□□□□□ -0.47
HSPG2-202ENST00000374676 RNF214Q8ND24 703 aa12.11□□□□□ -0.47
HSPG2-202ENST00000374676 CMASQ8NFW8 434 aaPredicted RBP12.11□□□□□ -0.47
HSPG2-202ENST00000374676 KAT5Q92993 513 aa12.11□□□□□ -0.47
HSPG2-202ENST00000374676 FUBP3Q96I24 572 aaKnown RBP eCLIP12.11□□□□□ -0.47
HSPG2-202ENST00000374676 RHOBTB2Q9BYZ6 727 aa12.11□□□□□ -0.47
HSPG2-202ENST00000374676 ELOVL4Q9GZR5 314 aa12.11□□□□□ -0.47
HSPG2-202ENST00000374676 ABCB6Q9NP58 842 aa12.11□□□□□ -0.47
HSPG2-202ENST00000374676 MAN1C1Q9NR34 630 aa12.11□□□□□ -0.47
HSPG2-202ENST00000374676 TMLHEQ9NVH6 421 aa12.11□□□□□ -0.47
HSPG2-202ENST00000374676 CLEC1BQ9P126 229 aa12.11□□□□□ -0.47
HSPG2-202ENST00000374676 KIAA1257Q9ULG3 409 aa12.11□□□□□ -0.47
HSPG2-202ENST00000374676 CNTN6Q9UQ52 1028 aa12.11□□□□□ -0.47
HSPG2-202ENST00000374676 SIK3Q9Y2K2 1263 aa12.11□□□□□ -0.47
HSPG2-202ENST00000374676 PCDHB5Q9Y5E4 795 aa12.11□□□□□ -0.47
HSPG2-202ENST00000374676 SPTBN5Q9NRC6 3674 aaKnown RBP12.11□□□□□ -0.47
HSPG2-202ENST00000374676 NCOR1O75376 2440 aa12.1□□□□□ -0.47
HSPG2-202ENST00000374676 A0A1W2PQC6 194 aa12.1□□□□□ -0.47
HSPG2-202ENST00000374676 ZMYND10O75800 440 aa12.1□□□□□ -0.47
HSPG2-202ENST00000374676 POU2F2P09086 479 aa12.1□□□□□ -0.47
HSPG2-202ENST00000374676 HNRNPA1P09651 372 aaKnown RBP eCLIP12.1□□□□□ -0.47
HSPG2-202ENST00000374676 HOXA9P31269 272 aa12.1□□□□□ -0.47
HSPG2-202ENST00000374676 TUFMP49411 452 aaKnown RBP12.1□□□□□ -0.47
HSPG2-202ENST00000374676 RAD23BP54727 409 aa12.1□□□□□ -0.47
HSPG2-202ENST00000374676 UBASH3AP57075 661 aa12.1□□□□□ -0.47
HSPG2-202ENST00000374676 PSMC1P62191 440 aaKnown RBP12.1□□□□□ -0.47
HSPG2-202ENST00000374676 DLX2Q07687 328 aaPredicted RBP12.1□□□□□ -0.47
HSPG2-202ENST00000374676 DUSP4Q13115 394 aa12.1□□□□□ -0.47
HSPG2-202ENST00000374676 SYCP1Q15431 976 aa12.1□□□□□ -0.47
HSPG2-202ENST00000374676 SKIV2LQ15477 1246 aaKnown RBP12.1□□□□□ -0.47
HSPG2-202ENST00000374676 SYCE2Q6PIF2 218 aa12.1□□□□□ -0.47
HSPG2-202ENST00000374676 CYP26C1Q6V0L0 522 aa12.1□□□□□ -0.47
HSPG2-202ENST00000374676 ACOT1Q86TX2 421 aa12.1□□□□□ -0.47
HSPG2-202ENST00000374676 GAS2L3Q86XJ1 694 aa12.1□□□□□ -0.47
HSPG2-202ENST00000374676 SLC4A11Q8NBS3 891 aa12.1□□□□□ -0.47
HSPG2-202ENST00000374676 ATAD1Q8NBU5 361 aa12.1□□□□□ -0.47
HSPG2-202ENST00000374676 HLA-CQ95604 372 aa12.1□□□□□ -0.47
HSPG2-202ENST00000374676 TMEM176AQ96HP8 235 aa12.1□□□□□ -0.47
HSPG2-202ENST00000374676 MSLNLQ96KJ4 702 aa12.1□□□□□ -0.47
HSPG2-202ENST00000374676 TWNKQ96RR1 684 aa12.1□□□□□ -0.47
HSPG2-202ENST00000374676 LSM14BQ9BX40 385 aaKnown RBP12.1□□□□□ -0.47
HSPG2-202ENST00000374676 NAA15Q9BXJ9 866 aaKnown RBP12.1□□□□□ -0.47
HSPG2-202ENST00000374676 DPEP3Q9H4B8 488 aa12.1□□□□□ -0.47
HSPG2-202ENST00000374676 UBE2ZQ9H832 354 aaPredicted RBP12.1□□□□□ -0.47
HSPG2-202ENST00000374676 CYP4F11Q9HBI6 524 aa12.1□□□□□ -0.47
HSPG2-202ENST00000374676 ZDHHC7Q9NXF8 308 aa12.1□□□□□ -0.47
HSPG2-202ENST00000374676 HMGXB4Q9UGU5 601 aa12.1□□□□□ -0.47
HSPG2-202ENST00000374676 DNAJC12Q9UKB3 198 aa12.1□□□□□ -0.47
HSPG2-202ENST00000374676 PCDHB4Q9Y5E5 795 aa12.1□□□□□ -0.47
HSPG2-202ENST00000374676 TBX10O75333 385 aa12.09□□□□□ -0.47
HSPG2-202ENST00000374676 NOL4O94818 638 aa12.09□□□□□ -0.47
HSPG2-202ENST00000374676 C8AP07357 584 aa12.09□□□□□ -0.47
HSPG2-202ENST00000374676 PAEPP09466 180 aa12.09□□□□□ -0.47
HSPG2-202ENST00000374676 HAPLN1P10915 354 aaPredicted RBP12.09□□□□□ -0.47
HSPG2-202ENST00000374676 UCHL3P15374 230 aa12.09□□□□□ -0.47
HSPG2-202ENST00000374676 MAGEA11P43364 429 aa12.09□□□□□ -0.47
HSPG2-202ENST00000374676 ZNF132P52740 706 aa12.09□□□□□ -0.47
HSPG2-202ENST00000374676 APBA1Q02410 837 aa12.09□□□□□ -0.47
HSPG2-202ENST00000374676 MDH1BQ5I0G3 518 aa12.09□□□□□ -0.47
HSPG2-202ENST00000374676 PPM1LQ5SGD2 360 aa12.09□□□□□ -0.47
HSPG2-202ENST00000374676 IQCEQ6IPM2 695 aa12.09□□□□□ -0.47
HSPG2-202ENST00000374676 GJB7Q6PEY0 223 aa12.09□□□□□ -0.47
HSPG2-202ENST00000374676 TMEM270Q6UE05 265 aa12.09□□□□□ -0.47
HSPG2-202ENST00000374676 VSTM1Q6UX27 236 aa12.09□□□□□ -0.47
HSPG2-202ENST00000374676 SPATA2LQ8IUW3 424 aaPredicted RBP12.09□□□□□ -0.47
HSPG2-202ENST00000374676 SLC7A14Q8TBB6 771 aa12.09□□□□□ -0.47
HSPG2-202ENST00000374676 SHC3Q92529 594 aa12.09□□□□□ -0.47
HSPG2-202ENST00000374676 MYLPFQ96A32 169 aa12.09□□□□□ -0.47
HSPG2-202ENST00000374676 PCED1BQ96HM7 432 aa12.09□□□□□ -0.47
HSPG2-202ENST00000374676 PGLYRP2Q96PD5 576 aa12.09□□□□□ -0.47
HSPG2-202ENST00000374676 LPIN3Q9BQK8 851 aa12.09□□□□□ -0.47
HSPG2-202ENST00000374676 B3GNT5Q9BYG0 378 aa12.09□□□□□ -0.47
HSPG2-202ENST00000374676 STK33Q9BYT3 514 aa12.09□□□□□ -0.47
HSPG2-202ENST00000374676 PRKD2Q9BZL6 878 aa12.09□□□□□ -0.47
HSPG2-202ENST00000374676 RBSNQ9H1K0 784 aa12.09□□□□□ -0.47
HSPG2-202ENST00000374676 S1PR5Q9H228 398 aa12.09□□□□□ -0.47
HSPG2-202ENST00000374676 GANQ9H2C0 597 aa12.09□□□□□ -0.47
HSPG2-202ENST00000374676 CRISPLD1Q9H336 500 aa12.09□□□□□ -0.47
HSPG2-202ENST00000374676 SFXN1Q9H9B4 322 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms