RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 B3GALNT2Q8NCR0 500 aa16.24■□□□□ 0.19
PFDN6-202ENST00000374607 VN1R2Q8NFZ6 395 aa16.24■□□□□ 0.19
PFDN6-202ENST00000374607 SPPL2BQ8TCT7 592 aa16.24■□□□□ 0.19
PFDN6-202ENST00000374607 RTP3Q9BQQ7 232 aa16.24■□□□□ 0.19
PFDN6-202ENST00000374607 CISHQ9NSE2 258 aa16.24■□□□□ 0.19
PFDN6-202ENST00000374607 THEGQ9P2T0 379 aa16.24■□□□□ 0.19
PFDN6-202ENST00000374607 CD207Q9UJ71 328 aa16.24■□□□□ 0.19
PFDN6-202ENST00000374607 SLC27A5Q9Y2P5 690 aa16.24■□□□□ 0.19
PFDN6-202ENST00000374607 PCDHB4Q9Y5E5 795 aa16.24■□□□□ 0.19
PFDN6-202ENST00000374607 CUL9Q8IWT3 2517 aa16.24■□□□□ 0.19
PFDN6-202ENST00000374607 TSC2P49815 1807 aa16.24■□□□□ 0.19
PFDN6-202ENST00000374607 PRRC2BQ5JSZ5 2229 aaKnown RBP16.23■□□□□ 0.19
PFDN6-202ENST00000374607 CCDC195A0A1B0GUA6 201 aa16.23■□□□□ 0.19
PFDN6-202ENST00000374607 MTMR11A4FU01 709 aa16.23■□□□□ 0.19
PFDN6-202ENST00000374607 ATP2C2O75185 946 aa16.23■□□□□ 0.19
PFDN6-202ENST00000374607 TBX10O75333 385 aa16.23■□□□□ 0.19
PFDN6-202ENST00000374607 KRT5P13647 590 aa16.23■□□□□ 0.19
PFDN6-202ENST00000374607 PON1P27169 355 aa16.23■□□□□ 0.19
PFDN6-202ENST00000374607 USP8P40818 1118 aa16.23■□□□□ 0.19
PFDN6-202ENST00000374607 TUFMP49411 452 aaKnown RBP16.23■□□□□ 0.19
PFDN6-202ENST00000374607 PLCB2Q00722 1185 aa16.23■□□□□ 0.19
PFDN6-202ENST00000374607 DLX2Q07687 328 aaPredicted RBP16.23■□□□□ 0.19
PFDN6-202ENST00000374607 PLD1Q13393 1074 aa16.23■□□□□ 0.19
PFDN6-202ENST00000374607 ORC1Q13415 861 aa16.23■□□□□ 0.19
PFDN6-202ENST00000374607 TMC5Q6UXY8 1006 aa16.23■□□□□ 0.19
PFDN6-202ENST00000374607 RTL10Q7L3V2 364 aa16.23■□□□□ 0.19
PFDN6-202ENST00000374607 ENOSF1Q7L5Y1 443 aa16.23■□□□□ 0.19
PFDN6-202ENST00000374607 C12orf76Q8N812 135 aaPredicted RBP16.23■□□□□ 0.19
PFDN6-202ENST00000374607 ATAD1Q8NBU5 361 aa16.23■□□□□ 0.19
PFDN6-202ENST00000374607 HEXIM2Q96MH2 286 aaKnown RBP16.23■□□□□ 0.19
PFDN6-202ENST00000374607 ARID3AQ99856 593 aa16.23■□□□□ 0.19
PFDN6-202ENST00000374607 LSM14BQ9BX40 385 aaKnown RBP16.23■□□□□ 0.19
PFDN6-202ENST00000374607 DPEP3Q9H4B8 488 aa16.23■□□□□ 0.19
PFDN6-202ENST00000374607 FAM124BQ9H5Z6 455 aaPredicted RBP16.23■□□□□ 0.19
PFDN6-202ENST00000374607 ZDHHC7Q9NXF8 308 aa16.23■□□□□ 0.19
PFDN6-202ENST00000374607 APEX2Q9UBZ4 518 aa16.23■□□□□ 0.19
PFDN6-202ENST00000374607 FAM50BQ9Y247 325 aa16.23■□□□□ 0.19
PFDN6-202ENST00000374607 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.22■□□□□ 0.19
PFDN6-202ENST00000374607 MYBPHLA2RUH7 354 aa16.22■□□□□ 0.19
PFDN6-202ENST00000374607 LGALS16A8MUM7 142 aa16.22■□□□□ 0.19
PFDN6-202ENST00000374607 CCL16O15467 120 aa16.22■□□□□ 0.19
PFDN6-202ENST00000374607 RFPL2O75678 378 aa16.22■□□□□ 0.19
PFDN6-202ENST00000374607 ZMYND10O75800 440 aa16.22■□□□□ 0.19
PFDN6-202ENST00000374607 TPM3P06753 285 aa16.22■□□□□ 0.19
PFDN6-202ENST00000374607 EPHB3P54753 998 aa16.22■□□□□ 0.19
PFDN6-202ENST00000374607 GCNT1Q02742 428 aa16.22■□□□□ 0.19
PFDN6-202ENST00000374607 ITIH3Q06033 890 aa16.22■□□□□ 0.19
PFDN6-202ENST00000374607 INCA1Q0VD86 236 aa16.22■□□□□ 0.19
PFDN6-202ENST00000374607 KCNC3Q14003 757 aa16.22■□□□□ 0.19
PFDN6-202ENST00000374607 VEPH1Q14D04 833 aa16.22■□□□□ 0.19
PFDN6-202ENST00000374607 ARHGAP44Q17R89 818 aa16.22■□□□□ 0.19
PFDN6-202ENST00000374607 IQCEQ6IPM2 695 aa16.22■□□□□ 0.19
PFDN6-202ENST00000374607 TMEM270Q6UE05 265 aa16.22■□□□□ 0.19
PFDN6-202ENST00000374607 LRRTM3Q86VH5 581 aa16.22■□□□□ 0.19
PFDN6-202ENST00000374607 ARHGEF19Q8IW93 802 aa16.22■□□□□ 0.19
PFDN6-202ENST00000374607 TCEAL8Q8IYN2 117 aa16.22■□□□□ 0.19
PFDN6-202ENST00000374607 LMO3Q8TAP4 145 aa16.22■□□□□ 0.19
PFDN6-202ENST00000374607 MYCBPAPQ8TBZ2 947 aa16.22■□□□□ 0.19
PFDN6-202ENST00000374607 MYLPFQ96A32 169 aa16.22■□□□□ 0.19
PFDN6-202ENST00000374607 TMEM176AQ96HP8 235 aa16.22■□□□□ 0.19
PFDN6-202ENST00000374607 CLEC1BQ9P126 229 aa16.22■□□□□ 0.19
PFDN6-202ENST00000374607 PLXNA3P51805 1871 aa16.21■□□□□ 0.19
PFDN6-202ENST00000374607 LRRC10BA6NIK2 292 aa16.21■□□□□ 0.19
PFDN6-202ENST00000374607 CILPO75339 1184 aa16.21■□□□□ 0.19
PFDN6-202ENST00000374607 SEC24AO95486 1093 aa16.21■□□□□ 0.19
PFDN6-202ENST00000374607 HNRNPA1P09651 372 aaKnown RBP eCLIP16.21■□□□□ 0.19
PFDN6-202ENST00000374607 CD19P15391 556 aa16.21■□□□□ 0.19
PFDN6-202ENST00000374607 ANXA13P27216 316 aa16.21■□□□□ 0.19
PFDN6-202ENST00000374607 LTBRP36941 435 aa16.21■□□□□ 0.19
PFDN6-202ENST00000374607 GRIK1P39086 918 aa16.21■□□□□ 0.19
PFDN6-202ENST00000374607 UBASH3AP57075 661 aa16.21■□□□□ 0.19
PFDN6-202ENST00000374607 TWF1Q12792 350 aa16.21■□□□□ 0.19
PFDN6-202ENST00000374607 RAPGEF1Q13905 1077 aa16.21■□□□□ 0.19
PFDN6-202ENST00000374607 PUS10Q3MIT2 529 aaKnown RBP16.21■□□□□ 0.19
PFDN6-202ENST00000374607 ATAT1Q5SQI0 421 aa16.21■□□□□ 0.19
PFDN6-202ENST00000374607 PHLDB3Q6NSJ2 640 aa16.21■□□□□ 0.19
PFDN6-202ENST00000374607 SCN4BQ8IWT1 228 aa16.21■□□□□ 0.19
PFDN6-202ENST00000374607 NEK11Q8NG66 645 aa16.21■□□□□ 0.19
PFDN6-202ENST00000374607 SMG7Q92540 1137 aaKnown RBP16.21■□□□□ 0.19
PFDN6-202ENST00000374607 ZNF512Q96ME7 567 aaPredicted RBP16.21■□□□□ 0.19
PFDN6-202ENST00000374607 RIPOR3Q96MK2 946 aa16.21■□□□□ 0.19
PFDN6-202ENST00000374607 HSD3B7Q9H2F3 369 aa16.21■□□□□ 0.19
PFDN6-202ENST00000374607 CRTAC1Q9NQ79 661 aa16.21■□□□□ 0.19
PFDN6-202ENST00000374607 PRDM6Q9NQX0 595 aa16.21■□□□□ 0.19
PFDN6-202ENST00000374607 TMLHEQ9NVH6 421 aa16.21■□□□□ 0.19
PFDN6-202ENST00000374607 HMGXB4Q9UGU5 601 aa16.21■□□□□ 0.19
PFDN6-202ENST00000374607 DNAJC12Q9UKB3 198 aa16.21■□□□□ 0.19
PFDN6-202ENST00000374607 INSL5Q9Y5Q6 135 aa16.21■□□□□ 0.19
PFDN6-202ENST00000374607 PRUNE2Q8WUY3 3088 aa16.21■□□□□ 0.19
PFDN6-202ENST00000374607 TRANK1O15050 2925 aa16.21■□□□□ 0.18
PFDN6-202ENST00000374607 BDNFP23560 247 aa16.2■□□□□ 0.18
PFDN6-202ENST00000374607 CYP2F1P24903 491 aa16.2■□□□□ 0.18
PFDN6-202ENST00000374607 RPL10AP62906 217 aaKnown RBP16.2■□□□□ 0.18
PFDN6-202ENST00000374607 FANCCQ00597 558 aa16.2■□□□□ 0.18
PFDN6-202ENST00000374607 TFF2Q03403 129 aa16.2■□□□□ 0.18
PFDN6-202ENST00000374607 COL19A1Q14993 1142 aa16.2■□□□□ 0.18
PFDN6-202ENST00000374607 SYCP1Q15431 976 aa16.2■□□□□ 0.18
PFDN6-202ENST00000374607 FAM171BQ6P995 826 aa16.2■□□□□ 0.18
PFDN6-202ENST00000374607 JAKMIP2Q96AA8 810 aa16.2■□□□□ 0.18
PFDN6-202ENST00000374607 PCED1BQ96HM7 432 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms