RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 PRUNE1Q86TP1 453 aa18.89■□□□□ 0.61
PHF1-201ENST00000374512 SLC35B2Q8TB61 432 aa18.89■□□□□ 0.61
PHF1-201ENST00000374512 PRCCQ92733 491 aaPredicted RBP18.89■□□□□ 0.61
PHF1-201ENST00000374512 ALKBH8Q96BT7 664 aaKnown RBP18.89■□□□□ 0.61
PHF1-201ENST00000374512 FAM84AQ96KN4 292 aa18.89■□□□□ 0.61
PHF1-201ENST00000374512 DHX33Q9H6R0 707 aaKnown RBP18.89■□□□□ 0.61
PHF1-201ENST00000374512 SUFUQ9UMX1 484 aa18.89■□□□□ 0.61
PHF1-201ENST00000374512 ADGRA2Q96PE1 1338 aa18.89■□□□□ 0.61
PHF1-201ENST00000374512 EIF4BP23588 611 aaKnown RBP18.89■□□□□ 0.61
PHF1-201ENST00000374512 CDH5P33151 784 aaPredicted RBP18.89■□□□□ 0.61
PHF1-201ENST00000374512 RPA3P35244 121 aaPredicted RBP18.89■□□□□ 0.61
PHF1-201ENST00000374512 ARL2P36404 184 aa18.89■□□□□ 0.61
PHF1-201ENST00000374512 HIF1AQ16665 826 aa18.89■□□□□ 0.61
PHF1-201ENST00000374512 WDR72Q3MJ13 1102 aa18.89■□□□□ 0.61
PHF1-201ENST00000374512 ATP13A4Q4VNC1 1196 aa18.89■□□□□ 0.61
PHF1-201ENST00000374512 SLC45A4Q5BKX6 768 aa18.89■□□□□ 0.61
PHF1-201ENST00000374512 PPP1R15BQ5SWA1 713 aa18.89■□□□□ 0.61
PHF1-201ENST00000374512 CATSPERGQ6ZRH7 1159 aa18.89■□□□□ 0.61
PHF1-201ENST00000374512 SH3TC2Q8TF17 1288 aa18.89■□□□□ 0.61
PHF1-201ENST00000374512 HAPLN2Q9GZV7 340 aa18.89■□□□□ 0.61
PHF1-201ENST00000374512 ZNF302Q9NR11 478 aa18.89■□□□□ 0.61
PHF1-201ENST00000374512 TRIM33Q9UPN9 1127 aa18.89■□□□□ 0.61
PHF1-201ENST00000374512 FARP1Q9Y4F1 1045 aaPredicted RBP18.89■□□□□ 0.61
PHF1-201ENST00000374512 ASS1P00966 412 aaKnown RBP18.88■□□□□ 0.61
PHF1-201ENST00000374512 ZSCAN5DPP0CG00 497 aa18.88■□□□□ 0.61
PHF1-201ENST00000374512 ZNF252P-AS1Q0IIN9 211 aa18.88■□□□□ 0.61
PHF1-201ENST00000374512 PDIA2Q13087 525 aaKnown RBP18.88■□□□□ 0.61
PHF1-201ENST00000374512 FYB2Q5VWT5 728 aa18.88■□□□□ 0.61
PHF1-201ENST00000374512 PPIL6Q8IXY8 311 aa18.88■□□□□ 0.61
PHF1-201ENST00000374512 ATP11CQ8NB49 1132 aa18.88■□□□□ 0.61
PHF1-201ENST00000374512 TMEM143Q96AN5 459 aa18.88■□□□□ 0.61
PHF1-201ENST00000374512 THOC1Q96FV9 657 aaKnown RBP18.88■□□□□ 0.61
PHF1-201ENST00000374512 SAR1AQ9NR31 198 aa18.88■□□□□ 0.61
PHF1-201ENST00000374512 STRIP2Q9ULQ0 834 aa18.88■□□□□ 0.61
PHF1-201ENST00000374512 MAFBQ9Y5Q3 323 aaPredicted RBP18.88■□□□□ 0.61
PHF1-201ENST00000374512 DIAPH2O60879 1101 aa18.88■□□□□ 0.61
PHF1-201ENST00000374512 OATP04181 439 aa18.88■□□□□ 0.61
PHF1-201ENST00000374512 GLRA2P23416 452 aa18.88■□□□□ 0.61
PHF1-201ENST00000374512 ARL4CP56559 192 aa18.88■□□□□ 0.61
PHF1-201ENST00000374512 RNASELQ05823 741 aaKnown RBP18.88■□□□□ 0.61
PHF1-201ENST00000374512 FASTKD3Q14CZ7 662 aaKnown RBP18.88■□□□□ 0.61
PHF1-201ENST00000374512 KLHL38Q2WGJ6 581 aa18.88■□□□□ 0.61
PHF1-201ENST00000374512 PRAMEF18Q5VWM3 479 aa18.88■□□□□ 0.61
PHF1-201ENST00000374512 CFAP61Q8NHU2 1237 aa18.88■□□□□ 0.61
PHF1-201ENST00000374512 C10orf82Q8WW14 230 aa18.88■□□□□ 0.61
PHF1-201ENST00000374512 MCEEQ96PE7 176 aa18.88■□□□□ 0.61
PHF1-201ENST00000374512 CYLDQ9NQC7 956 aa18.88■□□□□ 0.61
PHF1-201ENST00000374512 KLHL11Q9NVR0 708 aa18.88■□□□□ 0.61
PHF1-201ENST00000374512 SLC5A4Q9NY91 659 aa18.88■□□□□ 0.61
PHF1-201ENST00000374512 PCDHGC3Q9UN70 934 aa18.88■□□□□ 0.61
PHF1-201ENST00000374512 SNCAIPQ9Y6H5 919 aa18.88■□□□□ 0.61
PHF1-201ENST00000374512 LCTP09848 1927 aa18.87■□□□□ 0.61
PHF1-201ENST00000374512 LRRIQ4A6NIV6 560 aa18.87■□□□□ 0.61
PHF1-201ENST00000374512 A8MUI8 341 aa18.87■□□□□ 0.61
PHF1-201ENST00000374512 F8VP50 259 aa18.87■□□□□ 0.61
PHF1-201ENST00000374512 SGK1O00141 431 aa18.87■□□□□ 0.61
PHF1-201ENST00000374512 C2CD2LO14523 706 aa18.87■□□□□ 0.61
PHF1-201ENST00000374512 LIN7AO14910 233 aaPredicted RBP18.87■□□□□ 0.61
PHF1-201ENST00000374512 TM9SF1O15321 606 aa18.87■□□□□ 0.61
PHF1-201ENST00000374512 ATG7O95352 703 aa18.87■□□□□ 0.61
PHF1-201ENST00000374512 ATP4AP20648 1035 aa18.87■□□□□ 0.61
PHF1-201ENST00000374512 SP2Q02086 613 aa18.87■□□□□ 0.61
PHF1-201ENST00000374512 NAA25Q14CX7 972 aa18.87■□□□□ 0.61
PHF1-201ENST00000374512 STXBP2Q15833 593 aa18.87■□□□□ 0.61
PHF1-201ENST00000374512 ERICH1Q86X53 443 aa18.87■□□□□ 0.61
PHF1-201ENST00000374512 WDR49Q8IV35 697 aa18.87■□□□□ 0.61
PHF1-201ENST00000374512 ASAP3Q8TDY4 903 aa18.87■□□□□ 0.61
PHF1-201ENST00000374512 SLC7A3Q8WY07 619 aa18.87■□□□□ 0.61
PHF1-201ENST00000374512 UTP4Q969X6 686 aaKnown RBP18.87■□□□□ 0.61
PHF1-201ENST00000374512 CEP83Q9Y592 693 aa18.87■□□□□ 0.61
PHF1-201ENST00000374512 LUC7L3O95232 432 aaKnown RBP18.86■□□□□ 0.61
PHF1-201ENST00000374512 KRT7P08729 469 aa18.86■□□□□ 0.61
PHF1-201ENST00000374512 ICAM3P32942 547 aa18.86■□□□□ 0.61
PHF1-201ENST00000374512 PLCB3Q01970 1234 aa18.86■□□□□ 0.61
PHF1-201ENST00000374512 ADGRD1Q6QNK2 874 aa18.86■□□□□ 0.61
PHF1-201ENST00000374512 ZPBP2Q6X784 338 aa18.86■□□□□ 0.61
PHF1-201ENST00000374512 CCDC125Q86Z20 511 aa18.86■□□□□ 0.61
PHF1-201ENST00000374512 BRSK2Q8IWQ3 736 aa18.86■□□□□ 0.61
PHF1-201ENST00000374512 C4orf33Q8N1A6 199 aa18.86■□□□□ 0.61
PHF1-201ENST00000374512 OR5B17Q8NGF7 314 aa18.86■□□□□ 0.61
PHF1-201ENST00000374512 ZNF75CPQ92670 426 aaPredicted RBP18.86■□□□□ 0.61
PHF1-201ENST00000374512 KLRG1Q96E93 195 aa18.86■□□□□ 0.61
PHF1-201ENST00000374512 DHRS4Q9BTZ2 278 aa18.86■□□□□ 0.61
PHF1-201ENST00000374512 TUBB6Q9BUF5 446 aa18.86■□□□□ 0.61
PHF1-201ENST00000374512 NIFKQ9BYG3 293 aaKnown RBP18.86■□□□□ 0.61
PHF1-201ENST00000374512 HOXC10Q9NYD6 342 aa18.86■□□□□ 0.61
PHF1-201ENST00000374512 RABGEF1Q9UJ41 708 aa18.86■□□□□ 0.61
PHF1-201ENST00000374512 ZMYND8Q9ULU4 1186 aaPredicted RBP18.86■□□□□ 0.61
PHF1-201ENST00000374512 LRRD1A4D1F6 860 aa18.86■□□□□ 0.61
PHF1-201ENST00000374512 ETS1P14921 441 aa18.86■□□□□ 0.61
PHF1-201ENST00000374512 TCF4P15884 667 aa18.86■□□□□ 0.61
PHF1-201ENST00000374512 RFC5P40937 340 aa18.86■□□□□ 0.61
PHF1-201ENST00000374512 SLC1A5Q15758 541 aa18.86■□□□□ 0.61
PHF1-201ENST00000374512 WASHC2DQ5SRD0 308 aa18.86■□□□□ 0.61
PHF1-201ENST00000374512 PYROXD1Q8WU10 500 aa18.86■□□□□ 0.61
PHF1-201ENST00000374512 ZBTB45Q96K62 511 aaPredicted RBP18.86■□□□□ 0.61
PHF1-201ENST00000374512 TARS2Q9BW92 718 aaKnown RBP18.86■□□□□ 0.61
PHF1-201ENST00000374512 VPS11Q9H270 941 aa18.86■□□□□ 0.61
PHF1-201ENST00000374512 ACSS3Q9H6R3 686 aa18.86■□□□□ 0.61
PHF1-201ENST00000374512 SLCO1B3Q9NPD5 702 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms