RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.65■□□□□ 0.26
NIPAL3-204ENST00000374399 ALG6Q9Y672 507 aa16.65■□□□□ 0.26
NIPAL3-204ENST00000374399 A8MXQ7 604 aa16.64■□□□□ 0.25
NIPAL3-204ENST00000374399 M0QYV0 167 aa16.64■□□□□ 0.25
NIPAL3-204ENST00000374399 DDX3YO15523 660 aaKnown RBP16.64■□□□□ 0.25
NIPAL3-204ENST00000374399 HUS1O60921 280 aa16.64■□□□□ 0.25
NIPAL3-204ENST00000374399 ITGB1P05556 798 aa16.64■□□□□ 0.25
NIPAL3-204ENST00000374399 PDGFRBP09619 1106 aa16.64■□□□□ 0.25
NIPAL3-204ENST00000374399 FAM163BP0C2L3 166 aa16.64■□□□□ 0.25
NIPAL3-204ENST00000374399 CTCFP49711 727 aaPredicted RBP16.64■□□□□ 0.25
NIPAL3-204ENST00000374399 LRRC26Q2I0M4 334 aa16.64■□□□□ 0.25
NIPAL3-204ENST00000374399 PPP1R15BQ5SWA1 713 aa16.64■□□□□ 0.25
NIPAL3-204ENST00000374399 ARHGAP17Q68EM7 881 aa16.64■□□□□ 0.25
NIPAL3-204ENST00000374399 PPP1R2P3Q6NXS1 205 aa16.64■□□□□ 0.25
NIPAL3-204ENST00000374399 PEX26Q7Z412 305 aa16.64■□□□□ 0.25
NIPAL3-204ENST00000374399 SEPT8Q92599 483 aa16.64■□□□□ 0.25
NIPAL3-204ENST00000374399 CD101Q93033 1021 aa16.64■□□□□ 0.25
NIPAL3-204ENST00000374399 CAPZA3Q96KX2 299 aa16.64■□□□□ 0.25
NIPAL3-204ENST00000374399 CALR3Q96L12 384 aaKnown RBP16.64■□□□□ 0.25
NIPAL3-204ENST00000374399 CPXM1Q96SM3 734 aa16.64■□□□□ 0.25
NIPAL3-204ENST00000374399 ELAC1Q9H777 363 aaKnown RBP16.64■□□□□ 0.25
NIPAL3-204ENST00000374399 FAM49BQ9NUQ9 324 aa16.64■□□□□ 0.25
NIPAL3-204ENST00000374399 EHD2Q9NZN4 543 aa16.64■□□□□ 0.25
NIPAL3-204ENST00000374399 TULP2O00295 520 aa16.63■□□□□ 0.25
NIPAL3-204ENST00000374399 ATP2C2O75185 946 aa16.63■□□□□ 0.25
NIPAL3-204ENST00000374399 GABBR2O75899 941 aa16.63■□□□□ 0.25
NIPAL3-204ENST00000374399 TCP1P17987 556 aaKnown RBP16.63■□□□□ 0.25
NIPAL3-204ENST00000374399 MESDQ14696 234 aa16.63■□□□□ 0.25
NIPAL3-204ENST00000374399 RPS6KA1Q15418 735 aa16.63■□□□□ 0.25
NIPAL3-204ENST00000374399 GOLGA7BQ2TAP0 167 aa16.63■□□□□ 0.25
NIPAL3-204ENST00000374399 CYP4A22Q5TCH4 519 aa16.63■□□□□ 0.25
NIPAL3-204ENST00000374399 GLB1LQ6UWU2 654 aa16.63■□□□□ 0.25
NIPAL3-204ENST00000374399 RSRC2Q7L4I2 434 aaKnown RBP16.63■□□□□ 0.25
NIPAL3-204ENST00000374399 ERICH1Q86X53 443 aa16.63■□□□□ 0.25
NIPAL3-204ENST00000374399 APBB2Q92870 758 aa16.63■□□□□ 0.25
NIPAL3-204ENST00000374399 TBC1D13Q9NVG8 400 aa16.63■□□□□ 0.25
NIPAL3-204ENST00000374399 SMARCAL1Q9NZC9 954 aa16.63■□□□□ 0.25
NIPAL3-204ENST00000374399 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.63■□□□□ 0.25
NIPAL3-204ENST00000374399 ATP11BQ9Y2G3 1177 aa16.63■□□□□ 0.25
NIPAL3-204ENST00000374399 V9GYY5 206 aaPredicted RBP16.63■□□□□ 0.25
NIPAL3-204ENST00000374399 I3L4J1 428 aa16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 ERBB2P04626 1255 aa16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 COMTP21964 271 aa16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 ITGB8P26012 769 aa16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 BRCC3P46736 316 aa16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 GABRB2P47870 512 aa16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 GATMP50440 423 aa16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 DNA2P51530 1060 aa16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 PDCLQ13371 301 aa16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 PAN2Q504Q3 1202 aaKnown RBP16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 NOMO2Q5JPE7 1267 aa16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 LIN9Q5TKA1 542 aa16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 DCAF12L1Q5VU92 463 aa16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 COLGALT2Q8IYK4 626 aa16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 DDX27Q96GQ7 796 aaKnown RBP16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 MS4A14Q96JA4 679 aa16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 RTP3Q9BQQ7 232 aa16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 SNX25Q9H3E2 840 aa16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 C11orf49Q9H6J7 331 aa16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 AMFRQ9UKV5 643 aa16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 TIMM13Q9Y5L4 95 aaPredicted RBP16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 FNDC1Q4ZHG4 1894 aaPredicted RBP16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 TMEM110-MUSTN1A8MSY1 372 aa16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 M0QZQ0 153 aa16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 CALB1P05937 261 aa16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 CCDC130P13994 396 aa16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 TKTP29401 623 aaKnown RBP16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 GSCP56915 257 aaPredicted RBP16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 RPL7AP62424 266 aaKnown RBP16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 ZNF252P-AS1Q0IIN9 211 aa16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 PAQR9Q6ZVX9 377 aa16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 ZNF572Q7Z3I7 529 aaPredicted RBP16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 UROC1Q96N76 676 aa16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 CASD1Q96PB1 797 aa16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 ANAPC7Q9UJX3 599 aa16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 CEP83Q9Y592 693 aa16.62■□□□□ 0.25
NIPAL3-204ENST00000374399 COL4A6Q14031 1691 aa16.61■□□□□ 0.25
NIPAL3-204ENST00000374399 TMEM191CA6NGB0 347 aa16.61■□□□□ 0.25
NIPAL3-204ENST00000374399 B3GAT3O94766 335 aa16.61■□□□□ 0.25
NIPAL3-204ENST00000374399 ACAT1P24752 427 aaKnown RBP16.61■□□□□ 0.25
NIPAL3-204ENST00000374399 MARCKSL1P49006 195 aa16.61■□□□□ 0.25
NIPAL3-204ENST00000374399 PSMC1P62191 440 aaKnown RBP16.61■□□□□ 0.25
NIPAL3-204ENST00000374399 STILQ15468 1287 aa16.61■□□□□ 0.25
NIPAL3-204ENST00000374399 PMF1Q6P1K2 205 aa16.61■□□□□ 0.25
NIPAL3-204ENST00000374399 DCLRE1AQ6PJP8 1040 aa16.61■□□□□ 0.25
NIPAL3-204ENST00000374399 XYLT1Q86Y38 959 aa16.61■□□□□ 0.25
NIPAL3-204ENST00000374399 CEP112Q8N8E3 955 aa16.61■□□□□ 0.25
NIPAL3-204ENST00000374399 C3orf20Q8ND61 904 aa16.61■□□□□ 0.25
NIPAL3-204ENST00000374399 HASPINQ8TF76 798 aa16.61■□□□□ 0.25
NIPAL3-204ENST00000374399 SLC35F5Q8WV83 523 aa16.61■□□□□ 0.25
NIPAL3-204ENST00000374399 ALG3Q92685 438 aa16.61■□□□□ 0.25
NIPAL3-204ENST00000374399 KRT35Q92764 455 aa16.61■□□□□ 0.25
NIPAL3-204ENST00000374399 CRTAC1Q9NQ79 661 aa16.61■□□□□ 0.25
NIPAL3-204ENST00000374399 PARVAQ9NVD7 372 aa16.61■□□□□ 0.25
NIPAL3-204ENST00000374399 PCDH10Q9P2E7 1040 aa16.61■□□□□ 0.25
NIPAL3-204ENST00000374399 DNAJB4Q9UDY4 337 aa16.61■□□□□ 0.25
NIPAL3-204ENST00000374399 LTBP2Q14767 1821 aa16.61■□□□□ 0.25
NIPAL3-204ENST00000374399 EFCAB8A8MWE9 144 aa16.6■□□□□ 0.25
NIPAL3-204ENST00000374399 CYP11A1P05108 521 aa16.6■□□□□ 0.25
NIPAL3-204ENST00000374399 CLTBP09497 229 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms