RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 SLC37A4O43826 429 aa14.93□□□□□ -0.02
TRAF1-201ENST00000373887 PDGFRAP16234 1089 aa14.93□□□□□ -0.02
TRAF1-201ENST00000373887 TMED10P49755 219 aaKnown RBP14.93□□□□□ -0.02
TRAF1-201ENST00000373887 HSD17B4P51659 736 aa14.93□□□□□ -0.02
TRAF1-201ENST00000373887 CYP4A22Q5TCH4 519 aa14.93□□□□□ -0.02
TRAF1-201ENST00000373887 MEI1Q5TIA1 1274 aa14.93□□□□□ -0.02
TRAF1-201ENST00000373887 CENPPQ6IPU0 288 aa14.93□□□□□ -0.02
TRAF1-201ENST00000373887 APOL5Q9BWW9 433 aa14.93□□□□□ -0.02
TRAF1-201ENST00000373887 DLGAP3O95886 979 aa14.93□□□□□ -0.02
TRAF1-201ENST00000373887 APRTP07741 180 aa14.93□□□□□ -0.02
TRAF1-201ENST00000373887 NCALDP61601 193 aa14.93□□□□□ -0.02
TRAF1-201ENST00000373887 HES6Q96HZ4 224 aa14.93□□□□□ -0.02
TRAF1-201ENST00000373887 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.93□□□□□ -0.02
TRAF1-201ENST00000373887 XPO7Q9UIA9 1087 aaKnown RBP14.93□□□□□ -0.02
TRAF1-201ENST00000373887 CDYLQ9Y232 598 aa14.93□□□□□ -0.02
TRAF1-201ENST00000373887 M0R3G1 203 aa14.93□□□□□ -0.02
TRAF1-201ENST00000373887 CCDC103Q8IW40 242 aa14.93□□□□□ -0.02
TRAF1-201ENST00000373887 SH2D3CQ8N5H7 860 aa14.93□□□□□ -0.02
TRAF1-201ENST00000373887 GRAMD1AQ96CP6 724 aa14.93□□□□□ -0.02
TRAF1-201ENST00000373887 CALR3Q96L12 384 aaKnown RBP14.93□□□□□ -0.02
TRAF1-201ENST00000373887 PRPF18Q99633 342 aaKnown RBP14.93□□□□□ -0.02
TRAF1-201ENST00000373887 LATS2Q9NRM7 1088 aa14.93□□□□□ -0.02
TRAF1-201ENST00000373887 NCOA3Q9Y6Q9 1424 aa14.93□□□□□ -0.02
TRAF1-201ENST00000373887 LOC102724159A0A0B4J2E5 919 aa14.93□□□□□ -0.02
TRAF1-201ENST00000373887 PDXKO00764 312 aa14.93□□□□□ -0.02
TRAF1-201ENST00000373887 PWP2Q15269 919 aaKnown RBP14.93□□□□□ -0.02
TRAF1-201ENST00000373887 CD4P01730 458 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 LY6KQ17RY6 165 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 DCAF6Q58WW2 860 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 STKLD1Q8NE28 680 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 FOPNLQ96NB1 174 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 SLC38A7Q9NVC3 462 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 PNMA8BQ9ULN7 279 aaPredicted RBP14.92□□□□□ -0.02
TRAF1-201ENST00000373887 ALDH6A1Q02252 535 aaKnown RBP14.92□□□□□ -0.02
TRAF1-201ENST00000373887 STX3Q13277 289 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 C16orf89Q6UX73 402 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 ZNF473Q8WTR7 871 aaKnown RBP14.92□□□□□ -0.02
TRAF1-201ENST00000373887 ANKRD49Q8WVL7 239 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 PTPRN2Q92932 1015 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 CYFIP2Q96F07 1278 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 RNPC3Q96LT9 517 aaKnown RBP14.92□□□□□ -0.02
TRAF1-201ENST00000373887 RNF103O00237 685 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 MTM1Q13496 603 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 MAPRE1Q15691 268 aaKnown RBP14.92□□□□□ -0.02
TRAF1-201ENST00000373887 SGSM1Q2NKQ1 1148 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 SMTNL2Q2TAL5 461 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 C1orf131Q8NDD1 294 aaKnown RBP14.92□□□□□ -0.02
TRAF1-201ENST00000373887 MTERF3Q96E29 417 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 CCT7Q99832 543 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 OLFML3Q9NRN5 406 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 ARL2BPQ9Y2Y0 163 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 POLR1AO95602 1720 aaPredicted RBP14.92□□□□□ -0.02
TRAF1-201ENST00000373887 PHF20L1A8MW92 1017 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 MSH4O15457 936 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 TOMM70O94826 608 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 MYL2P10916 166 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 GRK2P25098 689 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 SERPINB3P29508 390 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 PLA2G4AP47712 749 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 DEFA1P59665 94 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 DEFA3P59666 94 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 TWF1Q12792 350 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 ALFQ53S48 1182 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 KIF2BQ8N4N8 673 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 GTF2A1LQ9UNN4 478 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 CAND2O75155 1236 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 NDUFS3O75489 264 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 HLA-DRAP01903 254 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 GJB7Q6PEY0 223 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 USP49Q70CQ1 688 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 ADGRA1Q86SQ6 560 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 ZNF512BQ96KM6 892 aaPredicted RBP14.92□□□□□ -0.02
TRAF1-201ENST00000373887 LRRC1Q9BTT6 524 aa14.92□□□□□ -0.02
TRAF1-201ENST00000373887 DLC1Q96QB1 1528 aa14.91□□□□□ -0.02
TRAF1-201ENST00000373887 SERPINB1P30740 379 aa14.91□□□□□ -0.02
TRAF1-201ENST00000373887 CSE1LP55060 971 aaKnown RBP14.91□□□□□ -0.02
TRAF1-201ENST00000373887 SNX17Q15036 470 aa14.91□□□□□ -0.02
TRAF1-201ENST00000373887 ZDHHC15Q96MV8 337 aa14.91□□□□□ -0.02
TRAF1-201ENST00000373887 TMEM117Q9H0C3 514 aa14.91□□□□□ -0.02
TRAF1-201ENST00000373887 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.91□□□□□ -0.02
TRAF1-201ENST00000373887 TRIM17Q9Y577 477 aa14.91□□□□□ -0.02
TRAF1-201ENST00000373887 ARP10275 920 aa14.91□□□□□ -0.02
TRAF1-201ENST00000373887 KLK7P49862 253 aa14.91□□□□□ -0.02
TRAF1-201ENST00000373887 FUT11Q495W5 492 aa14.91□□□□□ -0.02
TRAF1-201ENST00000373887 MTHFD1LQ6UB35 978 aa14.91□□□□□ -0.02
TRAF1-201ENST00000373887 HS6ST3Q8IZP7 471 aa14.91□□□□□ -0.02
TRAF1-201ENST00000373887 ATPAF2Q8N5M1 289 aa14.91□□□□□ -0.02
TRAF1-201ENST00000373887 C10orf53Q8N6V4 93 aa14.91□□□□□ -0.02
TRAF1-201ENST00000373887 BRD8Q9H0E9 1235 aa14.91□□□□□ -0.02
TRAF1-201ENST00000373887 RHBDL2Q9NX52 303 aa14.91□□□□□ -0.02
TRAF1-201ENST00000373887 RRN3P2A6NIE6 340 aa14.91□□□□□ -0.02
TRAF1-201ENST00000373887 EEF2KO00418 725 aaKnown RBP14.91□□□□□ -0.02
TRAF1-201ENST00000373887 FAM107AO95990 144 aa14.91□□□□□ -0.02
TRAF1-201ENST00000373887 NCAM1P13591 858 aa14.91□□□□□ -0.02
TRAF1-201ENST00000373887 HPCAP84074 193 aa14.91□□□□□ -0.02
TRAF1-201ENST00000373887 TRIP10Q15642 601 aa14.91□□□□□ -0.02
TRAF1-201ENST00000373887 CCDC144BQ3MJ40 725 aa14.91□□□□□ -0.02
TRAF1-201ENST00000373887 ENOSF1Q7L5Y1 443 aa14.91□□□□□ -0.02
TRAF1-201ENST00000373887 RASGRP2Q7LDG7 609 aa14.91□□□□□ -0.02
TRAF1-201ENST00000373887 TTC39CQ8N584 583 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms