RNA–Protein interactions for RNA: ENST00000373388.6

CSMD2-206, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSMD2, Length 13,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-206ENST00000373388 ADAM17P78536 824 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 ARHGEF6Q15052 776 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 PEG10Q86TG7 708 aaKnown RBP7.3□□□□□ -1.24
CSMD2-206ENST00000373388 ZNF564Q8TBZ8 553 aaPredicted RBP7.3□□□□□ -1.24
CSMD2-206ENST00000373388 WNK4Q96J92 1243 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 ARHGEF10LQ9HCE6 1279 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 VPS45Q9NRW7 570 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 SPATA7Q9P0W8 599 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 SRPRBQ9Y5M8 271 aaKnown RBP7.3□□□□□ -1.24
CSMD2-206ENST00000373388 GNPATO15228 680 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 VDRP11473 427 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 ACAT1P24752 427 aaKnown RBP7.3□□□□□ -1.24
CSMD2-206ENST00000373388 PLCL1Q15111 1095 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 C4orf22Q6V702 233 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 CCNYQ8ND76 341 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 ZFAND2BQ8WV99 257 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 KCNF1Q9H3M0 494 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 C14orf93Q9H972 538 aaKnown RBP7.3□□□□□ -1.24
CSMD2-206ENST00000373388 PPP2R3BQ9Y5P8 575 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 SYNMO15061 1565 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 ERP29P30040 261 aaKnown RBP7.3□□□□□ -1.24
CSMD2-206ENST00000373388 SLC26A3P40879 764 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 HADHAP40939 763 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 NAA20P61599 178 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 NEDD8Q15843 81 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 EIF2S3LQ2VIR3 472 aaKnown RBP7.3□□□□□ -1.24
CSMD2-206ENST00000373388 SLC45A4Q5BKX6 768 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 SCARA3Q6AZY7 606 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 DENND5AQ6IQ26 1287 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 C17orf80Q9BSJ5 609 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 TRIM54Q9BYV2 358 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 IP6K2Q9UHH9 426 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 UNC13AQ9UPW8 1703 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 TEX46H3BTG2 121 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 PEX1O43933 1283 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 ALDH5A1P51649 535 aaPredicted RBP7.3□□□□□ -1.24
CSMD2-206ENST00000373388 SLC13A1Q9BZW2 595 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 ASNSD1Q9NWL6 643 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 VPS9D1Q9Y2B5 631 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 STMND1H3BQB6 276 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 CLOCKO15516 846 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 DYNLT1P63172 113 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 PTK7Q13308 1070 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 OCLNQ16625 522 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 SAMD4BQ5PRF9 694 aaKnown RBP7.3□□□□□ -1.24
CSMD2-206ENST00000373388 RNF19BQ6ZMZ0 732 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 TRAPPC11Q7Z392 1133 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 KCNK18Q7Z418 384 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 MYDGFQ969H8 173 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 WDR35Q9P2L0 1181 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 HAO1Q9UJM8 370 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 RAB21Q9UL25 225 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 SNX9Q9Y5X1 595 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 CLIC4Q9Y696 253 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 SH3D21A4FU49 640 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 CD3EAPO15446 510 aaKnown RBP7.3□□□□□ -1.24
CSMD2-206ENST00000373388 GYS1P13807 737 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 HNMTP50135 292 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 PSMD4P55036 377 aaKnown RBP7.3□□□□□ -1.24
CSMD2-206ENST00000373388 CSE1LP55060 971 aaKnown RBP7.3□□□□□ -1.24
CSMD2-206ENST00000373388 HEATR6Q6AI08 1181 aaKnown RBP7.3□□□□□ -1.24
CSMD2-206ENST00000373388 PNPT1Q8TCS8 783 aaKnown RBP7.3□□□□□ -1.24
CSMD2-206ENST00000373388 CLK4Q9HAZ1 481 aaKnown RBP7.3□□□□□ -1.24
CSMD2-206ENST00000373388 COQ6Q9Y2Z9 468 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 KNTC1P50748 2209 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 SORBS3O60504 671 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 SHROOM1Q2M3G4 852 aaPredicted RBP7.3□□□□□ -1.24
CSMD2-206ENST00000373388 ZMYM1Q5SVZ6 1142 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 ZNF57Q68EA5 555 aaPredicted RBP7.3□□□□□ -1.24
CSMD2-206ENST00000373388 ZNF398Q8TD17 642 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 TMCO6Q96DC7 493 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 VPS54Q9P1Q0 977 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 WDR19Q8NEZ3 1342 aa7.29□□□□□ -1.24
CSMD2-206ENST00000373388 OR14I1A6ND48 311 aa7.29□□□□□ -1.24
CSMD2-206ENST00000373388 LRRC53A6NM62 1247 aa7.29□□□□□ -1.24
CSMD2-206ENST00000373388 PSMG1O95456 288 aa7.29□□□□□ -1.24
CSMD2-206ENST00000373388 HSMCR30P0CW71 290 aa7.29□□□□□ -1.24
CSMD2-206ENST00000373388 CNTFP26441 200 aa7.29□□□□□ -1.24
CSMD2-206ENST00000373388 NAA30Q147X3 362 aaPredicted RBP7.29□□□□□ -1.24
CSMD2-206ENST00000373388 ODR4Q5SWX8 454 aa7.29□□□□□ -1.24
CSMD2-206ENST00000373388 KLHL24Q6TFL4 600 aa7.29□□□□□ -1.24
CSMD2-206ENST00000373388 FAM129BQ96TA1 746 aa7.29□□□□□ -1.24
CSMD2-206ENST00000373388 ABCA5Q8WWZ7 1642 aa7.29□□□□□ -1.24
CSMD2-206ENST00000373388 FOSP01100 380 aaPredicted RBP7.29□□□□□ -1.24
CSMD2-206ENST00000373388 RASA1P20936 1047 aa7.29□□□□□ -1.24
CSMD2-206ENST00000373388 ZNF200P98182 395 aaPredicted RBP7.29□□□□□ -1.24
CSMD2-206ENST00000373388 RFX4Q33E94 735 aa7.29□□□□□ -1.24
CSMD2-206ENST00000373388 PLET1Q6UQ28 207 aa7.29□□□□□ -1.24
CSMD2-206ENST00000373388 APOL6Q9BWW8 343 aa7.29□□□□□ -1.24
CSMD2-206ENST00000373388 TRPV5Q9NQA5 729 aa7.29□□□□□ -1.24
CSMD2-206ENST00000373388 PHTF1Q9UMS5 762 aa7.29□□□□□ -1.24
CSMD2-206ENST00000373388 FKBP9O95302 570 aa7.29□□□□□ -1.24
CSMD2-206ENST00000373388 TBXAS1P24557 533 aaPredicted RBP7.29□□□□□ -1.24
CSMD2-206ENST00000373388 PSMB9P28065 219 aa7.29□□□□□ -1.24
CSMD2-206ENST00000373388 SOX5P35711 763 aa7.29□□□□□ -1.24
CSMD2-206ENST00000373388 FAM83BQ5T0W9 1011 aa7.29□□□□□ -1.24
CSMD2-206ENST00000373388 FKBP9P1Q75LS8 142 aa7.29□□□□□ -1.24
CSMD2-206ENST00000373388 USP38Q8NB14 1042 aa7.29□□□□□ -1.24
CSMD2-206ENST00000373388 FANCBQ8NB91 859 aa7.29□□□□□ -1.24
CSMD2-206ENST00000373388 MYLPFQ96A32 169 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms