RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 PPP1R21Q6ZMI0 780 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 DDX42Q86XP3 938 aaKnown RBP eCLIP8.64□□□□□ -1.03
GARNL3-201ENST00000373386 SPATA2LQ8IUW3 424 aaPredicted RBP8.64□□□□□ -1.03
GARNL3-201ENST00000373386 SPICE1Q8N0Z3 855 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 SUPT20HQ8NEM7 779 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 BCL7CQ8WUZ0 217 aaPredicted RBP8.64□□□□□ -1.03
GARNL3-201ENST00000373386 NELL2Q99435 816 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 TIPINQ9BVW5 301 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 SMARCAD1Q9H4L7 1026 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 FARSBQ9NSD9 589 aaKnown RBP8.64□□□□□ -1.03
GARNL3-201ENST00000373386 SIRT5Q9NXA8 310 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 NOC2LQ9Y3T9 749 aaKnown RBP8.64□□□□□ -1.03
GARNL3-201ENST00000373386 GPC6Q9Y625 555 aaPredicted RBP8.64□□□□□ -1.03
GARNL3-201ENST00000373386 COMMD3-BMI1R4GMX3 469 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 DDHD2O94830 711 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 ZNF16P17020 682 aaPredicted RBP8.64□□□□□ -1.03
GARNL3-201ENST00000373386 PRKACAP17612 351 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 STAT1P42224 750 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 MTHFRP42898 656 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 SCNN1DP51172 638 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 CASP5P51878 434 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 HPCAP84074 193 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 SEMA3AQ14563 771 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 Q3C1V9 767 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 CATSPER4Q7RTX7 472 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 NELFCDQ8IXH7 590 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 BBOF1Q8ND07 529 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 SLC17A8Q8NDX2 589 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 TPCN2Q8NHX9 752 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 UBLCP1Q8WVY7 318 aaPredicted RBP8.64□□□□□ -1.03
GARNL3-201ENST00000373386 HES6Q96HZ4 224 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 NACC1Q96RE7 527 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 SNX25Q9H3E2 840 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 PPCSQ9HAB8 311 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 POLD4Q9HCU8 107 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 CHST12Q9NRB3 414 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 TMX2Q9Y320 296 aa8.64□□□□□ -1.03
GARNL3-201ENST00000373386 NPHP3-ACAD11A0A0J9YXS1 232 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 C5orf60A6NFR6 353 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 FAM47E-STBD1D6RA91 191 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 G3V3G9 751 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 MATN2O00339 956 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 TGFB1I1O43294 461 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 TMEM253P0C7T8 217 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 CHRNB1P11230 501 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 CCND1P24385 295 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 HNF1BP35680 557 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 PRELPP51888 382 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 MTERF2Q49AM1 385 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 ZC3H12BQ5HYM0 836 aaKnown RBP8.63□□□□□ -1.03
GARNL3-201ENST00000373386 DCAF8Q5TAQ9 597 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 ALKBH5Q6P6C2 394 aaKnown RBP8.63□□□□□ -1.03
GARNL3-201ENST00000373386 FAM160B2Q86V87 743 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 ZFPM1Q8IX07 1006 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 SLC22A8Q8TCC7 542 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 TMC2Q8TDI7 906 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 STARD8Q92502 1023 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 GFM2Q969S9 779 aaKnown RBP8.63□□□□□ -1.03
GARNL3-201ENST00000373386 FIZ1Q96SL8 496 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 RIT2Q99578 217 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 NIFKQ9BYG3 293 aaKnown RBP8.63□□□□□ -1.03
GARNL3-201ENST00000373386 ST6GALNAC4Q9H4F1 302 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 CNOT10Q9H9A5 744 aaKnown RBP8.63□□□□□ -1.03
GARNL3-201ENST00000373386 C12orf4Q9NQ89 552 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 FAM114A2Q9NRY5 505 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 HACD3Q9P035 362 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 F8W031 263 aaPredicted RBP8.63□□□□□ -1.03
GARNL3-201ENST00000373386 KRIT1O00522 736 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 SERPINB7O75635 380 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 ITGA2BP08514 1039 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 SFTPCP11686 197 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 MZF1P28698 734 aaPredicted RBP8.63□□□□□ -1.03
GARNL3-201ENST00000373386 HMOX2P30519 316 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 CBX5P45973 191 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 STAT2P52630 851 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 ADARP55265 1226 aaKnown RBP8.63□□□□□ -1.03
GARNL3-201ENST00000373386 EIF3BP55884 814 aaKnown RBP8.63□□□□□ -1.03
GARNL3-201ENST00000373386 PSMC6P62333 389 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 LSAMPQ13449 338 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 ODF2Q5BJF6 829 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 SMYD5Q6GMV2 418 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 TMEM154Q6P9G4 183 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 PEX26Q7Z412 305 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 GALNT7Q86SF2 657 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 METTL13Q8N6R0 699 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 AZIN2Q96A70 460 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 IFT43Q96FT9 208 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 SLC39A13Q96H72 371 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 CIB1Q99828 191 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 HAUS8Q9BT25 410 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 TRIM8Q9BZR9 551 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 ZNF277Q9NRM2 450 aaPredicted RBP8.63□□□□□ -1.03
GARNL3-201ENST00000373386 SRCAPQ6ZRS2 3230 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 PFASO15067 1338 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 ECE2O60344 883 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 SLITRK3O94933 977 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 OR5F1O95221 314 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 H2AFZP0C0S5 128 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 KRT13P13646 458 aa8.63□□□□□ -1.03
GARNL3-201ENST00000373386 SOX5P35711 763 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms