RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 LIG3P49916 1009 aa19.76■□□□□ 0.75
USP49-202ENST00000373010 SMTNL2Q2TAL5 461 aa19.76■□□□□ 0.75
USP49-202ENST00000373010 EMC1Q8N766 993 aa19.76■□□□□ 0.75
USP49-202ENST00000373010 ATXN2LQ8WWM7 1075 aaKnown RBP19.76■□□□□ 0.75
USP49-202ENST00000373010 CENPTQ96BT3 561 aa19.76■□□□□ 0.75
USP49-202ENST00000373010 L3MBTL3Q96JM7 780 aaPredicted RBP19.76■□□□□ 0.75
USP49-202ENST00000373010 PNMA3Q9UL41 463 aa19.76■□□□□ 0.75
USP49-202ENST00000373010 SIGLEC16A6NMB1 481 aa19.76■□□□□ 0.75
USP49-202ENST00000373010 ERBB2P04626 1255 aa19.76■□□□□ 0.75
USP49-202ENST00000373010 POLR2BP30876 1174 aaKnown RBP19.76■□□□□ 0.75
USP49-202ENST00000373010 TNFAIP2Q03169 654 aa19.76■□□□□ 0.75
USP49-202ENST00000373010 TFDP3Q5H9I0 405 aa19.76■□□□□ 0.75
USP49-202ENST00000373010 HIBCHQ6NVY1 386 aaPredicted RBP19.76■□□□□ 0.75
USP49-202ENST00000373010 EXOC3L1Q86VI1 746 aa19.76■□□□□ 0.75
USP49-202ENST00000373010 KIAA0319LQ8IZA0 1049 aa19.76■□□□□ 0.75
USP49-202ENST00000373010 BBOF1Q8ND07 529 aa19.76■□□□□ 0.75
USP49-202ENST00000373010 PPTC7Q8NI37 304 aa19.76■□□□□ 0.75
USP49-202ENST00000373010 C9orf72Q96LT7 481 aa19.76■□□□□ 0.75
USP49-202ENST00000373010 C16orf70Q9BSU1 422 aa19.76■□□□□ 0.75
USP49-202ENST00000373010 TSPYL1Q9H0U9 437 aa19.76■□□□□ 0.75
USP49-202ENST00000373010 STMN4Q9H169 189 aaPredicted RBP19.76■□□□□ 0.75
USP49-202ENST00000373010 ZNF408Q9H9D4 720 aa19.76■□□□□ 0.75
USP49-202ENST00000373010 A0A087WUV0 522 aaPredicted RBP19.75■□□□□ 0.75
USP49-202ENST00000373010 PDHXO00330 501 aa19.75■□□□□ 0.75
USP49-202ENST00000373010 MAGEB2O15479 319 aa19.75■□□□□ 0.75
USP49-202ENST00000373010 CILPO75339 1184 aa19.75■□□□□ 0.75
USP49-202ENST00000373010 DRD4P21917 467 aa19.75■□□□□ 0.75
USP49-202ENST00000373010 IL1R2P27930 398 aa19.75■□□□□ 0.75
USP49-202ENST00000373010 COPS2P61201 443 aa19.75■□□□□ 0.75
USP49-202ENST00000373010 PTPN11Q06124 597 aaPredicted RBP19.75■□□□□ 0.75
USP49-202ENST00000373010 POU5F1BQ06416 359 aa19.75■□□□□ 0.75
USP49-202ENST00000373010 KCNT1Q5JUK3 1230 aa19.75■□□□□ 0.75
USP49-202ENST00000373010 MTHFD1LQ6UB35 978 aa19.75■□□□□ 0.75
USP49-202ENST00000373010 SPATS2Q86XZ4 545 aaKnown RBP19.75■□□□□ 0.75
USP49-202ENST00000373010 XYLT1Q86Y38 959 aa19.75■□□□□ 0.75
USP49-202ENST00000373010 NLRP7Q8WX94 980 aa19.75■□□□□ 0.75
USP49-202ENST00000373010 SYNCQ9H7C4 482 aa19.75■□□□□ 0.75
USP49-202ENST00000373010 VTA1Q9NP79 307 aa19.75■□□□□ 0.75
USP49-202ENST00000373010 METTL5Q9NRN9 209 aaKnown RBP19.75■□□□□ 0.75
USP49-202ENST00000373010 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.75■□□□□ 0.75
USP49-202ENST00000373010 DDX56Q9NY93 547 aaKnown RBP19.75■□□□□ 0.75
USP49-202ENST00000373010 MICAL2O94851 1124 aa19.75■□□□□ 0.75
USP49-202ENST00000373010 KIAA0754O94854 1291 aa19.75■□□□□ 0.75
USP49-202ENST00000373010 LMNB2Q03252 620 aa19.75■□□□□ 0.75
USP49-202ENST00000373010 IFT88Q13099 833 aa19.75■□□□□ 0.75
USP49-202ENST00000373010 MICALCLQ6ZW33 695 aa19.75■□□□□ 0.75
USP49-202ENST00000373010 ILDR2Q71H61 639 aa19.75■□□□□ 0.75
USP49-202ENST00000373010 DPH6Q7L8W6 267 aa19.75■□□□□ 0.75
USP49-202ENST00000373010 IFNLR1Q8IU57 520 aaPredicted RBP19.75■□□□□ 0.75
USP49-202ENST00000373010 ALLCQ8N6M5 410 aa19.75■□□□□ 0.75
USP49-202ENST00000373010 AGAP1Q9UPQ3 857 aa19.75■□□□□ 0.75
USP49-202ENST00000373010 C3orf70A6NLC5 250 aaPredicted RBP19.74■□□□□ 0.75
USP49-202ENST00000373010 LRCH4O75427 683 aa19.74■□□□□ 0.75
USP49-202ENST00000373010 CREB1P16220 341 aa19.74■□□□□ 0.75
USP49-202ENST00000373010 ARSEP51690 589 aa19.74■□□□□ 0.75
USP49-202ENST00000373010 DYNLT1P63172 113 aa19.74■□□□□ 0.75
USP49-202ENST00000373010 CCNA1P78396 465 aa19.74■□□□□ 0.75
USP49-202ENST00000373010 SLC25A11Q02978 314 aaKnown RBP19.74■□□□□ 0.75
USP49-202ENST00000373010 TADA2BQ86TJ2 420 aa19.74■□□□□ 0.75
USP49-202ENST00000373010 CHMP6Q96FZ7 201 aa19.74■□□□□ 0.75
USP49-202ENST00000373010 TMEM176AQ96HP8 235 aa19.74■□□□□ 0.75
USP49-202ENST00000373010 HPDLQ96IR7 371 aa19.74■□□□□ 0.75
USP49-202ENST00000373010 SERPINB12Q96P63 405 aa19.74■□□□□ 0.75
USP49-202ENST00000373010 INTS9Q9NV88 658 aaKnown RBP19.74■□□□□ 0.75
USP49-202ENST00000373010 SAE1Q9UBE0 346 aaPredicted RBP19.74■□□□□ 0.75
USP49-202ENST00000373010 C5orf60A6NFR6 353 aa19.74■□□□□ 0.75
USP49-202ENST00000373010 SNAI1O95863 264 aaPredicted RBP19.74■□□□□ 0.75
USP49-202ENST00000373010 PTPN7P35236 360 aa19.74■□□□□ 0.75
USP49-202ENST00000373010 TMEM132DQ14C87 1099 aa19.74■□□□□ 0.75
USP49-202ENST00000373010 DRICH1Q6PGQ1 229 aaPredicted RBP19.74■□□□□ 0.75
USP49-202ENST00000373010 CPLX4Q7Z7G2 160 aa19.74■□□□□ 0.75
USP49-202ENST00000373010 OTUD6BQ8N6M0 293 aa19.74■□□□□ 0.75
USP49-202ENST00000373010 SEC16BQ96JE7 1060 aa19.74■□□□□ 0.75
USP49-202ENST00000373010 SYT17Q9BSW7 474 aa19.74■□□□□ 0.75
USP49-202ENST00000373010 KATNBL1Q9H079 304 aa19.74■□□□□ 0.75
USP49-202ENST00000373010 ASB7Q9H672 318 aa19.74■□□□□ 0.75
USP49-202ENST00000373010 H3BRB1 525 aa19.73■□□□□ 0.75
USP49-202ENST00000373010 M0QYV0 167 aa19.73■□□□□ 0.75
USP49-202ENST00000373010 VCPP55072 806 aaKnown RBP19.73■□□□□ 0.75
USP49-202ENST00000373010 GPS1Q13098 491 aa19.73■□□□□ 0.75
USP49-202ENST00000373010 RNF187Q5TA31 235 aaPredicted RBP19.73■□□□□ 0.75
USP49-202ENST00000373010 MAP1SQ66K74 1059 aaPredicted RBP19.73■□□□□ 0.75
USP49-202ENST00000373010 C6orf89Q6UWU4 347 aa19.73■□□□□ 0.75
USP49-202ENST00000373010 UPF1Q92900 1129 aaKnown RBP eCLIP19.73■□□□□ 0.75
USP49-202ENST00000373010 ARHGEF2Q92974 986 aaKnown RBP19.73■□□□□ 0.75
USP49-202ENST00000373010 PRMT1Q99873 361 aaKnown RBP19.73■□□□□ 0.75
USP49-202ENST00000373010 TMEM121Q9BTD3 319 aa19.73■□□□□ 0.75
USP49-202ENST00000373010 TUT1Q9H6E5 874 aaKnown RBP19.73■□□□□ 0.75
USP49-202ENST00000373010 C10orf88Q9H8K7 445 aa19.73■□□□□ 0.75
USP49-202ENST00000373010 ATXN2Q99700 1313 aaKnown RBP19.73■□□□□ 0.75
USP49-202ENST00000373010 RBM47A0AV96 593 aaKnown RBP19.73■□□□□ 0.75
USP49-202ENST00000373010 BTBD19C9JJ37 291 aa19.73■□□□□ 0.75
USP49-202ENST00000373010 DNALI1O14645 258 aaPredicted RBP19.73■□□□□ 0.75
USP49-202ENST00000373010 TSPAN1O60635 241 aa19.73■□□□□ 0.75
USP49-202ENST00000373010 CETPP11597 493 aa19.73■□□□□ 0.75
USP49-202ENST00000373010 PLCB3Q01970 1234 aa19.73■□□□□ 0.75
USP49-202ENST00000373010 OASLQ15646 514 aaKnown RBP19.73■□□□□ 0.75
USP49-202ENST00000373010 TAOK1Q7L7X3 1001 aa19.73■□□□□ 0.75
USP49-202ENST00000373010 MICALL1Q8N3F8 863 aa19.73■□□□□ 0.75
USP49-202ENST00000373010 ZCCHC9Q8N567 271 aaKnown RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms