RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 ACADSP16219 412 aa17.23■□□□□ 0.35
SDC4-201ENST00000372733 CDKN2BP42772 138 aa17.23■□□□□ 0.35
SDC4-201ENST00000372733 MCL1Q07820 350 aa17.23■□□□□ 0.35
SDC4-201ENST00000372733 RASA2Q15283 850 aa17.23■□□□□ 0.35
SDC4-201ENST00000372733 SPDYAQ5MJ70 313 aa17.23■□□□□ 0.35
SDC4-201ENST00000372733 NLGN1Q8N2Q7 840 aa17.23■□□□□ 0.35
SDC4-201ENST00000372733 PYROXD1Q8WU10 500 aa17.23■□□□□ 0.35
SDC4-201ENST00000372733 MZB1Q8WU39 189 aa17.23■□□□□ 0.35
SDC4-201ENST00000372733 ZBTB45Q96K62 511 aaPredicted RBP17.23■□□□□ 0.35
SDC4-201ENST00000372733 PDCD2LQ9BRP1 358 aa17.23■□□□□ 0.35
SDC4-201ENST00000372733 DCLRE1BQ9H816 532 aa17.23■□□□□ 0.35
SDC4-201ENST00000372733 ARHGAP28Q9P2N2 729 aa17.23■□□□□ 0.35
SDC4-201ENST00000372733 HEY2Q9UBP5 337 aa17.23■□□□□ 0.35
SDC4-201ENST00000372733 SEPT9Q9UHD8 586 aaPredicted RBP17.23■□□□□ 0.35
SDC4-201ENST00000372733 DRG1Q9Y295 367 aaKnown RBP17.23■□□□□ 0.35
SDC4-201ENST00000372733 FARP1Q9Y4F1 1045 aaPredicted RBP17.23■□□□□ 0.35
SDC4-201ENST00000372733 KRT36O76013 467 aa17.22■□□□□ 0.35
SDC4-201ENST00000372733 ITGAVP06756 1048 aa17.22■□□□□ 0.35
SDC4-201ENST00000372733 RCN1Q15293 331 aa17.22■□□□□ 0.35
SDC4-201ENST00000372733 TFDP3Q5H9I0 405 aa17.22■□□□□ 0.35
SDC4-201ENST00000372733 DNAJC24Q6P3W2 148 aa17.22■□□□□ 0.35
SDC4-201ENST00000372733 LRRC6Q86X45 466 aa17.22■□□□□ 0.35
SDC4-201ENST00000372733 ATP11CQ8NB49 1132 aa17.22■□□□□ 0.35
SDC4-201ENST00000372733 PPCSQ9HAB8 311 aa17.22■□□□□ 0.35
SDC4-201ENST00000372733 AGO2Q9UKV8 859 aaKnown RBP17.22■□□□□ 0.35
SDC4-201ENST00000372733 STBD1O95210 358 aa17.22■□□□□ 0.35
SDC4-201ENST00000372733 CMPK2Q5EBM0 449 aa17.22■□□□□ 0.35
SDC4-201ENST00000372733 DCUN1D2Q6PH85 259 aa17.22■□□□□ 0.35
SDC4-201ENST00000372733 OR5B17Q8NGF7 314 aa17.22■□□□□ 0.35
SDC4-201ENST00000372733 ZNF398Q8TD17 642 aa17.22■□□□□ 0.35
SDC4-201ENST00000372733 CPT1BQ92523 772 aa17.22■□□□□ 0.35
SDC4-201ENST00000372733 PTCD3Q96EY7 689 aaKnown RBP17.22■□□□□ 0.35
SDC4-201ENST00000372733 SYT15Q9BQS2 421 aa17.22■□□□□ 0.35
SDC4-201ENST00000372733 C17orf75Q9HAS0 396 aa17.22■□□□□ 0.35
SDC4-201ENST00000372733 SSU72Q9NP77 194 aaKnown RBP17.22■□□□□ 0.35
SDC4-201ENST00000372733 RBAKQ9NYW8 714 aaPredicted RBP17.22■□□□□ 0.35
SDC4-201ENST00000372733 PCDHA10Q9Y5I2 948 aa17.22■□□□□ 0.35
SDC4-201ENST00000372733 TCRBV7S3A2A0A539 114 aa17.21■□□□□ 0.35
SDC4-201ENST00000372733 C2orf71A6NGG8 1288 aa17.21■□□□□ 0.35
SDC4-201ENST00000372733 NVLO15381 856 aaKnown RBP17.21■□□□□ 0.35
SDC4-201ENST00000372733 ZBED4O75132 1171 aa17.21■□□□□ 0.35
SDC4-201ENST00000372733 MRPS35P82673 323 aaKnown RBP17.21■□□□□ 0.35
SDC4-201ENST00000372733 KPNB1Q14974 876 aaKnown RBP17.21■□□□□ 0.35
SDC4-201ENST00000372733 CCDC6Q16204 474 aa17.21■□□□□ 0.35
SDC4-201ENST00000372733 C3orf62Q6ZUJ4 267 aa17.21■□□□□ 0.35
SDC4-201ENST00000372733 FBXO36Q8NEA4 188 aa17.21■□□□□ 0.35
SDC4-201ENST00000372733 SPDYE1Q8NFV5 336 aaPredicted RBP17.21■□□□□ 0.35
SDC4-201ENST00000372733 SLC35B2Q8TB61 432 aa17.21■□□□□ 0.35
SDC4-201ENST00000372733 SH3TC2Q8TF17 1288 aa17.21■□□□□ 0.35
SDC4-201ENST00000372733 ZNF606Q8WXB4 792 aa17.21■□□□□ 0.35
SDC4-201ENST00000372733 ACSS3Q9H6R3 686 aa17.21■□□□□ 0.35
SDC4-201ENST00000372733 PXMP2Q9NR77 195 aa17.21■□□□□ 0.35
SDC4-201ENST00000372733 SPATS2LQ9NUQ6 558 aaKnown RBP17.21■□□□□ 0.35
SDC4-201ENST00000372733 BRD2P25440 801 aaKnown RBP17.21■□□□□ 0.35
SDC4-201ENST00000372733 SERPINB3P29508 390 aa17.21■□□□□ 0.35
SDC4-201ENST00000372733 PHBP35232 272 aa17.21■□□□□ 0.35
SDC4-201ENST00000372733 ARL4CP56559 192 aa17.21■□□□□ 0.35
SDC4-201ENST00000372733 GHRHRQ02643 423 aa17.21■□□□□ 0.35
SDC4-201ENST00000372733 ENPEPQ07075 957 aa17.21■□□□□ 0.35
SDC4-201ENST00000372733 SMTNL2Q2TAL5 461 aa17.21■□□□□ 0.35
SDC4-201ENST00000372733 SEZ6Q53EL9 994 aa17.21■□□□□ 0.35
SDC4-201ENST00000372733 ACSBG2Q5FVE4 666 aa17.21■□□□□ 0.35
SDC4-201ENST00000372733 MEX3CQ5U5Q3 659 aaKnown RBP17.21■□□□□ 0.35
SDC4-201ENST00000372733 ADGRD1Q6QNK2 874 aa17.21■□□□□ 0.35
SDC4-201ENST00000372733 BANPQ8N9N5 519 aa17.21■□□□□ 0.35
SDC4-201ENST00000372733 ACTL9Q8TC94 416 aa17.21■□□□□ 0.35
SDC4-201ENST00000372733 DCAKDQ8WVC6 231 aa17.21■□□□□ 0.35
SDC4-201ENST00000372733 UCMAQ8WVF2 138 aa17.21■□□□□ 0.35
SDC4-201ENST00000372733 ZNF333Q96JL9 665 aa17.21■□□□□ 0.35
SDC4-201ENST00000372733 DHRS4Q9BTZ2 278 aa17.21■□□□□ 0.35
SDC4-201ENST00000372733 TSSK1BQ9BXA7 367 aa17.21■□□□□ 0.35
SDC4-201ENST00000372733 TRIM55Q9BYV6 548 aa17.21■□□□□ 0.35
SDC4-201ENST00000372733 MANSC1Q9H8J5 431 aa17.21■□□□□ 0.35
SDC4-201ENST00000372733 ZNRF3Q9ULT6 936 aa17.21■□□□□ 0.35
SDC4-201ENST00000372733 RPL26L1Q9UNX3 145 aaKnown RBP17.21■□□□□ 0.35
SDC4-201ENST00000372733 TMEM63AO94886 807 aa17.2■□□□□ 0.34
SDC4-201ENST00000372733 MXRA7P84157 204 aa17.2■□□□□ 0.34
SDC4-201ENST00000372733 OTUD4Q01804 1114 aaKnown RBP17.2■□□□□ 0.34
SDC4-201ENST00000372733 KLC1Q07866 573 aa17.2■□□□□ 0.34
SDC4-201ENST00000372733 BBS9Q3SYG4 887 aa17.2■□□□□ 0.34
SDC4-201ENST00000372733 CYP4A22Q5TCH4 519 aa17.2■□□□□ 0.34
SDC4-201ENST00000372733 LRRC38Q5VT99 294 aa17.2■□□□□ 0.34
SDC4-201ENST00000372733 ARHGEF16Q5VV41 709 aa17.2■□□□□ 0.34
SDC4-201ENST00000372733 SWSAP1Q6NVH7 229 aa17.2■□□□□ 0.34
SDC4-201ENST00000372733 TTC7BQ86TV6 843 aa17.2■□□□□ 0.34
SDC4-201ENST00000372733 PPIL6Q8IXY8 311 aa17.2■□□□□ 0.34
SDC4-201ENST00000372733 MCPH1Q8NEM0 835 aa17.2■□□□□ 0.34
SDC4-201ENST00000372733 NRG4Q8WWG1 115 aa17.2■□□□□ 0.34
SDC4-201ENST00000372733 ZBTB10Q96DT7 871 aa17.2■□□□□ 0.34
SDC4-201ENST00000372733 BTBD10Q9BSF8 475 aa17.2■□□□□ 0.34
SDC4-201ENST00000372733 TMEM120AQ9BXJ8 343 aa17.2■□□□□ 0.34
SDC4-201ENST00000372733 METTL5Q9NRN9 209 aaKnown RBP17.2■□□□□ 0.34
SDC4-201ENST00000372733 GINM1Q9NU53 330 aa17.2■□□□□ 0.34
SDC4-201ENST00000372733 STOML1Q9UBI4 398 aa17.2■□□□□ 0.34
SDC4-201ENST00000372733 CCDC22O60826 627 aa17.2■□□□□ 0.34
SDC4-201ENST00000372733 LMNAP02545 664 aaKnown RBP17.2■□□□□ 0.34
SDC4-201ENST00000372733 PRKCEQ02156 737 aa17.2■□□□□ 0.34
SDC4-201ENST00000372733 ZNF394Q53GI3 561 aa17.2■□□□□ 0.34
SDC4-201ENST00000372733 TMEM154Q6P9G4 183 aa17.2■□□□□ 0.34
SDC4-201ENST00000372733 SNCAIPQ9Y6H5 919 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms