RNA–Protein interactions for RNA: ENST00000371509.8

SCP2-201, Transcript of sterol carrier protein 2, humanhuman

TSL 1 (best) BASIC

Gene SCP2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-201ENST00000371509 NXF1Q9UBU9 619 aaKnown RBP17.62■□□□□ 0.41
SCP2-201ENST00000371509 POLIQ9UNA4 740 aa17.62■□□□□ 0.41
SCP2-201ENST00000371509 SPTLC1O15269 473 aa17.61■□□□□ 0.41
SCP2-201ENST00000371509 SEC31AO94979 1220 aaKnown RBP17.61■□□□□ 0.41
SCP2-201ENST00000371509 ASS1P00966 412 aaKnown RBP17.61■□□□□ 0.41
SCP2-201ENST00000371509 ATP2A2P16615 1042 aaKnown RBP17.61■□□□□ 0.41
SCP2-201ENST00000371509 TBXAS1P24557 533 aaPredicted RBP17.61■□□□□ 0.41
SCP2-201ENST00000371509 OR1G1P47890 313 aa17.61■□□□□ 0.41
SCP2-201ENST00000371509 GPC5P78333 572 aa17.61■□□□□ 0.41
SCP2-201ENST00000371509 WDR72Q3MJ13 1102 aa17.61■□□□□ 0.41
SCP2-201ENST00000371509 DAAM2Q86T65 1068 aa17.61■□□□□ 0.41
SCP2-201ENST00000371509 ZNF677Q86XU0 584 aa17.61■□□□□ 0.41
SCP2-201ENST00000371509 LRRC43Q8N309 656 aa17.61■□□□□ 0.41
SCP2-201ENST00000371509 UBR7Q8N806 425 aa17.61■□□□□ 0.41
SCP2-201ENST00000371509 TAF4BQ92750 862 aa17.61■□□□□ 0.41
SCP2-201ENST00000371509 HES6Q96HZ4 224 aa17.61■□□□□ 0.41
SCP2-201ENST00000371509 PBKQ96KB5 322 aa17.61■□□□□ 0.41
SCP2-201ENST00000371509 RNPC3Q96LT9 517 aaKnown RBP17.61■□□□□ 0.41
SCP2-201ENST00000371509 ZBED2Q9BTP6 218 aa17.61■□□□□ 0.41
SCP2-201ENST00000371509 MRPL9Q9BYD2 267 aaKnown RBP17.61■□□□□ 0.41
SCP2-201ENST00000371509 IMPG2Q9BZV3 1241 aa17.61■□□□□ 0.41
SCP2-201ENST00000371509 RANBP2P49792 3224 aaKnown RBP17.61■□□□□ 0.41
SCP2-201ENST00000371509 ITGB1P05556 798 aa17.61■□□□□ 0.41
SCP2-201ENST00000371509 BTG3Q14201 252 aaPredicted RBP17.61■□□□□ 0.41
SCP2-201ENST00000371509 CLEC16AQ2KHT3 1053 aa17.61■□□□□ 0.41
SCP2-201ENST00000371509 C11orf63Q6NUN7 778 aa17.61■□□□□ 0.41
SCP2-201ENST00000371509 SCARA5Q6ZMJ2 495 aa17.61■□□□□ 0.41
SCP2-201ENST00000371509 HERC6Q8IVU3 1022 aa17.61■□□□□ 0.41
SCP2-201ENST00000371509 UBE2OQ9C0C9 1292 aaKnown RBP17.61■□□□□ 0.41
SCP2-201ENST00000371509 MTIF3Q9H2K0 278 aaKnown RBP17.61■□□□□ 0.41
SCP2-201ENST00000371509 PRG3Q9Y2Y8 225 aaPredicted RBP17.61■□□□□ 0.41
SCP2-201ENST00000371509 NT5C1B-RDH14C9J2C7 533 aa17.6■□□□□ 0.41
SCP2-201ENST00000371509 B3GAT3O94766 335 aa17.6■□□□□ 0.41
SCP2-201ENST00000371509 CYP1A2P05177 515 aa17.6■□□□□ 0.41
SCP2-201ENST00000371509 DNA2P51530 1060 aa17.6■□□□□ 0.41
SCP2-201ENST00000371509 BPIFB4P59827 614 aa17.6■□□□□ 0.41
SCP2-201ENST00000371509 MYO1EQ12965 1108 aa17.6■□□□□ 0.41
SCP2-201ENST00000371509 RASIP1Q5U651 963 aa17.6■□□□□ 0.41
SCP2-201ENST00000371509 SMYD5Q6GMV2 418 aa17.6■□□□□ 0.41
SCP2-201ENST00000371509 FAM109BQ6ICB4 259 aaPredicted RBP17.6■□□□□ 0.41
SCP2-201ENST00000371509 RUBCNQ92622 972 aa17.6■□□□□ 0.41
SCP2-201ENST00000371509 SLC9A7Q96T83 725 aa17.6■□□□□ 0.41
SCP2-201ENST00000371509 GDF15Q99988 308 aa17.6■□□□□ 0.41
SCP2-201ENST00000371509 CWH43Q9H720 699 aa17.6■□□□□ 0.41
SCP2-201ENST00000371509 RBM12Q9NTZ6 932 aaKnown RBP17.6■□□□□ 0.41
SCP2-201ENST00000371509 GRXCR1A8MXD5 290 aa17.59■□□□□ 0.41
SCP2-201ENST00000371509 I3L4J1 428 aa17.59■□□□□ 0.41
SCP2-201ENST00000371509 KCNK3O14649 394 aa17.59■□□□□ 0.41
SCP2-201ENST00000371509 ATICP31939 592 aa17.59■□□□□ 0.41
SCP2-201ENST00000371509 RPL9P32969 192 aaKnown RBP17.59■□□□□ 0.41
SCP2-201ENST00000371509 RGS19P49795 217 aa17.59■□□□□ 0.41
SCP2-201ENST00000371509 RABGGTBP53611 331 aa17.59■□□□□ 0.41
SCP2-201ENST00000371509 LILRA4P59901 499 aa17.59■□□□□ 0.41
SCP2-201ENST00000371509 LONRF2Q1L5Z9 754 aa17.59■□□□□ 0.41
SCP2-201ENST00000371509 ZNF667Q5HYK9 610 aa17.59■□□□□ 0.41
SCP2-201ENST00000371509 BEND6Q5SZJ8 279 aaPredicted RBP17.59■□□□□ 0.41
SCP2-201ENST00000371509 SPOUT1Q5T280 376 aaKnown RBP17.59■□□□□ 0.41
SCP2-201ENST00000371509 LRRC52Q8N7C0 313 aa17.59■□□□□ 0.41
SCP2-201ENST00000371509 ZNF560Q96MR9 790 aa17.59■□□□□ 0.41
SCP2-201ENST00000371509 GTF3C4Q9UKN8 822 aa17.59■□□□□ 0.41
SCP2-201ENST00000371509 AMFRQ9UKV5 643 aa17.59■□□□□ 0.41
SCP2-201ENST00000371509 SNX9Q9Y5X1 595 aa17.59■□□□□ 0.41
SCP2-201ENST00000371509 KIAA1671Q9BY89 1806 aa17.59■□□□□ 0.41
SCP2-201ENST00000371509 GBF1Q92538 1859 aa17.59■□□□□ 0.41
SCP2-201ENST00000371509 NRP1O14786 923 aa17.58■□□□□ 0.41
SCP2-201ENST00000371509 RAP1GAPP47736 663 aa17.58■□□□□ 0.41
SCP2-201ENST00000371509 SLC11A1P49279 550 aa17.58■□□□□ 0.41
SCP2-201ENST00000371509 TAF6P49848 677 aa17.58■□□□□ 0.41
SCP2-201ENST00000371509 ZNF132P52740 706 aa17.58■□□□□ 0.41
SCP2-201ENST00000371509 ACAD10Q6JQN1 1059 aa17.58■□□□□ 0.41
SCP2-201ENST00000371509 CD300LGQ6UXG3 332 aa17.58■□□□□ 0.41
SCP2-201ENST00000371509 PHOSPHO2Q8TCD6 241 aa17.58■□□□□ 0.41
SCP2-201ENST00000371509 ACTRT1Q8TDG2 376 aa17.58■□□□□ 0.41
SCP2-201ENST00000371509 DDX27Q96GQ7 796 aaKnown RBP17.58■□□□□ 0.41
SCP2-201ENST00000371509 UROC1Q96N76 676 aa17.58■□□□□ 0.41
SCP2-201ENST00000371509 TMEM59LQ9UK28 342 aa17.58■□□□□ 0.41
SCP2-201ENST00000371509 MRPL42Q9Y6G3 142 aaKnown RBP17.58■□□□□ 0.41
SCP2-201ENST00000371509 CEP290O15078 2479 aa17.58■□□□□ 0.4
SCP2-201ENST00000371509 LCHNA4D1U4 455 aa17.58■□□□□ 0.4
SCP2-201ENST00000371509 KPNA7A9QM74 516 aa17.58■□□□□ 0.4
SCP2-201ENST00000371509 TLL1O43897 1013 aa17.58■□□□□ 0.4
SCP2-201ENST00000371509 CALCAP01258 141 aa17.58■□□□□ 0.4
SCP2-201ENST00000371509 UNGP13051 313 aaPredicted RBP17.58■□□□□ 0.4
SCP2-201ENST00000371509 ASPAP45381 313 aa17.58■□□□□ 0.4
SCP2-201ENST00000371509 BRCC3P46736 316 aa17.58■□□□□ 0.4
SCP2-201ENST00000371509 CDH8P55286 799 aa17.58■□□□□ 0.4
SCP2-201ENST00000371509 BCAR1P56945 870 aa17.58■□□□□ 0.4
SCP2-201ENST00000371509 HTRA4P83105 476 aaPredicted RBP17.58■□□□□ 0.4
SCP2-201ENST00000371509 TMEM173Q86WV6 379 aaPredicted RBP17.58■□□□□ 0.4
SCP2-201ENST00000371509 CMTR2Q8IYT2 770 aaKnown RBP17.58■□□□□ 0.4
SCP2-201ENST00000371509 RASGEF1CQ8N431 466 aa17.58■□□□□ 0.4
SCP2-201ENST00000371509 NIF3L1Q9GZT8 377 aa17.58■□□□□ 0.4
SCP2-201ENST00000371509 SMYD3Q9H7B4 428 aa17.58■□□□□ 0.4
SCP2-201ENST00000371509 VRTNQ9H8Y1 702 aa17.58■□□□□ 0.4
SCP2-201ENST00000371509 CTTNBP2NLQ9P2B4 639 aa17.58■□□□□ 0.4
SCP2-201ENST00000371509 LAMA3Q16787 3333 aa17.57■□□□□ 0.4
SCP2-201ENST00000371509 FAM170AA1A519 330 aa17.57■□□□□ 0.4
SCP2-201ENST00000371509 DDX3YO15523 660 aaKnown RBP17.57■□□□□ 0.4
SCP2-201ENST00000371509 ALDH2P05091 517 aa17.57■□□□□ 0.4
SCP2-201ENST00000371509 GALTP07902 379 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms