RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 HEY1Q9Y5J3 304 aa12.39□□□□□ -0.43
PDE6C-201ENST00000371447 NPTXRO95502 500 aa12.39□□□□□ -0.43
PDE6C-201ENST00000371447 PIGRP01833 764 aa12.39□□□□□ -0.43
PDE6C-201ENST00000371447 ERBB2P04626 1255 aa12.39□□□□□ -0.43
PDE6C-201ENST00000371447 NDST1P52848 882 aa12.39□□□□□ -0.43
PDE6C-201ENST00000371447 CLUL1Q15846 466 aa12.39□□□□□ -0.43
PDE6C-201ENST00000371447 PPP6R3Q5H9R7 873 aaPredicted RBP12.39□□□□□ -0.43
PDE6C-201ENST00000371447 FAXCQ5TGI0 409 aa12.39□□□□□ -0.43
PDE6C-201ENST00000371447 TRIM72Q6ZMU5 477 aa12.39□□□□□ -0.43
PDE6C-201ENST00000371447 PHF13Q86YI8 300 aaPredicted RBP12.39□□□□□ -0.43
PDE6C-201ENST00000371447 KLF6Q99612 283 aaPredicted RBP12.39□□□□□ -0.43
PDE6C-201ENST00000371447 C2orf40Q9H1Z8 148 aa12.39□□□□□ -0.43
PDE6C-201ENST00000371447 KIF9Q9HAQ2 790 aa12.39□□□□□ -0.43
PDE6C-201ENST00000371447 SNTG2Q9NY99 539 aa12.39□□□□□ -0.43
PDE6C-201ENST00000371447 DDX20Q9UHI6 824 aaKnown RBP12.39□□□□□ -0.43
PDE6C-201ENST00000371447 CPA4Q9UI42 421 aa12.39□□□□□ -0.43
PDE6C-201ENST00000371447 BTBD19C9JJ37 291 aa12.39□□□□□ -0.43
PDE6C-201ENST00000371447 C22orf31O95567 290 aa12.39□□□□□ -0.43
PDE6C-201ENST00000371447 CALB1P05937 261 aa12.39□□□□□ -0.43
PDE6C-201ENST00000371447 EIF3BP55884 814 aaKnown RBP12.39□□□□□ -0.43
PDE6C-201ENST00000371447 BASP1P80723 227 aaKnown RBP12.39□□□□□ -0.43
PDE6C-201ENST00000371447 C1QBPQ07021 282 aaKnown RBP12.39□□□□□ -0.43
PDE6C-201ENST00000371447 SLC10A6Q3KNW5 377 aa12.39□□□□□ -0.43
PDE6C-201ENST00000371447 SPOCD1Q6ZMY3 1216 aa12.39□□□□□ -0.43
PDE6C-201ENST00000371447 CCDC13Q8IYE1 715 aa12.39□□□□□ -0.43
PDE6C-201ENST00000371447 C18orf25Q96B23 403 aaPredicted RBP12.39□□□□□ -0.43
PDE6C-201ENST00000371447 SLITRK1Q96PX8 696 aa12.39□□□□□ -0.43
PDE6C-201ENST00000371447 XPO6Q96QU8 1125 aaKnown RBP12.39□□□□□ -0.43
PDE6C-201ENST00000371447 B3GNT5Q9BYG0 378 aa12.39□□□□□ -0.43
PDE6C-201ENST00000371447 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.39□□□□□ -0.43
PDE6C-201ENST00000371447 GOLGA8RI6L899 631 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 FAM107AO95990 144 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 RABGGTBP53611 331 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 CORO7P57737 925 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 ZNF200P98182 395 aaPredicted RBP12.38□□□□□ -0.43
PDE6C-201ENST00000371447 ARHGAP1Q07960 439 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 TMEM132DQ14C87 1099 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 FAM47EQ6ZV65 393 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 CATSPER4Q7RTX7 472 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 SCUBE3Q8IX30 993 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 LRRC34Q8IZ02 419 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 C4orf33Q8N1A6 199 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 CCDC89Q8N998 374 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 FAM71DQ8N9W8 422 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 OR6B3Q8NGW1 331 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 ACTL9Q8TC94 416 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 TMEM174Q8WUU8 243 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 ADPGKQ9BRR6 497 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 TXLNGYQ9BZA5 131 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.38□□□□□ -0.43
PDE6C-201ENST00000371447 NINJ2Q9NZG7 142 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 TMEM120BA0PK00 339 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 TP73O15350 636 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 MICAL2O94851 1124 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 TJP3O95049 919 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 CETPP11597 493 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 PECAM1P16284 738 aaPredicted RBP12.38□□□□□ -0.43
PDE6C-201ENST00000371447 ITIH2P19823 946 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 RAD23BP54727 409 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 GDF10P55107 478 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 PPIL2Q13356 520 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 CCDC142Q17RM4 750 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 C6orf118Q5T5N4 469 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 TSHZ1Q6ZSZ6 1077 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 EXOC3L1Q86VI1 746 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 GRK7Q8WTQ7 553 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 MAGEB5Q9BZ81 275 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 GOLGA2P5Q9HBQ8 144 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 NEU2Q9Y3R4 380 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 NR2E3Q9Y5X4 410 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 MRPL42Q9Y6G3 142 aaKnown RBP12.38□□□□□ -0.43
PDE6C-201ENST00000371447 DOCK1Q14185 1865 aa12.38□□□□□ -0.43
PDE6C-201ENST00000371447 LOC102724159A0A0B4J2E5 919 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 WDR91A4D1P6 747 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 ABLIM1O14639 778 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 BRAFP15056 766 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 KRT15P19012 456 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 ADORA2BP29275 332 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 OTUD4Q01804 1114 aaKnown RBP12.37□□□□□ -0.43
PDE6C-201ENST00000371447 PTPN11Q06124 597 aaPredicted RBP12.37□□□□□ -0.43
PDE6C-201ENST00000371447 PWP2Q15269 919 aaKnown RBP12.37□□□□□ -0.43
PDE6C-201ENST00000371447 CYP1B1Q16678 543 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 SPRED3Q2MJR0 410 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 FAM133BQ5BKY9 247 aaKnown RBP12.37□□□□□ -0.43
PDE6C-201ENST00000371447 AGBL2Q5U5Z8 902 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 CCDC121Q6ZUS5 278 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 PLPPR4Q7Z2D5 763 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 OR6J1Q8NGC5 347 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 RSAD2Q8WXG1 361 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 TRAIPQ9BWF2 469 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 FZD8Q9H461 694 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 PDZD7Q9H5P4 517 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 E5RJQ4 531 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 MEFVO15553 781 aaPredicted RBP12.37□□□□□ -0.43
PDE6C-201ENST00000371447 TRAPPC3O43617 180 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 IVDP26440 423 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 PDIA2Q13087 525 aaKnown RBP12.37□□□□□ -0.43
PDE6C-201ENST00000371447 BBS9Q3SYG4 887 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 CACNA2D3Q8IZS8 1091 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 EXD1Q8NHP7 514 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms