RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 PTPN7P35236 360 aa23.07■■□□□ 1.28
TM9SF3-201ENST00000371142 GLRA4Q5JXX5 417 aa23.07■■□□□ 1.28
TM9SF3-201ENST00000371142 ZNF677Q86XU0 584 aa23.07■■□□□ 1.28
TM9SF3-201ENST00000371142 ZNF512BQ96KM6 892 aaPredicted RBP23.07■■□□□ 1.28
TM9SF3-201ENST00000371142 GMPSP49915 693 aaPredicted RBP23.07■■□□□ 1.28
TM9SF3-201ENST00000371142 TRIP10Q15642 601 aa23.07■■□□□ 1.28
TM9SF3-201ENST00000371142 ARMC2Q8NEN0 867 aa23.07■■□□□ 1.28
TM9SF3-201ENST00000371142 GPRC5AQ8NFJ5 357 aa23.07■■□□□ 1.28
TM9SF3-201ENST00000371142 PLEKHA8Q96JA3 519 aa23.07■■□□□ 1.28
TM9SF3-201ENST00000371142 CCL15-CCL14A0A0B4J2E2 113 aa23.07■■□□□ 1.28
TM9SF3-201ENST00000371142 PPP1R3GB7ZBB8 358 aa23.07■■□□□ 1.28
TM9SF3-201ENST00000371142 SLC25A27O95847 323 aa23.07■■□□□ 1.28
TM9SF3-201ENST00000371142 LSP1P33241 339 aa23.07■■□□□ 1.28
TM9SF3-201ENST00000371142 CCL15Q16663 113 aa23.07■■□□□ 1.28
TM9SF3-201ENST00000371142 PPP1R2P1Q96PQ5 205 aa23.07■■□□□ 1.28
TM9SF3-201ENST00000371142 ISCUQ9H1K1 167 aa23.07■■□□□ 1.28
TM9SF3-201ENST00000371142 C16orf96A6NNT2 1141 aa23.06■■□□□ 1.28
TM9SF3-201ENST00000371142 ALDH1A3P47895 512 aa23.06■■□□□ 1.28
TM9SF3-201ENST00000371142 RPS6P62753 249 aaKnown RBP23.06■■□□□ 1.28
TM9SF3-201ENST00000371142 BTKQ06187 659 aa23.06■■□□□ 1.28
TM9SF3-201ENST00000371142 PTK6Q13882 451 aa23.06■■□□□ 1.28
TM9SF3-201ENST00000371142 ATP11BQ9Y2G3 1177 aa23.06■■□□□ 1.28
TM9SF3-201ENST00000371142 TAF6LQ9Y6J9 622 aa23.06■■□□□ 1.28
TM9SF3-201ENST00000371142 NBPF20Q3BBV1 942 aa23.06■■□□□ 1.28
TM9SF3-201ENST00000371142 RUSC1Q9BVN2 902 aa23.06■■□□□ 1.28
TM9SF3-201ENST00000371142 CINPQ9BW66 212 aaPredicted RBP23.06■■□□□ 1.28
TM9SF3-201ENST00000371142 DPP3Q9NY33 737 aa23.06■■□□□ 1.28
TM9SF3-201ENST00000371142 SLC37A4O43826 429 aa23.06■■□□□ 1.28
TM9SF3-201ENST00000371142 PLOD1Q02809 727 aaPredicted RBP23.06■■□□□ 1.28
TM9SF3-201ENST00000371142 SLC29A2Q14542 456 aa23.06■■□□□ 1.28
TM9SF3-201ENST00000371142 CROCC2H7BZ55 1655 aa23.06■■□□□ 1.28
TM9SF3-201ENST00000371142 PMPCBO75439 489 aa23.06■■□□□ 1.28
TM9SF3-201ENST00000371142 CTDNEP1O95476 244 aa23.06■■□□□ 1.28
TM9SF3-201ENST00000371142 GEMIN4P57678 1058 aaKnown RBP23.06■■□□□ 1.28
TM9SF3-201ENST00000371142 MRPL28Q13084 256 aaKnown RBP23.06■■□□□ 1.28
TM9SF3-201ENST00000371142 CCDC33Q8N5R6 958 aa23.06■■□□□ 1.28
TM9SF3-201ENST00000371142 ROPN1BQ9BZX4 212 aaPredicted RBP23.06■■□□□ 1.28
TM9SF3-201ENST00000371142 PPCSQ9HAB8 311 aa23.06■■□□□ 1.28
TM9SF3-201ENST00000371142 ROPN1Q9HAT0 212 aaPredicted RBP23.06■■□□□ 1.28
TM9SF3-201ENST00000371142 H2AFY2Q9P0M6 372 aaPredicted RBP23.06■■□□□ 1.28
TM9SF3-201ENST00000371142 KRT8P05787 483 aa23.06■■□□□ 1.28
TM9SF3-201ENST00000371142 RANBP1P43487 201 aa23.06■■□□□ 1.28
TM9SF3-201ENST00000371142 CTCFP49711 727 aaPredicted RBP23.06■■□□□ 1.28
TM9SF3-201ENST00000371142 POTEAQ6S8J7 498 aa23.06■■□□□ 1.28
TM9SF3-201ENST00000371142 DENND5BQ6ZUT9 1274 aa23.06■■□□□ 1.28
TM9SF3-201ENST00000371142 ANKS1AQ92625 1134 aa23.06■■□□□ 1.28
TM9SF3-201ENST00000371142 PRG3Q9Y2Y8 225 aaPredicted RBP23.06■■□□□ 1.28
TM9SF3-201ENST00000371142 PLEKP08567 350 aaPredicted RBP23.05■■□□□ 1.28
TM9SF3-201ENST00000371142 KRT16P08779 473 aa23.05■■□□□ 1.28
TM9SF3-201ENST00000371142 KCNA3P22001 575 aa23.05■■□□□ 1.28
TM9SF3-201ENST00000371142 SNRPFP62306 86 aaKnown RBP23.05■■□□□ 1.28
TM9SF3-201ENST00000371142 EPHB2P29323 1055 aa23.05■■□□□ 1.28
TM9SF3-201ENST00000371142 TAF6P49848 677 aa23.05■■□□□ 1.28
TM9SF3-201ENST00000371142 MRPS15P82914 257 aaKnown RBP23.05■■□□□ 1.28
TM9SF3-201ENST00000371142 NAPEPLDQ6IQ20 393 aa23.05■■□□□ 1.28
TM9SF3-201ENST00000371142 ACAD10Q6JQN1 1059 aa23.05■■□□□ 1.28
TM9SF3-201ENST00000371142 PPP2R3CQ969Q6 453 aa23.05■■□□□ 1.28
TM9SF3-201ENST00000371142 MKNK1Q9BUB5 465 aa23.05■■□□□ 1.28
TM9SF3-201ENST00000371142 NUMBP49757 651 aa23.05■■□□□ 1.28
TM9SF3-201ENST00000371142 SRLQ86TD4 932 aa23.05■■□□□ 1.28
TM9SF3-201ENST00000371142 NOA1Q8NC60 698 aaKnown RBP23.05■■□□□ 1.28
TM9SF3-201ENST00000371142 GID8Q9NWU2 228 aa23.05■■□□□ 1.28
TM9SF3-201ENST00000371142 M0QYT0 321 aa23.05■■□□□ 1.28
TM9SF3-201ENST00000371142 MAP3K6O95382 1288 aa23.05■■□□□ 1.28
TM9SF3-201ENST00000371142 POU4F1Q01851 419 aa23.05■■□□□ 1.28
TM9SF3-201ENST00000371142 PLEKHM3Q6ZWE6 761 aa23.05■■□□□ 1.28
TM9SF3-201ENST00000371142 SAMD7Q7Z3H4 446 aa23.05■■□□□ 1.28
TM9SF3-201ENST00000371142 CHST13Q8NET6 341 aa23.05■■□□□ 1.28
TM9SF3-201ENST00000371142 MDM1Q8TC05 714 aa23.05■■□□□ 1.28
TM9SF3-201ENST00000371142 CUL2Q13617 745 aa23.05■■□□□ 1.28
TM9SF3-201ENST00000371142 HES6Q96HZ4 224 aa23.05■■□□□ 1.28
TM9SF3-201ENST00000371142 CRLS1Q9UJA2 301 aa23.05■■□□□ 1.28
TM9SF3-201ENST00000371142 IMPDH2P12268 514 aa23.04■■□□□ 1.28
TM9SF3-201ENST00000371142 EPB42P16452 691 aa23.04■■□□□ 1.28
TM9SF3-201ENST00000371142 SEC24CP53992 1094 aa23.04■■□□□ 1.28
TM9SF3-201ENST00000371142 GNASQ5JWF2 1037 aa23.04■■□□□ 1.28
TM9SF3-201ENST00000371142 KIAA2013Q8IYS2 634 aa23.04■■□□□ 1.28
TM9SF3-201ENST00000371142 VPS50Q96JG6 964 aa23.04■■□□□ 1.28
TM9SF3-201ENST00000371142 AGPAT3Q9NRZ7 376 aa23.04■■□□□ 1.28
TM9SF3-201ENST00000371142 ANKEF1Q9NU02 776 aa23.04■■□□□ 1.28
TM9SF3-201ENST00000371142 CDC42BPBQ9Y5S2 1711 aa23.04■■□□□ 1.28
TM9SF3-201ENST00000371142 HEATR9A2RTY3 570 aa23.04■■□□□ 1.28
TM9SF3-201ENST00000371142 MSH4O15457 936 aa23.04■■□□□ 1.28
TM9SF3-201ENST00000371142 P4HA2O15460 535 aa23.04■■□□□ 1.28
TM9SF3-201ENST00000371142 SGPL1O95470 568 aa23.04■■□□□ 1.28
TM9SF3-201ENST00000371142 NTSR2O95665 410 aa23.04■■□□□ 1.28
TM9SF3-201ENST00000371142 HNRNPCP07910 306 aaKnown RBP eCLIP23.04■■□□□ 1.285e-6■■■■□ 22.3
TM9SF3-201ENST00000371142 CFAP99D6REC4 459 aa23.04■■□□□ 1.28
TM9SF3-201ENST00000371142 KIRREL3Q8IZU9 778 aa23.04■■□□□ 1.28
TM9SF3-201ENST00000371142 SPATA16Q9BXB7 569 aa23.04■■□□□ 1.28
TM9SF3-201ENST00000371142 CCDC134Q9H6E4 229 aa23.04■■□□□ 1.28
TM9SF3-201ENST00000371142 RIC8BQ9NVN3 520 aa23.04■■□□□ 1.28
TM9SF3-201ENST00000371142 CDY2AQ9Y6F7 541 aa23.04■■□□□ 1.28
TM9SF3-201ENST00000371142 CDY1Q9Y6F8 540 aa23.04■■□□□ 1.28
TM9SF3-201ENST00000371142 TMEM154Q6P9G4 183 aa23.04■■□□□ 1.28
TM9SF3-201ENST00000371142 FOXP3Q9BZS1 431 aa23.04■■□□□ 1.28
TM9SF3-201ENST00000371142 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.04■■□□□ 1.28
TM9SF3-201ENST00000371142 DTNAQ9Y4J8 743 aa23.04■■□□□ 1.28
TM9SF3-201ENST00000371142 DEAF1O75398 565 aaPredicted RBP23.04■■□□□ 1.28
TM9SF3-201ENST00000371142 PGK2P07205 417 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms