RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 ABRAQ8N0Z2 381 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 EIF1ADQ8N9N8 165 aaKnown RBP12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 MDM1Q8TC05 714 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 SLC20A1Q8WUM9 679 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 E2F7Q96AV8 911 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 CNPY3Q9BT09 278 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 MANSC1Q9H8J5 431 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 SIK3Q9Y2K2 1263 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 CCL15-CCL14A0A0B4J2E2 113 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 ENO1P06733 434 aaKnown RBP12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 PGM5Q15124 567 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 CCL15Q16663 113 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 SLC47A2Q86VL8 602 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 ELMOD1Q8N336 334 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 PRKCIP41743 596 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 AARSP49588 968 aaKnown RBP eCLIP12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 ALDH18A1P54886 795 aaKnown RBP12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 FOXR2Q6PJQ5 311 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 KCNK18Q7Z418 384 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 PRUNE1Q86TP1 453 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 CDR2LQ86X02 465 aaPredicted RBP12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 DCP1BQ8IZD4 617 aaKnown RBP12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 CMTM5Q96DZ9 223 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 SARS2Q9NP81 518 aaKnown RBP12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 BATF3Q9NR55 127 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 CISHQ9NSE2 258 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 CDY2AQ9Y6F7 541 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 CDY1Q9Y6F8 540 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 SHPRHQ149N8 1683 aa12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 ATRNO75882 1429 aa12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 TRIM49D1C9J1S8 452 aa12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 PFDN1O60925 122 aa12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 E2F6O75461 281 aa12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 NPTXRO95502 500 aa12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 GFAPP14136 432 aa12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 ATICP31939 592 aa12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 PTGER2P43116 358 aa12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 SLC12A3P55017 1021 aa12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 TGFB2P61812 414 aa12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 MAPRE1Q15691 268 aaKnown RBP12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 PDCD2Q16342 344 aaPredicted RBP12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 GLB1LQ6UWU2 654 aa12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 LRRC34Q8IZ02 419 aa12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 ARHGAP18Q8N392 663 aa12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 SLC7A14Q8TBB6 771 aa12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 NCLNQ969V3 563 aa12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 KLF6Q99612 283 aaPredicted RBP12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 CDC42EP4Q9H3Q1 356 aaKnown RBP12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 H3BQF6 201 aa12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 DDX3XO00571 662 aaKnown RBP eCLIP12.36□□□□□ -0.435e-20■■■■□ 25.7
DEPDC1-201ENST00000370966 PDHA1P08559 390 aa12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 TMEM62Q0P6H9 643 aa12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 DNAJC3Q13217 504 aa12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 SEZ6Q53EL9 994 aa12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 POP1Q99575 1024 aaKnown RBP12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 EGFL8Q99944 293 aa12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 ARHGEF38Q9NXL2 777 aa12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 PCDHGC5Q9Y5F6 944 aa12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 KLRC4O43908 158 aa12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 ITIH4Q14624 930 aa12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 SMAD1Q15797 465 aaKnown RBP12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 HABP4Q5JVS0 413 aaKnown RBP12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 SETD3Q86TU7 594 aaPredicted RBP12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 LCA5Q86VQ0 697 aa12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 TFB1MQ8WVM0 346 aaKnown RBP12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 KCNMB3Q9NPA1 279 aa12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 POLIQ9UNA4 740 aa12.36□□□□□ -0.43
DEPDC1-201ENST00000370966 CLCN3P51790 818 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 ABCE1P61221 599 aaKnown RBP12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 TBCCQ15814 346 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 ZNF662Q6ZS27 426 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 RNF168Q8IYW5 571 aaPredicted RBP12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 MTBPQ96DY7 904 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 OLFM3Q96PB7 478 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 ING2Q9H160 280 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 MRPL46Q9H2W6 279 aaKnown RBP12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 AVENQ9NQS1 362 aaPredicted RBP12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 SLC24A2Q9UI40 661 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 TADA2AO75478 443 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 F9P00740 461 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 CTSHP09668 335 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 FGRP09769 529 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 MCF2P10911 925 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 OTUD4Q01804 1114 aaKnown RBP12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 POTEAQ6S8J7 498 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 ZPBP2Q6X784 338 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 LINC00523Q86TU6 105 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 LONP2Q86WA8 852 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 CREG2Q8IUH2 290 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 MCOLN2Q8IZK6 566 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 AGR3Q8TD06 166 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 EPS8L3Q8TE67 593 aaKnown RBP12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 ZNF669Q96BR6 464 aaPredicted RBP12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 ZBED2Q9BTP6 218 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 OSBPL1AQ9BXW6 950 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 TASP1Q9H6P5 420 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 MARCOQ9UEW3 520 aaPredicted RBP12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 TMEM247A6NEH6 219 aa12.35□□□□□ -0.43
DEPDC1-201ENST00000370966 CAND2O75155 1236 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms