RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 AKAP3O75969 853 aa16.29■□□□□ 0.2
SS18L1-202ENST00000370848 TNNC2P02585 160 aa16.29■□□□□ 0.2
SS18L1-202ENST00000370848 TNNI1P19237 187 aa16.29■□□□□ 0.2
SS18L1-202ENST00000370848 TYMPP19971 482 aa16.29■□□□□ 0.2
SS18L1-202ENST00000370848 NR2F2P24468 414 aa16.29■□□□□ 0.2
SS18L1-202ENST00000370848 TARSP26639 723 aaKnown RBP16.29■□□□□ 0.2
SS18L1-202ENST00000370848 CDR1P51861 262 aa16.29■□□□□ 0.2
SS18L1-202ENST00000370848 DLG4P78352 724 aa16.29■□□□□ 0.2
SS18L1-202ENST00000370848 YWHAHQ04917 246 aaPredicted RBP16.29■□□□□ 0.2
SS18L1-202ENST00000370848 GPR17Q13304 367 aa16.29■□□□□ 0.2
SS18L1-202ENST00000370848 SURF1Q15526 300 aa16.29■□□□□ 0.2
SS18L1-202ENST00000370848 FAM78AQ5JUQ0 283 aa16.29■□□□□ 0.2
SS18L1-202ENST00000370848 PDZD4Q76G19 769 aaPredicted RBP16.29■□□□□ 0.2
SS18L1-202ENST00000370848 DEPDC1BQ8WUY9 529 aa16.29■□□□□ 0.2
SS18L1-202ENST00000370848 SMARCD2Q92925 531 aa16.29■□□□□ 0.2
SS18L1-202ENST00000370848 ZNF560Q96MR9 790 aa16.29■□□□□ 0.2
SS18L1-202ENST00000370848 CORO1BQ9BR76 489 aa16.29■□□□□ 0.2
SS18L1-202ENST00000370848 LMBRD1Q9NUN5 540 aa16.29■□□□□ 0.2
SS18L1-202ENST00000370848 PCDHGA2Q9Y5H1 932 aa16.29■□□□□ 0.2
SS18L1-202ENST00000370848 NUP210Q8TEM1 1887 aaPredicted RBP16.29■□□□□ 0.2
SS18L1-202ENST00000370848 OR6C75A6NL08 312 aa16.28■□□□□ 0.2
SS18L1-202ENST00000370848 FAM170BA6NMN3 283 aa16.28■□□□□ 0.2
SS18L1-202ENST00000370848 KPNA7A9QM74 516 aa16.28■□□□□ 0.2
SS18L1-202ENST00000370848 ODC1P11926 461 aa16.28■□□□□ 0.2
SS18L1-202ENST00000370848 RBP5P82980 135 aa16.28■□□□□ 0.2
SS18L1-202ENST00000370848 ADCY1Q08828 1119 aa16.28■□□□□ 0.2
SS18L1-202ENST00000370848 MYBPC2Q14324 1141 aa16.28■□□□□ 0.2
SS18L1-202ENST00000370848 NFIL3Q16649 462 aa16.28■□□□□ 0.2
SS18L1-202ENST00000370848 DUOXA2Q1HG44 320 aa16.28■□□□□ 0.2
SS18L1-202ENST00000370848 SV2CQ496J9 727 aa16.28■□□□□ 0.2
SS18L1-202ENST00000370848 WSCD1Q658N2 575 aa16.28■□□□□ 0.2
SS18L1-202ENST00000370848 OVOS1Q6IE37 1185 aa16.28■□□□□ 0.2
SS18L1-202ENST00000370848 ZNF852Q6ZMS4 543 aa16.28■□□□□ 0.2
SS18L1-202ENST00000370848 RNF19BQ6ZMZ0 732 aa16.28■□□□□ 0.2
SS18L1-202ENST00000370848 TPRG1Q6ZUI0 275 aa16.28■□□□□ 0.2
SS18L1-202ENST00000370848 TRAPPC11Q7Z392 1133 aa16.28■□□□□ 0.2
SS18L1-202ENST00000370848 TMC8Q8IU68 726 aa16.28■□□□□ 0.2
SS18L1-202ENST00000370848 OR10T2Q8NGX3 314 aa16.28■□□□□ 0.2
SS18L1-202ENST00000370848 PARD3BQ8TEW8 1205 aa16.28■□□□□ 0.2
SS18L1-202ENST00000370848 TMEM174Q8WUU8 243 aa16.28■□□□□ 0.2
SS18L1-202ENST00000370848 ELMO3Q96BJ8 720 aa16.28■□□□□ 0.2
SS18L1-202ENST00000370848 GPR88Q9GZN0 384 aa16.28■□□□□ 0.2
SS18L1-202ENST00000370848 ZFP14Q9HCL3 533 aa16.28■□□□□ 0.2
SS18L1-202ENST00000370848 MRPS17Q9Y2R5 130 aaKnown RBP16.28■□□□□ 0.2
SS18L1-202ENST00000370848 YIPF1Q9Y548 306 aa16.28■□□□□ 0.2
SS18L1-202ENST00000370848 SCN1AP35498 2009 aa16.28■□□□□ 0.2
SS18L1-202ENST00000370848 TICRRQ7Z2Z1 1910 aa16.27■□□□□ 0.2
SS18L1-202ENST00000370848 NCANO14594 1321 aa16.27■□□□□ 0.2
SS18L1-202ENST00000370848 MAN2B1O00754 1011 aa16.27■□□□□ 0.2
SS18L1-202ENST00000370848 NCAM2O15394 837 aa16.27■□□□□ 0.2
SS18L1-202ENST00000370848 CST3P01034 146 aaPredicted RBP16.27■□□□□ 0.2
SS18L1-202ENST00000370848 CYP11A1P05108 521 aa16.27■□□□□ 0.2
SS18L1-202ENST00000370848 TDGF1P13385 188 aa16.27■□□□□ 0.2
SS18L1-202ENST00000370848 PSMC3P17980 439 aa16.27■□□□□ 0.2
SS18L1-202ENST00000370848 WEE1P30291 646 aa16.27■□□□□ 0.2
SS18L1-202ENST00000370848 ID4P47928 161 aa16.27■□□□□ 0.2
SS18L1-202ENST00000370848 TWF1Q12792 350 aa16.27■□□□□ 0.2
SS18L1-202ENST00000370848 PLD1Q13393 1074 aa16.27■□□□□ 0.2
SS18L1-202ENST00000370848 MORC3Q14149 939 aa16.27■□□□□ 0.2
SS18L1-202ENST00000370848 UBXN2BQ14CS0 331 aa16.27■□□□□ 0.2
SS18L1-202ENST00000370848 COBLL1Q53SF7 1204 aa16.27■□□□□ 0.2
SS18L1-202ENST00000370848 C1orf220Q5T0J3 134 aa16.27■□□□□ 0.2
SS18L1-202ENST00000370848 CYP4A22Q5TCH4 519 aa16.27■□□□□ 0.2
SS18L1-202ENST00000370848 TDRD10Q5VZ19 366 aaKnown RBP16.27■□□□□ 0.2
SS18L1-202ENST00000370848 IQCEQ6IPM2 695 aa16.27■□□□□ 0.2
SS18L1-202ENST00000370848 VITQ6UXI7 678 aa16.27■□□□□ 0.2
SS18L1-202ENST00000370848 USP37Q86T82 979 aa16.27■□□□□ 0.2
SS18L1-202ENST00000370848 ELMOD1Q8N336 334 aa16.27■□□□□ 0.2
SS18L1-202ENST00000370848 LRRC52Q8N7C0 313 aa16.27■□□□□ 0.2
SS18L1-202ENST00000370848 RUBCNQ92622 972 aa16.27■□□□□ 0.2
SS18L1-202ENST00000370848 IRF7Q92985 503 aa16.27■□□□□ 0.2
SS18L1-202ENST00000370848 E2F7Q96AV8 911 aa16.27■□□□□ 0.2
SS18L1-202ENST00000370848 MSANTD3Q96H12 275 aa16.27■□□□□ 0.2
SS18L1-202ENST00000370848 ZNF512Q96ME7 567 aaPredicted RBP16.27■□□□□ 0.2
SS18L1-202ENST00000370848 FAM126AQ9BYI3 521 aaPredicted RBP16.27■□□□□ 0.2
SS18L1-202ENST00000370848 DNAJC25Q9H1X3 360 aa16.27■□□□□ 0.2
SS18L1-202ENST00000370848 CRISPLD1Q9H336 500 aa16.27■□□□□ 0.2
SS18L1-202ENST00000370848 ASAH2Q9NR71 780 aa16.27■□□□□ 0.2
SS18L1-202ENST00000370848 HEBP1Q9NRV9 189 aa16.27■□□□□ 0.2
SS18L1-202ENST00000370848 L1RE1Q9UN81 338 aa16.27■□□□□ 0.2
SS18L1-202ENST00000370848 LAMTOR5O43504 91 aa16.26■□□□□ 0.19
SS18L1-202ENST00000370848 HCRTO43612 131 aa16.26■□□□□ 0.19
SS18L1-202ENST00000370848 TRIM49P0CI25 452 aa16.26■□□□□ 0.19
SS18L1-202ENST00000370848 TRIM49CP0CI26 452 aa16.26■□□□□ 0.19
SS18L1-202ENST00000370848 CPB1P15086 417 aa16.26■□□□□ 0.19
SS18L1-202ENST00000370848 PNPLA4P41247 253 aa16.26■□□□□ 0.19
SS18L1-202ENST00000370848 FCHO2Q0JRZ9 810 aa16.26■□□□□ 0.19
SS18L1-202ENST00000370848 ADAM9Q13443 819 aa16.26■□□□□ 0.19
SS18L1-202ENST00000370848 ANKRD40Q6AI12 368 aa16.26■□□□□ 0.19
SS18L1-202ENST00000370848 CENPPQ6IPU0 288 aa16.26■□□□□ 0.19
SS18L1-202ENST00000370848 KLHL10Q6JEL2 608 aa16.26■□□□□ 0.19
SS18L1-202ENST00000370848 OSTM1Q86WC4 334 aa16.26■□□□□ 0.19
SS18L1-202ENST00000370848 MFSD6LQ8IWD5 586 aa16.26■□□□□ 0.19
SS18L1-202ENST00000370848 FAM186BQ8IYM0 893 aa16.26■□□□□ 0.19
SS18L1-202ENST00000370848 PDCL2Q8N4E4 241 aa16.26■□□□□ 0.19
SS18L1-202ENST00000370848 HPDLQ96IR7 371 aa16.26■□□□□ 0.19
SS18L1-202ENST00000370848 ZSWIM3Q96MP5 696 aa16.26■□□□□ 0.19
SS18L1-202ENST00000370848 PGLYRP2Q96PD5 576 aa16.26■□□□□ 0.19
SS18L1-202ENST00000370848 TRMT61BQ9BVS5 477 aaKnown RBP16.26■□□□□ 0.19
SS18L1-202ENST00000370848 EPC1Q9H2F5 836 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms