RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 SPATA2LQ8IUW3 424 aaPredicted RBP15.84■□□□□ 0.13
COL9A1-204ENST00000370496 ATAD1Q8NBU5 361 aa15.84■□□□□ 0.13
COL9A1-204ENST00000370496 SUSD6Q92537 303 aa15.84■□□□□ 0.13
COL9A1-204ENST00000370496 MYLPFQ96A32 169 aa15.84■□□□□ 0.13
COL9A1-204ENST00000370496 ZNF707Q96C28 371 aaPredicted RBP15.84■□□□□ 0.13
COL9A1-204ENST00000370496 NT5C1BQ96P26 610 aa15.84■□□□□ 0.13
COL9A1-204ENST00000370496 PRKD2Q9BZL6 878 aa15.84■□□□□ 0.13
COL9A1-204ENST00000370496 CYP3A43Q9HB55 503 aa15.84■□□□□ 0.13
COL9A1-204ENST00000370496 GCNT4Q9P109 453 aa15.84■□□□□ 0.13
COL9A1-204ENST00000370496 PTPRDP23468 1912 aa15.83■□□□□ 0.13
COL9A1-204ENST00000370496 CLUHO75153 1309 aa15.83■□□□□ 0.12
COL9A1-204ENST00000370496 PMM2O15305 246 aa15.83■□□□□ 0.12
COL9A1-204ENST00000370496 VNN2O95498 520 aa15.83■□□□□ 0.12
COL9A1-204ENST00000370496 TPM2P07951 284 aa15.83■□□□□ 0.12
COL9A1-204ENST00000370496 ALDH1A3P47895 512 aa15.83■□□□□ 0.12
COL9A1-204ENST00000370496 CYP27A1Q02318 531 aa15.83■□□□□ 0.12
COL9A1-204ENST00000370496 TWF1Q12792 350 aa15.83■□□□□ 0.12
COL9A1-204ENST00000370496 TCP11X2Q5H9J9 407 aa15.83■□□□□ 0.12
COL9A1-204ENST00000370496 LRRTM3Q86VH5 581 aa15.83■□□□□ 0.12
COL9A1-204ENST00000370496 TTC9BQ8N6N2 239 aa15.83■□□□□ 0.12
COL9A1-204ENST00000370496 B3GALNT2Q8NCR0 500 aa15.83■□□□□ 0.12
COL9A1-204ENST00000370496 ANKRD20A12PQ8NF67 263 aa15.83■□□□□ 0.12
COL9A1-204ENST00000370496 TNIP3Q96KP6 325 aa15.83■□□□□ 0.12
COL9A1-204ENST00000370496 TUBGCP2Q9BSJ2 902 aa15.83■□□□□ 0.12
COL9A1-204ENST00000370496 DNAI2Q9GZS0 605 aa15.83■□□□□ 0.12
COL9A1-204ENST00000370496 CRISPLD1Q9H336 500 aa15.83■□□□□ 0.12
COL9A1-204ENST00000370496 DPEP3Q9H4B8 488 aa15.83■□□□□ 0.12
COL9A1-204ENST00000370496 POMKQ9H5K3 350 aa15.83■□□□□ 0.12
COL9A1-204ENST00000370496 TMLHEQ9NVH6 421 aa15.83■□□□□ 0.12
COL9A1-204ENST00000370496 HMGXB4Q9UGU5 601 aa15.83■□□□□ 0.12
COL9A1-204ENST00000370496 GTF3C4Q9UKN8 822 aa15.83■□□□□ 0.12
COL9A1-204ENST00000370496 SLC27A5Q9Y2P5 690 aa15.83■□□□□ 0.12
COL9A1-204ENST00000370496 MYBPHLA2RUH7 354 aa15.82■□□□□ 0.12
COL9A1-204ENST00000370496 ATP2C2O75185 946 aa15.82■□□□□ 0.12
COL9A1-204ENST00000370496 POU2F2P09086 479 aa15.82■□□□□ 0.12
COL9A1-204ENST00000370496 TBXAS1P24557 533 aaPredicted RBP15.82■□□□□ 0.12
COL9A1-204ENST00000370496 NDST1P52848 882 aa15.82■□□□□ 0.12
COL9A1-204ENST00000370496 INCA1Q0VD86 236 aa15.82■□□□□ 0.12
COL9A1-204ENST00000370496 ORC1Q13415 861 aa15.82■□□□□ 0.12
COL9A1-204ENST00000370496 CUL2Q13617 745 aa15.82■□□□□ 0.12
COL9A1-204ENST00000370496 CDKAL1Q5VV42 579 aa15.82■□□□□ 0.12
COL9A1-204ENST00000370496 PPM1KQ8N3J5 372 aa15.82■□□□□ 0.12
COL9A1-204ENST00000370496 TTC39CQ8N584 583 aa15.82■□□□□ 0.12
COL9A1-204ENST00000370496 FEZF2Q8TBJ5 459 aa15.82■□□□□ 0.12
COL9A1-204ENST00000370496 MYCBPAPQ8TBZ2 947 aa15.82■□□□□ 0.12
COL9A1-204ENST00000370496 FAM200AQ8TCP9 573 aa15.82■□□□□ 0.12
COL9A1-204ENST00000370496 FAXDC2Q96IV6 333 aa15.82■□□□□ 0.12
COL9A1-204ENST00000370496 PKMYT1Q99640 499 aa15.82■□□□□ 0.12
COL9A1-204ENST00000370496 ARID3AQ99856 593 aa15.82■□□□□ 0.12
COL9A1-204ENST00000370496 BPIFA3Q9BQP9 254 aa15.82■□□□□ 0.12
COL9A1-204ENST00000370496 RHOBTB2Q9BYZ6 727 aa15.82■□□□□ 0.12
COL9A1-204ENST00000370496 INTS2Q9H0H0 1204 aaKnown RBP15.82■□□□□ 0.12
COL9A1-204ENST00000370496 ABCB6Q9NP58 842 aa15.82■□□□□ 0.12
COL9A1-204ENST00000370496 CRTAC1Q9NQ79 661 aa15.82■□□□□ 0.12
COL9A1-204ENST00000370496 HSFX1Q9UBD0 423 aa15.82■□□□□ 0.12
COL9A1-204ENST00000370496 NME7Q9Y5B8 376 aa15.82■□□□□ 0.12
COL9A1-204ENST00000370496 ATP8B3O60423 1300 aa15.81■□□□□ 0.12
COL9A1-204ENST00000370496 SOAT2O75908 522 aa15.81■□□□□ 0.12
COL9A1-204ENST00000370496 SP100P23497 879 aaPredicted RBP15.81■□□□□ 0.12
COL9A1-204ENST00000370496 TUFMP49411 452 aaKnown RBP15.81■□□□□ 0.12
COL9A1-204ENST00000370496 ZNF165P49910 485 aa15.81■□□□□ 0.12
COL9A1-204ENST00000370496 EPHB3P54753 998 aa15.81■□□□□ 0.12
COL9A1-204ENST00000370496 YWHAEP62258 255 aaKnown RBP15.81■□□□□ 0.12
COL9A1-204ENST00000370496 VEPH1Q14D04 833 aa15.81■□□□□ 0.12
COL9A1-204ENST00000370496 VWA3BQ502W6 1294 aa15.81■□□□□ 0.12
COL9A1-204ENST00000370496 IQCEQ6IPM2 695 aa15.81■□□□□ 0.12
COL9A1-204ENST00000370496 GBP6Q6ZN66 633 aa15.81■□□□□ 0.12
COL9A1-204ENST00000370496 UNC93AQ86WB7 457 aa15.81■□□□□ 0.12
COL9A1-204ENST00000370496 ADAMTS19Q8TE59 1207 aa15.81■□□□□ 0.12
COL9A1-204ENST00000370496 TATDN2Q93075 761 aa15.81■□□□□ 0.12
COL9A1-204ENST00000370496 PCED1BQ96HM7 432 aa15.81■□□□□ 0.12
COL9A1-204ENST00000370496 FUBP3Q96I24 572 aaKnown RBP eCLIP15.81■□□□□ 0.12
COL9A1-204ENST00000370496 FUCA2Q9BTY2 467 aa15.81■□□□□ 0.12
COL9A1-204ENST00000370496 NT5C1AQ9BXI3 368 aa15.81■□□□□ 0.12
COL9A1-204ENST00000370496 FANCLQ9NW38 375 aa15.81■□□□□ 0.12
COL9A1-204ENST00000370496 TAB2Q9NYJ8 693 aa15.81■□□□□ 0.12
COL9A1-204ENST00000370496 C5orf42Q9H799 3197 aa15.8■□□□□ 0.12
COL9A1-204ENST00000370496 BECN2A8MW95 431 aa15.8■□□□□ 0.12
COL9A1-204ENST00000370496 CILPO75339 1184 aa15.8■□□□□ 0.12
COL9A1-204ENST00000370496 PAPLNO95428 1278 aa15.8■□□□□ 0.12
COL9A1-204ENST00000370496 BMP1P13497 986 aa15.8■□□□□ 0.12
COL9A1-204ENST00000370496 PTPN1P18031 435 aaKnown RBP15.8■□□□□ 0.12
COL9A1-204ENST00000370496 EXOC3L4Q17RC7 722 aa15.8■□□□□ 0.12
COL9A1-204ENST00000370496 CFAP221Q4G0U5 840 aa15.8■□□□□ 0.12
COL9A1-204ENST00000370496 PABPC1LQ4VXU2 614 aaKnown RBP15.8■□□□□ 0.12
COL9A1-204ENST00000370496 FAM171BQ6P995 826 aa15.8■□□□□ 0.12
COL9A1-204ENST00000370496 GET4Q7L5D6 327 aaPredicted RBP15.8■□□□□ 0.12
COL9A1-204ENST00000370496 GRASPQ7Z6J2 395 aaPredicted RBP15.8■□□□□ 0.12
COL9A1-204ENST00000370496 ACOT1Q86TX2 421 aa15.8■□□□□ 0.12
COL9A1-204ENST00000370496 CORO1BQ9BR76 489 aa15.8■□□□□ 0.12
COL9A1-204ENST00000370496 CRACR2AQ9BSW2 395 aa15.8■□□□□ 0.12
COL9A1-204ENST00000370496 MED10Q9BTT4 135 aa15.8■□□□□ 0.12
COL9A1-204ENST00000370496 PHF7Q9BWX1 381 aaPredicted RBP15.8■□□□□ 0.12
COL9A1-204ENST00000370496 NDST4Q9H3R1 872 aa15.8■□□□□ 0.12
COL9A1-204ENST00000370496 WDR6Q9NNW5 1121 aaKnown RBP15.8■□□□□ 0.12
COL9A1-204ENST00000370496 CISHQ9NSE2 258 aa15.8■□□□□ 0.12
COL9A1-204ENST00000370496 HCFC1R1Q9NWW0 138 aa15.8■□□□□ 0.12
COL9A1-204ENST00000370496 PRKAG3Q9UGI9 489 aa15.8■□□□□ 0.12
COL9A1-204ENST00000370496 GTPBP10A4D1E9 387 aaKnown RBP15.79■□□□□ 0.12
COL9A1-204ENST00000370496 SMTNL1A8MU46 457 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms