RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 TRIM72Q6ZMU5 477 aa10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 APBB1IPQ7Z5R6 666 aaPredicted RBP10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 ANKRD42Q8N9B4 389 aa10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 RBBP8NLQ8NC74 664 aaPredicted RBP10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 MRRFQ96E11 262 aaKnown RBP10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 TRIM11Q96F44 468 aa10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 HES6Q96HZ4 224 aa10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 PDZD7Q9H5P4 517 aa10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 TMEM165Q9HC07 324 aa10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 COG5Q9UP83 839 aa10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 TLL2Q9Y6L7 1015 aa10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 DNAJC8O75937 253 aaPredicted RBP10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 F2P00734 622 aa10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 SMIM10L2AP0DMW4 78 aa10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 SMIM10L2BP0DMW5 78 aa10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 ATP2A2P16615 1042 aaKnown RBP10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 GNA15P30679 374 aa10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 TNNC1P63316 161 aa10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 IFI35P80217 286 aaPredicted RBP10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 ZNF699Q32M78 642 aa10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 C11orf63Q6NUN7 778 aa10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 TEKT4Q8WW24 435 aa10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 TRIM51Q9BSJ1 452 aa10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 DDX23Q9BUQ8 820 aaKnown RBP10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 GCOM2Q9BZD3 368 aaPredicted RBP10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 NIF3L1Q9GZT8 377 aa10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 FAM49AQ9H0Q0 323 aaPredicted RBP10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 INTS9Q9NV88 658 aaKnown RBP10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 UVRAGQ9P2Y5 699 aa10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 ABT1Q9ULW3 272 aaKnown RBP10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 Q9Y3F1 56 aa10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 TTI1O43156 1089 aa10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 CYP1A2P05177 515 aa10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 NQO1P15559 274 aaKnown RBP10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 YWHAEP62258 255 aaKnown RBP10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 MFSD10Q14728 455 aa10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 ZC3H12AQ5D1E8 599 aaKnown RBP10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 PPP1R2P3Q6NXS1 205 aa10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 PHLDB2Q86SQ0 1253 aa10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 ACTRT1Q8TDG2 376 aa10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 ASB7Q9H672 318 aa10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 GJD2Q9UKL4 321 aa10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 CNTN6Q9UQ52 1028 aa10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 ALG6Q9Y672 507 aa10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 UMODL1Q5DID0 1318 aa10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 LRRD1A4D1F6 860 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 SART1O43290 800 aaKnown RBP10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 MTA2O94776 668 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 MYL3P08590 195 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 KRT19P08727 400 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 NSFP46459 744 aaKnown RBP10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 SCNN1BP51168 640 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 CRHR2Q13324 411 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 PPP1R15BQ5SWA1 713 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 USP38Q8NB14 1042 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 GDAP1Q8TB36 358 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 ZNF564Q8TBZ8 553 aaPredicted RBP10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 RUBCNQ92622 972 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 LRRC45Q96CN5 670 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 NUP85Q9BW27 656 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 KDM4CQ9H3R0 1056 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 GINS2Q9Y248 185 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 LACTBL1A8MY62 500 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 MIF4GDA9UHW6 222 aaKnown RBP10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 PGRMC1O00264 195 aaKnown RBP10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 KRIT1O00522 736 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 THAP12O43422 761 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 TSPAN1O60635 241 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 CALCAP01258 141 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 CYP2C9P11712 490 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 PSEN2P49810 448 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 ATP11AP98196 1134 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 MESDQ14696 234 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 KIZQ2M2Z5 673 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 SMYD5Q6GMV2 418 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 TMEM192Q8IY95 271 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 MAGEC3Q8TD91 643 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 NAF1Q96HR8 494 aaKnown RBP10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 FGFR1OP2Q9NVK5 253 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 DLGAP2Q9P1A6 1054 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 C2CD2Q9Y426 696 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 PASKQ96RG2 1323 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 SMIM35A0A1B0GVV1 85 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 UNGP13051 313 aaPredicted RBP10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 UBAP2Q5T6F2 1119 aaKnown RBP10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 UBL4BQ8N7F7 174 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 ACAP3Q96P50 834 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 RPS6KC1Q96S38 1066 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 EPAS1Q99814 870 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.54□□□□□ -0.727e-8■■■□□ 19.2
PRPF38B-203ENST00000370025 KATNAL1Q9BW62 490 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 TRIM4Q9C037 500 aa10.54□□□□□ -0.72
PRPF38B-203ENST00000370025 ATMINO43313 823 aaPredicted RBP10.53□□□□□ -0.72
PRPF38B-203ENST00000370025 VPS41P49754 854 aa10.53□□□□□ -0.72
PRPF38B-203ENST00000370025 LACTBP83111 547 aaPredicted RBP10.53□□□□□ -0.72
PRPF38B-203ENST00000370025 LIN9Q5TKA1 542 aa10.53□□□□□ -0.72
PRPF38B-203ENST00000370025 TMEM154Q6P9G4 183 aa10.53□□□□□ -0.72
PRPF38B-203ENST00000370025 TRIM74Q86UV6 250 aa10.53□□□□□ -0.72
PRPF38B-203ENST00000370025 TRIM73Q86UV7 250 aa10.53□□□□□ -0.72
PRPF38B-203ENST00000370025 CPA5Q8WXQ8 436 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms