RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 TMLHEQ9NVH6 421 aa19.94■□□□□ 0.78
LMNA-204ENST00000368298 GTF3C4Q9UKN8 822 aa19.94■□□□□ 0.78
LMNA-204ENST00000368298 FAM50BQ9Y247 325 aa19.94■□□□□ 0.78
LMNA-204ENST00000368298 USP15Q9Y4E8 981 aaPredicted RBP19.94■□□□□ 0.78
LMNA-204ENST00000368298 LRRC10BA6NIK2 292 aa19.93■□□□□ 0.78
LMNA-204ENST00000368298 A8MXQ7 604 aa19.93■□□□□ 0.78
LMNA-204ENST00000368298 ADCY5O95622 1261 aa19.93■□□□□ 0.78
LMNA-204ENST00000368298 WEE2P0C1S8 567 aa19.93■□□□□ 0.78
LMNA-204ENST00000368298 BMP1P13497 986 aa19.93■□□□□ 0.78
LMNA-204ENST00000368298 RAP1GAPP47736 663 aa19.93■□□□□ 0.78
LMNA-204ENST00000368298 SMAD2Q15796 467 aaKnown RBP19.93■□□□□ 0.78
LMNA-204ENST00000368298 CLUL1Q15846 466 aa19.93■□□□□ 0.78
LMNA-204ENST00000368298 VWA3BQ502W6 1294 aa19.93■□□□□ 0.78
LMNA-204ENST00000368298 HSP90AA4PQ58FG1 418 aa19.93■□□□□ 0.78
LMNA-204ENST00000368298 PTCRAQ6ISU1 281 aaPredicted RBP19.93■□□□□ 0.78
LMNA-204ENST00000368298 TMC5Q6UXY8 1006 aa19.93■□□□□ 0.78
LMNA-204ENST00000368298 SCARA5Q6ZMJ2 495 aa19.93■□□□□ 0.78
LMNA-204ENST00000368298 DHX40Q8IX18 779 aaKnown RBP19.93■□□□□ 0.78
LMNA-204ENST00000368298 CRYBG2Q8N1P7 616 aa19.93■□□□□ 0.78
LMNA-204ENST00000368298 ATAD1Q8NBU5 361 aa19.93■□□□□ 0.78
LMNA-204ENST00000368298 PGLYRP2Q96PD5 576 aa19.93■□□□□ 0.78
LMNA-204ENST00000368298 CRISPLD1Q9H336 500 aa19.93■□□□□ 0.78
LMNA-204ENST00000368298 CRTAC1Q9NQ79 661 aa19.93■□□□□ 0.78
LMNA-204ENST00000368298 INSL5Q9Y5Q6 135 aa19.93■□□□□ 0.78
LMNA-204ENST00000368298 MYBPHLA2RUH7 354 aa19.92■□□□□ 0.78
LMNA-204ENST00000368298 PRRG1O14668 218 aa19.92■□□□□ 0.78
LMNA-204ENST00000368298 ATP2C2O75185 946 aa19.92■□□□□ 0.78
LMNA-204ENST00000368298 PDGFRBP09619 1106 aa19.92■□□□□ 0.78
LMNA-204ENST00000368298 PTPN1P18031 435 aaKnown RBP19.92■□□□□ 0.78
LMNA-204ENST00000368298 KCNQ1P51787 676 aa19.92■□□□□ 0.78
LMNA-204ENST00000368298 PLCB2Q00722 1185 aa19.92■□□□□ 0.78
LMNA-204ENST00000368298 DUSP4Q13115 394 aa19.92■□□□□ 0.78
LMNA-204ENST00000368298 IQCB1Q15051 598 aa19.92■□□□□ 0.78
LMNA-204ENST00000368298 CFAP221Q4G0U5 840 aa19.92■□□□□ 0.78
LMNA-204ENST00000368298 AOPEPQ8N6M6 819 aa19.92■□□□□ 0.78
LMNA-204ENST00000368298 MYCBPAPQ8TBZ2 947 aa19.92■□□□□ 0.78
LMNA-204ENST00000368298 FUBP3Q96I24 572 aaKnown RBP eCLIP19.92■□□□□ 0.78
LMNA-204ENST00000368298 TNIP3Q96KP6 325 aa19.92■□□□□ 0.78
LMNA-204ENST00000368298 RIPOR3Q96MK2 946 aa19.92■□□□□ 0.78
LMNA-204ENST00000368298 NECTIN4Q96NY8 510 aa19.92■□□□□ 0.78
LMNA-204ENST00000368298 COL25A1Q9BXS0 654 aaPredicted RBP19.92■□□□□ 0.78
LMNA-204ENST00000368298 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.92■□□□□ 0.782e-7■■■■■ 30.8
LMNA-204ENST00000368298 PCDHB5Q9Y5E4 795 aa19.92■□□□□ 0.78
LMNA-204ENST00000368298 VCANP13611 3396 aa19.92■□□□□ 0.78
LMNA-204ENST00000368298 C2orf16Q68DN1 1984 aa19.92■□□□□ 0.78
LMNA-204ENST00000368298 SPDYE4A6NLX3 237 aa19.92■□□□□ 0.78
LMNA-204ENST00000368298 SMTNL1A8MU46 457 aa19.92■□□□□ 0.78
LMNA-204ENST00000368298 AP5Z1O43299 807 aa19.92■□□□□ 0.78
LMNA-204ENST00000368298 CILPO75339 1184 aa19.92■□□□□ 0.78
LMNA-204ENST00000368298 CLSTN1O94985 981 aa19.92■□□□□ 0.78
LMNA-204ENST00000368298 TBXAS1P24557 533 aaPredicted RBP19.92■□□□□ 0.78
LMNA-204ENST00000368298 MTHFRP42898 656 aa19.92■□□□□ 0.78
LMNA-204ENST00000368298 TUFMP49411 452 aaKnown RBP19.92■□□□□ 0.78
LMNA-204ENST00000368298 CUL2Q13617 745 aa19.92■□□□□ 0.78
LMNA-204ENST00000368298 ATAT1Q5SQI0 421 aa19.92■□□□□ 0.78
LMNA-204ENST00000368298 B3GALNT2Q8NCR0 500 aa19.92■□□□□ 0.78
LMNA-204ENST00000368298 WHAMMQ8TF30 809 aa19.92■□□□□ 0.78
LMNA-204ENST00000368298 NT5C1BQ96P26 610 aa19.92■□□□□ 0.78
LMNA-204ENST00000368298 APOL5Q9BWW9 433 aa19.92■□□□□ 0.78
LMNA-204ENST00000368298 LIMA1Q9UHB6 759 aaKnown RBP19.92■□□□□ 0.78
LMNA-204ENST00000368298 XYLBO75191 536 aa19.91■□□□□ 0.78
LMNA-204ENST00000368298 HAPLN1P10915 354 aaPredicted RBP19.91■□□□□ 0.78
LMNA-204ENST00000368298 NDST1P52848 882 aa19.91■□□□□ 0.78
LMNA-204ENST00000368298 GCNT1Q02742 428 aa19.91■□□□□ 0.78
LMNA-204ENST00000368298 CBX2Q14781 532 aaPredicted RBP19.91■□□□□ 0.78
LMNA-204ENST00000368298 KRT31Q15323 416 aa19.91■□□□□ 0.78
LMNA-204ENST00000368298 SMYD5Q6GMV2 418 aa19.91■□□□□ 0.78
LMNA-204ENST00000368298 GBP6Q6ZN66 633 aa19.91■□□□□ 0.78
LMNA-204ENST00000368298 C4orf50Q6ZRC1 276 aa19.91■□□□□ 0.78
LMNA-204ENST00000368298 FEZF2Q8TBJ5 459 aa19.91■□□□□ 0.78
LMNA-204ENST00000368298 SMG7Q92540 1137 aaKnown RBP19.91■□□□□ 0.78
LMNA-204ENST00000368298 INTS2Q9H0H0 1204 aaKnown RBP19.91■□□□□ 0.78
LMNA-204ENST00000368298 DPEP3Q9H4B8 488 aa19.91■□□□□ 0.78
LMNA-204ENST00000368298 GOLGA6L19H0YKK7 550 aa19.9■□□□□ 0.78
LMNA-204ENST00000368298 LRG1P02750 347 aa19.9■□□□□ 0.78
LMNA-204ENST00000368298 MAGEA11P43364 429 aa19.9■□□□□ 0.78
LMNA-204ENST00000368298 PSMC1P62191 440 aaKnown RBP19.9■□□□□ 0.78
LMNA-204ENST00000368298 PLD1Q13393 1074 aa19.9■□□□□ 0.78
LMNA-204ENST00000368298 EXOC3L4Q17RC7 722 aa19.9■□□□□ 0.78
LMNA-204ENST00000368298 TRIM65Q6PJ69 517 aa19.9■□□□□ 0.78
LMNA-204ENST00000368298 TTC9BQ8N6N2 239 aa19.9■□□□□ 0.78
LMNA-204ENST00000368298 UBR7Q8N806 425 aa19.9■□□□□ 0.78
LMNA-204ENST00000368298 PCED1BQ96HM7 432 aa19.9■□□□□ 0.78
LMNA-204ENST00000368298 ARID3AQ99856 593 aa19.9■□□□□ 0.78
LMNA-204ENST00000368298 CISHQ9NSE2 258 aa19.9■□□□□ 0.78
LMNA-204ENST00000368298 ABI2Q9NYB9 513 aaPredicted RBP19.9■□□□□ 0.78
LMNA-204ENST00000368298 GCNT4Q9P109 453 aa19.9■□□□□ 0.78
LMNA-204ENST00000368298 SLC27A5Q9Y2P5 690 aa19.9■□□□□ 0.78
LMNA-204ENST00000368298 YIPF1Q9Y548 306 aa19.9■□□□□ 0.78
LMNA-204ENST00000368298 PON1P27169 355 aa19.89■□□□□ 0.77
LMNA-204ENST00000368298 YWHAEP62258 255 aaKnown RBP19.89■□□□□ 0.77
LMNA-204ENST00000368298 LRMPQ12912 555 aa19.89■□□□□ 0.77
LMNA-204ENST00000368298 CCDC142Q17RM4 750 aa19.89■□□□□ 0.77
LMNA-204ENST00000368298 HS1BP3Q53T59 392 aa19.89■□□□□ 0.77
LMNA-204ENST00000368298 TJAP1Q5JTD0 557 aa19.89■□□□□ 0.77
LMNA-204ENST00000368298 PHLDB3Q6NSJ2 640 aa19.89■□□□□ 0.77
LMNA-204ENST00000368298 APTXQ7Z2E3 356 aaKnown RBP19.89■□□□□ 0.77
LMNA-204ENST00000368298 SPATA2LQ8IUW3 424 aaPredicted RBP19.89■□□□□ 0.77
LMNA-204ENST00000368298 JAKMIP2Q96AA8 810 aa19.89■□□□□ 0.77
LMNA-204ENST00000368298 NT5C1AQ9BXI3 368 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms