RNA–Protein interactions for RNA: ENST00000367364.5

PTPRC-202, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-202ENST00000367364 NELL2Q99435 816 aa5.38□□□□□ -1.55
PTPRC-202ENST00000367364 SCAF8Q9UPN6 1271 aaKnown RBP5.38□□□□□ -1.55
PTPRC-202ENST00000367364 IL6RP08887 468 aaPredicted RBP5.37□□□□□ -1.55
PTPRC-202ENST00000367364 TMEM191BP0C7N4 346 aa5.37□□□□□ -1.55
PTPRC-202ENST00000367364 AGXTP21549 392 aa5.37□□□□□ -1.55
PTPRC-202ENST00000367364 KRTAP5-9P26371 169 aa5.37□□□□□ -1.55
PTPRC-202ENST00000367364 IL1R2P27930 398 aa5.37□□□□□ -1.55
PTPRC-202ENST00000367364 SEMA3AQ14563 771 aa5.37□□□□□ -1.55
PTPRC-202ENST00000367364 FCRL6Q6DN72 434 aa5.37□□□□□ -1.55
PTPRC-202ENST00000367364 DTX2Q86UW9 622 aa5.37□□□□□ -1.55
PTPRC-202ENST00000367364 CTAGE1Q96RT6 745 aa5.37□□□□□ -1.55
PTPRC-202ENST00000367364 FSD1LQ9BXM9 530 aa5.37□□□□□ -1.55
PTPRC-202ENST00000367364 FAM90A8PA6NJQ4 464 aa5.36□□□□□ -1.55
PTPRC-202ENST00000367364 SOAT2O75908 522 aa5.36□□□□□ -1.55
PTPRC-202ENST00000367364 FAM90A13PP0C7W8 464 aa5.36□□□□□ -1.55
PTPRC-202ENST00000367364 FAM90A24PP0C7X0 464 aa5.36□□□□□ -1.55
PTPRC-202ENST00000367364 ITGALP20701 1170 aa5.36□□□□□ -1.55
PTPRC-202ENST00000367364 PDSS2Q86YH6 399 aa5.36□□□□□ -1.55
PTPRC-202ENST00000367364 PPM1NQ8N819 430 aa5.36□□□□□ -1.55
PTPRC-202ENST00000367364 DMRTA2Q96SC8 542 aa5.36□□□□□ -1.55
PTPRC-202ENST00000367364 SMAD6O43541 496 aaKnown RBP5.35□□□□□ -1.55
PTPRC-202ENST00000367364 SGTAO43765 313 aa5.35□□□□□ -1.55
PTPRC-202ENST00000367364 ABLIM3O94929 683 aa5.35□□□□□ -1.55
PTPRC-202ENST00000367364 CYP2A6P11509 494 aaPredicted RBP5.35□□□□□ -1.55
PTPRC-202ENST00000367364 KRTAP10-5P60370 271 aa5.35□□□□□ -1.55
PTPRC-202ENST00000367364 PSMC1P62191 440 aaKnown RBP5.35□□□□□ -1.55
PTPRC-202ENST00000367364 HABP2Q14520 560 aaPredicted RBP5.35□□□□□ -1.55
PTPRC-202ENST00000367364 TREML2Q5T2D2 321 aa5.35□□□□□ -1.55
PTPRC-202ENST00000367364 C10orf25Q5T742 122 aa5.35□□□□□ -1.55
PTPRC-202ENST00000367364 MIGA2Q7L4E1 593 aa5.35□□□□□ -1.55
PTPRC-202ENST00000367364 AHCYL2Q96HN2 611 aaKnown RBP5.35□□□□□ -1.55
PTPRC-202ENST00000367364 ADAMTS5Q9UNA0 930 aa5.35□□□□□ -1.55
PTPRC-202ENST00000367364 AGAP1Q9UPQ3 857 aa5.35□□□□□ -1.55
PTPRC-202ENST00000367364 ZNF785A8K8V0 405 aa5.34□□□□□ -1.55
PTPRC-202ENST00000367364 PRSS44E7EML9 344 aa5.34□□□□□ -1.55
PTPRC-202ENST00000367364 H7C1Q1 480 aa5.34□□□□□ -1.55
PTPRC-202ENST00000367364 SLC16A3O15427 465 aaKnown RBP5.34□□□□□ -1.55
PTPRC-202ENST00000367364 KRT86O43790 486 aa5.34□□□□□ -1.55
PTPRC-202ENST00000367364 VPS4BO75351 444 aa5.34□□□□□ -1.55
PTPRC-202ENST00000367364 MT3P25713 68 aa5.34□□□□□ -1.55
PTPRC-202ENST00000367364 HOXD9P28356 352 aaPredicted RBP5.34□□□□□ -1.55
PTPRC-202ENST00000367364 SP2Q02086 613 aa5.34□□□□□ -1.55
PTPRC-202ENST00000367364 KRT81Q14533 505 aa5.34□□□□□ -1.55
PTPRC-202ENST00000367364 RAB39AQ14964 217 aa5.34□□□□□ -1.55
PTPRC-202ENST00000367364 CCDC93Q567U6 631 aa5.34□□□□□ -1.55
PTPRC-202ENST00000367364 UBAP2Q5T6F2 1119 aaKnown RBP5.34□□□□□ -1.55
PTPRC-202ENST00000367364 PIP4P1Q86T03 277 aa5.34□□□□□ -1.55
PTPRC-202ENST00000367364 HOMEZQ8IX15 550 aa5.34□□□□□ -1.55
PTPRC-202ENST00000367364 UBR7Q8N806 425 aa5.34□□□□□ -1.55
PTPRC-202ENST00000367364 FAM118BQ9BPY3 351 aa5.34□□□□□ -1.55
PTPRC-202ENST00000367364 HIPK2Q9H2X6 1198 aa5.34□□□□□ -1.55
PTPRC-202ENST00000367364 FOXP1Q9H334 677 aaPredicted RBP5.34□□□□□ -1.55
PTPRC-202ENST00000367364 MDFICQ9P1T7 246 aa5.34□□□□□ -1.55
PTPRC-202ENST00000367364 SH2B3Q9UQQ2 575 aa5.34□□□□□ -1.55
PTPRC-202ENST00000367364 PRSS29PA6NIE9 313 aa5.33□□□□□ -1.56
PTPRC-202ENST00000367364 POC1B-GALNT4F8VUJ3 575 aa5.33□□□□□ -1.56
PTPRC-202ENST00000367364 TCF15Q12870 199 aa5.33□□□□□ -1.56
PTPRC-202ENST00000367364 ZNF628Q5EBL2 1059 aa5.33□□□□□ -1.56
PTPRC-202ENST00000367364 MEX3CQ5U5Q3 659 aaKnown RBP5.33□□□□□ -1.56
PTPRC-202ENST00000367364 KIRREL2Q6UWL6 708 aa5.33□□□□□ -1.56
PTPRC-202ENST00000367364 GALNT4Q8N4A0 578 aa5.33□□□□□ -1.56
PTPRC-202ENST00000367364 CNPPD1Q9BV87 410 aa5.33□□□□□ -1.56
PTPRC-202ENST00000367364 TLR5O60602 858 aa5.32□□□□□ -1.56
PTPRC-202ENST00000367364 PRKD3O94806 890 aa5.32□□□□□ -1.56
PTPRC-202ENST00000367364 TOMM40O96008 361 aa5.32□□□□□ -1.56
PTPRC-202ENST00000367364 ZNF135P52742 658 aaPredicted RBP5.32□□□□□ -1.56
PTPRC-202ENST00000367364 BOP1Q14137 746 aaKnown RBP5.32□□□□□ -1.56
PTPRC-202ENST00000367364 GADL1Q6ZQY3 521 aa5.32□□□□□ -1.56
PTPRC-202ENST00000367364 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.32□□□□□ -1.56
PTPRC-202ENST00000367364 DAZAP1Q96EP5 407 aaKnown RBP5.32□□□□□ -1.56
PTPRC-202ENST00000367364 CAMK1GQ96NX5 476 aa5.32□□□□□ -1.56
PTPRC-202ENST00000367364 BRD9Q9H8M2 597 aa5.32□□□□□ -1.56
PTPRC-202ENST00000367364 GPR35Q9HC97 309 aa5.32□□□□□ -1.56
PTPRC-202ENST00000367364 CALCOCO1Q9P1Z2 691 aa5.32□□□□□ -1.56
PTPRC-202ENST00000367364 TUBD1Q9UJT1 453 aa5.32□□□□□ -1.56
PTPRC-202ENST00000367364 RAD54BQ9Y620 910 aa5.32□□□□□ -1.56
PTPRC-202ENST00000367364 F2RL2O00254 374 aa5.31□□□□□ -1.56
PTPRC-202ENST00000367364 USP1O94782 785 aa5.31□□□□□ -1.56
PTPRC-202ENST00000367364 KIF20AO95235 890 aa5.31□□□□□ -1.56
PTPRC-202ENST00000367364 CHEK2O96017 543 aa5.31□□□□□ -1.56
PTPRC-202ENST00000367364 GJB1P08034 283 aa5.31□□□□□ -1.56
PTPRC-202ENST00000367364 NPSP0C0P6 89 aa5.31□□□□□ -1.56
PTPRC-202ENST00000367364 GCLCP48506 637 aaPredicted RBP5.31□□□□□ -1.56
PTPRC-202ENST00000367364 TMPRSS15P98073 1019 aa5.31□□□□□ -1.56
PTPRC-202ENST00000367364 FAPQ12884 760 aa5.31□□□□□ -1.56
PTPRC-202ENST00000367364 IL10RAQ13651 578 aa5.31□□□□□ -1.56
PTPRC-202ENST00000367364 STAT4Q14765 748 aa5.31□□□□□ -1.56
PTPRC-202ENST00000367364 PPP1R32Q7Z5V6 425 aa5.31□□□□□ -1.56
PTPRC-202ENST00000367364 LRRC71Q8N4P6 559 aa5.31□□□□□ -1.56
PTPRC-202ENST00000367364 CLPTM1LQ96KA5 538 aa5.31□□□□□ -1.56
PTPRC-202ENST00000367364 TRMOQ9BU70 441 aa5.31□□□□□ -1.56
PTPRC-202ENST00000367364 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.31□□□□□ -1.56
PTPRC-202ENST00000367364 MRPL42Q9Y6G3 142 aaKnown RBP5.31□□□□□ -1.56
PTPRC-202ENST00000367364 MYO15BQ96JP2 1530 aa5.31□□□□□ -1.56
PTPRC-202ENST00000367364 BRINP1O60477 761 aa5.3□□□□□ -1.56
PTPRC-202ENST00000367364 FESP07332 822 aa5.3□□□□□ -1.56
PTPRC-202ENST00000367364 CHRM5P08912 532 aaPredicted RBP5.3□□□□□ -1.56
PTPRC-202ENST00000367364 ERVK-21P61565 698 aa5.3□□□□□ -1.56
PTPRC-202ENST00000367364 SRSF1Q07955 248 aaKnown RBP eCLIP5.3□□□□□ -1.56
PTPRC-202ENST00000367364 GTF2H3Q13889 308 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms