RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 ATP23Q9Y6H3 246 aa8.63□□□□□ -1.03
H3F3A-201ENST00000366813 MYO7AQ13402 2215 aa8.63□□□□□ -1.03
H3F3A-201ENST00000366813 ZNFX1Q9P2E3 1918 aaKnown RBP8.62□□□□□ -1.03
H3F3A-201ENST00000366813 SETXQ7Z333 2677 aaKnown RBP8.62□□□□□ -1.03
H3F3A-201ENST00000366813 LINC01553A4QN01 128 aa8.62□□□□□ -1.03
H3F3A-201ENST00000366813 MBTPS2O43462 519 aa8.62□□□□□ -1.03
H3F3A-201ENST00000366813 GAS7O60861 476 aa8.62□□□□□ -1.03
H3F3A-201ENST00000366813 NBPF7P0C2Y1 421 aaPredicted RBP8.62□□□□□ -1.03
H3F3A-201ENST00000366813 IBSPP21815 317 aaPredicted RBP8.62□□□□□ -1.03
H3F3A-201ENST00000366813 PSMC6P62333 389 aa8.62□□□□□ -1.03
H3F3A-201ENST00000366813 SIGLEC14Q08ET2 396 aa8.62□□□□□ -1.03
H3F3A-201ENST00000366813 STRN3Q13033 797 aa8.62□□□□□ -1.03
H3F3A-201ENST00000366813 TWISTNBQ3B726 338 aaPredicted RBP8.62□□□□□ -1.03
H3F3A-201ENST00000366813 PAN2Q504Q3 1202 aaKnown RBP8.62□□□□□ -1.03
H3F3A-201ENST00000366813 KIAA2013Q8IYS2 634 aa8.62□□□□□ -1.03
H3F3A-201ENST00000366813 ANKRD44Q8N8A2 993 aa8.62□□□□□ -1.03
H3F3A-201ENST00000366813 MRPL38Q96DV4 380 aaKnown RBP8.62□□□□□ -1.03
H3F3A-201ENST00000366813 CDK5RAP1Q96SZ6 601 aaKnown RBP8.62□□□□□ -1.03
H3F3A-201ENST00000366813 C17orf80Q9BSJ5 609 aa8.62□□□□□ -1.03
H3F3A-201ENST00000366813 DHX36Q9H2U1 1008 aaKnown RBP8.62□□□□□ -1.03
H3F3A-201ENST00000366813 NOP58Q9Y2X3 529 aaKnown RBP8.62□□□□□ -1.03
H3F3A-201ENST00000366813 SCN5AQ14524 2016 aa8.62□□□□□ -1.03
H3F3A-201ENST00000366813 SIPA1L1O43166 1804 aa8.62□□□□□ -1.03
H3F3A-201ENST00000366813 EYA4O95677 639 aa8.61□□□□□ -1.03
H3F3A-201ENST00000366813 FSHBP01225 129 aa8.61□□□□□ -1.03
H3F3A-201ENST00000366813 ENO2P09104 434 aaPredicted RBP8.61□□□□□ -1.03
H3F3A-201ENST00000366813 FAHP16930 419 aa8.61□□□□□ -1.03
H3F3A-201ENST00000366813 BPIP17213 487 aa8.61□□□□□ -1.03
H3F3A-201ENST00000366813 PTGS1P23219 599 aa8.61□□□□□ -1.03
H3F3A-201ENST00000366813 ADORA1P30542 326 aa8.61□□□□□ -1.03
H3F3A-201ENST00000366813 GLRBP48167 497 aa8.61□□□□□ -1.03
H3F3A-201ENST00000366813 IRF9Q00978 393 aa8.61□□□□□ -1.03
H3F3A-201ENST00000366813 ACVR2BQ13705 512 aa8.61□□□□□ -1.03
H3F3A-201ENST00000366813 ICAM4Q14773 271 aa8.61□□□□□ -1.03
H3F3A-201ENST00000366813 ATP2B3Q16720 1220 aa8.61□□□□□ -1.03
H3F3A-201ENST00000366813 CREB3L3Q68CJ9 461 aa8.61□□□□□ -1.03
H3F3A-201ENST00000366813 SLFN13Q68D06 897 aa8.61□□□□□ -1.03
H3F3A-201ENST00000366813 SPTY2D1Q68D10 685 aaPredicted RBP8.61□□□□□ -1.03
H3F3A-201ENST00000366813 TRMT13Q9NUP7 481 aaKnown RBP8.61□□□□□ -1.03
H3F3A-201ENST00000366813 SAP30BPQ9UHR5 308 aaKnown RBP8.61□□□□□ -1.03
H3F3A-201ENST00000366813 ATP8A1Q9Y2Q0 1164 aa8.61□□□□□ -1.03
H3F3A-201ENST00000366813 FAM208BQ5VWN6 2430 aa8.61□□□□□ -1.03
H3F3A-201ENST00000366813 FAM90A27PA6NNH2 459 aa8.6□□□□□ -1.03
H3F3A-201ENST00000366813 EYA2O00167 538 aa8.6□□□□□ -1.03
H3F3A-201ENST00000366813 SCDO00767 359 aa8.6□□□□□ -1.03
H3F3A-201ENST00000366813 WDR5P61964 334 aaKnown RBP8.6□□□□□ -1.03
H3F3A-201ENST00000366813 DEFB103AP81534 67 aa8.6□□□□□ -1.03
H3F3A-201ENST00000366813 CALD1Q05682 793 aaKnown RBP8.6□□□□□ -1.03
H3F3A-201ENST00000366813 TMEM132BQ14DG7 1078 aa8.6□□□□□ -1.03
H3F3A-201ENST00000366813 SART3Q15020 963 aaKnown RBP8.6□□□□□ -1.03
H3F3A-201ENST00000366813 RABL6Q3YEC7 729 aaPredicted RBP8.6□□□□□ -1.03
H3F3A-201ENST00000366813 RPAINQ86UA6 219 aa8.6□□□□□ -1.03
H3F3A-201ENST00000366813 PROSER1Q86XN7 944 aa8.6□□□□□ -1.03
H3F3A-201ENST00000366813 DDX42Q86XP3 938 aaKnown RBP eCLIP8.6□□□□□ -1.031e-6■■■□□ 17.3
H3F3A-201ENST00000366813 DTX3Q8N9I9 347 aa8.6□□□□□ -1.03
H3F3A-201ENST00000366813 NUDT10Q8NFP7 164 aa8.6□□□□□ -1.03
H3F3A-201ENST00000366813 TGFBRAP1Q8WUH2 860 aa8.6□□□□□ -1.03
H3F3A-201ENST00000366813 NUDT11Q96G61 164 aa8.6□□□□□ -1.03
H3F3A-201ENST00000366813 KLC2Q9H0B6 622 aa8.6□□□□□ -1.03
H3F3A-201ENST00000366813 ALDH8A1Q9H2A2 487 aaPredicted RBP8.6□□□□□ -1.03
H3F3A-201ENST00000366813 THG1LQ9NWX6 298 aaKnown RBP8.6□□□□□ -1.03
H3F3A-201ENST00000366813 ARHGAP20Q9P2F6 1191 aa8.6□□□□□ -1.03
H3F3A-201ENST00000366813 TET1Q8NFU7 2136 aa8.6□□□□□ -1.03
H3F3A-201ENST00000366813 hCG_2014768A0A024R1R8 64 aa8.59□□□□□ -1.03
H3F3A-201ENST00000366813 GPR42O15529 346 aa8.59□□□□□ -1.03
H3F3A-201ENST00000366813 MAP4K4O95819 1239 aaPredicted RBP8.59□□□□□ -1.03
H3F3A-201ENST00000366813 LDHCP07864 332 aa8.59□□□□□ -1.03
H3F3A-201ENST00000366813 CPEP16870 476 aa8.59□□□□□ -1.03
H3F3A-201ENST00000366813 PTPN1P18031 435 aaKnown RBP8.59□□□□□ -1.03
H3F3A-201ENST00000366813 GJA4P35212 333 aa8.59□□□□□ -1.03
H3F3A-201ENST00000366813 SEC23AQ15436 765 aa8.59□□□□□ -1.03
H3F3A-201ENST00000366813 SKIDA1Q1XH10 827 aa8.59□□□□□ -1.03
H3F3A-201ENST00000366813 KIAA1755Q5JYT7 1200 aa8.59□□□□□ -1.03
H3F3A-201ENST00000366813 BTBD8Q5XKL5 378 aa8.59□□□□□ -1.03
H3F3A-201ENST00000366813 ZNF585AQ6P3V2 769 aa8.59□□□□□ -1.03
H3F3A-201ENST00000366813 SLC4A10Q6U841 1118 aa8.59□□□□□ -1.03
H3F3A-201ENST00000366813 ATG9AQ7Z3C6 839 aa8.59□□□□□ -1.03
H3F3A-201ENST00000366813 MB21D1Q8N884 522 aa8.59□□□□□ -1.03
H3F3A-201ENST00000366813 CHTF18Q8WVB6 975 aa8.59□□□□□ -1.03
H3F3A-201ENST00000366813 DLG3Q92796 817 aa8.59□□□□□ -1.03
H3F3A-201ENST00000366813 USP7Q93009 1102 aa8.59□□□□□ -1.03
H3F3A-201ENST00000366813 NSUN4Q96CB9 384 aaKnown RBP8.59□□□□□ -1.03
H3F3A-201ENST00000366813 RAD9AQ99638 391 aa8.59□□□□□ -1.03
H3F3A-201ENST00000366813 IFT22Q9H7X7 185 aa8.59□□□□□ -1.03
H3F3A-201ENST00000366813 OXSMQ9NWU1 459 aa8.59□□□□□ -1.03
H3F3A-201ENST00000366813 DLL3Q9NYJ7 618 aa8.59□□□□□ -1.03
H3F3A-201ENST00000366813 CTNNA3Q9UI47 895 aa8.59□□□□□ -1.03
H3F3A-201ENST00000366813 ADAM29Q9UKF5 820 aa8.59□□□□□ -1.03
H3F3A-201ENST00000366813 TSC22D4Q9Y3Q8 395 aa8.59□□□□□ -1.03
H3F3A-201ENST00000366813 B3GALT1Q9Y5Z6 326 aa8.59□□□□□ -1.03
H3F3A-201ENST00000366813 ASTN1O14525 1302 aa8.59□□□□□ -1.03
H3F3A-201ENST00000366813 FLT1P17948 1338 aa8.58□□□□□ -1.04
H3F3A-201ENST00000366813 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.58□□□□□ -1.04
H3F3A-201ENST00000366813 A0A1W2PRG0 241 aa8.58□□□□□ -1.04
H3F3A-201ENST00000366813 NEMP1O14524 444 aa8.58□□□□□ -1.04
H3F3A-201ENST00000366813 DVL2O14641 736 aa8.58□□□□□ -1.04
H3F3A-201ENST00000366813 APAF1O14727 1248 aa8.58□□□□□ -1.04
H3F3A-201ENST00000366813 AKAP8O43823 692 aaKnown RBP8.58□□□□□ -1.04
H3F3A-201ENST00000366813 ZEB2O60315 1214 aa8.58□□□□□ -1.04
H3F3A-201ENST00000366813 CABYRO75952 493 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms