RNA–Protein interactions for RNA: ENST00000366739.5

MRPL55-212, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-212ENST00000366739 ZNF252P-AS1Q0IIN9 211 aa12.35□□□□□ -0.43
MRPL55-212ENST00000366739 FOXC1Q12948 553 aa12.35□□□□□ -0.43
MRPL55-212ENST00000366739 DMC1Q14565 340 aa12.35□□□□□ -0.43
MRPL55-212ENST00000366739 TMEM119Q4V9L6 283 aa12.35□□□□□ -0.43
MRPL55-212ENST00000366739 SDHAF4Q5VUM1 108 aa12.35□□□□□ -0.43
MRPL55-212ENST00000366739 CC2D1AQ6P1N0 951 aaPredicted RBP12.35□□□□□ -0.43
MRPL55-212ENST00000366739 SYT13Q7L8C5 426 aa12.35□□□□□ -0.43
MRPL55-212ENST00000366739 CD302Q8IX05 232 aa12.35□□□□□ -0.43
MRPL55-212ENST00000366739 THEM5Q8N1Q8 247 aa12.35□□□□□ -0.43
MRPL55-212ENST00000366739 SPPL2BQ8TCT7 592 aa12.35□□□□□ -0.43
MRPL55-212ENST00000366739 C2orf15Q8WU43 125 aaKnown RBP12.35□□□□□ -0.43
MRPL55-212ENST00000366739 MRPS31Q92665 395 aaKnown RBP12.35□□□□□ -0.43
MRPL55-212ENST00000366739 KCNN1Q92952 543 aa12.35□□□□□ -0.43
MRPL55-212ENST00000366739 REEP2Q9BRK0 252 aa12.35□□□□□ -0.43
MRPL55-212ENST00000366739 KIF9Q9HAQ2 790 aa12.35□□□□□ -0.43
MRPL55-212ENST00000366739 SH2B1Q9NRF2 756 aaPredicted RBP12.35□□□□□ -0.43
MRPL55-212ENST00000366739 TMLHEQ9NVH6 421 aa12.35□□□□□ -0.43
MRPL55-212ENST00000366739 KCND2Q9NZV8 630 aa12.35□□□□□ -0.43
MRPL55-212ENST00000366739 MAGED2Q9UNF1 606 aaPredicted RBP12.35□□□□□ -0.43
MRPL55-212ENST00000366739 INVSQ9Y283 1065 aa12.35□□□□□ -0.43
MRPL55-212ENST00000366739 SPEGQ15772 3267 aa12.35□□□□□ -0.43
MRPL55-212ENST00000366739 IGF2RP11717 2491 aa12.34□□□□□ -0.43
MRPL55-212ENST00000366739 BAHCC1Q9P281 2608 aa12.34□□□□□ -0.43
MRPL55-212ENST00000366739 LNP1A1A4G5 178 aa12.34□□□□□ -0.43
MRPL55-212ENST00000366739 TADA3O75528 432 aa12.34□□□□□ -0.43
MRPL55-212ENST00000366739 TOP3BO95985 862 aaKnown RBP12.34□□□□□ -0.43
MRPL55-212ENST00000366739 GBP1P32455 592 aa12.34□□□□□ -0.43
MRPL55-212ENST00000366739 ACOT2P49753 483 aa12.34□□□□□ -0.43
MRPL55-212ENST00000366739 TAF6P49848 677 aa12.34□□□□□ -0.43
MRPL55-212ENST00000366739 ATP2C1P98194 919 aaPredicted RBP12.34□□□□□ -0.43
MRPL55-212ENST00000366739 SMARCB1Q12824 385 aa12.34□□□□□ -0.43
MRPL55-212ENST00000366739 COL9A2Q14055 689 aaPredicted RBP12.34□□□□□ -0.43
MRPL55-212ENST00000366739 ZNF268Q14587 947 aaPredicted RBP12.34□□□□□ -0.43
MRPL55-212ENST00000366739 MTF1Q14872 753 aa12.34□□□□□ -0.43
MRPL55-212ENST00000366739 KARSQ15046 597 aaKnown RBP12.34□□□□□ -0.43
MRPL55-212ENST00000366739 PDGFRLQ15198 375 aa12.34□□□□□ -0.43
MRPL55-212ENST00000366739 FBXO43Q4G163 708 aa12.34□□□□□ -0.43
MRPL55-212ENST00000366739 SH3PXD2AQ5TCZ1 1133 aa12.34□□□□□ -0.43
MRPL55-212ENST00000366739 MON1AQ86VX9 555 aa12.34□□□□□ -0.43
MRPL55-212ENST00000366739 CPA6Q8N4T0 437 aa12.34□□□□□ -0.43
MRPL55-212ENST00000366739 TTC16Q8NEE8 873 aa12.34□□□□□ -0.43
MRPL55-212ENST00000366739 LRRC15Q8TF66 581 aa12.34□□□□□ -0.43
MRPL55-212ENST00000366739 CDK5RAP3Q96JB5 506 aa12.34□□□□□ -0.43
MRPL55-212ENST00000366739 PI4K2AQ9BTU6 479 aa12.34□□□□□ -0.43
MRPL55-212ENST00000366739 ECT2Q9H8V3 914 aa12.34□□□□□ -0.43
MRPL55-212ENST00000366739 DPP3Q9NY33 737 aa12.34□□□□□ -0.43
MRPL55-212ENST00000366739 EBF1Q9UH73 591 aa12.34□□□□□ -0.43
MRPL55-212ENST00000366739 ODF2LQ9ULJ1 636 aa12.34□□□□□ -0.43
MRPL55-212ENST00000366739 WASF3Q9UPY6 502 aa12.34□□□□□ -0.43
MRPL55-212ENST00000366739 DERAQ9Y315 318 aa12.34□□□□□ -0.43
MRPL55-212ENST00000366739 PCDHB5Q9Y5E4 795 aa12.34□□□□□ -0.43
MRPL55-212ENST00000366739 WNT6Q9Y6F9 365 aa12.34□□□□□ -0.43
MRPL55-212ENST00000366739 ATRXP46100 2492 aa12.34□□□□□ -0.43
MRPL55-212ENST00000366739 MYH11P35749 1972 aa12.34□□□□□ -0.43
MRPL55-212ENST00000366739 ANK1P16157 1881 aa12.34□□□□□ -0.43
MRPL55-212ENST00000366739 VWA3AA6NCI4 1184 aa12.33□□□□□ -0.44
MRPL55-212ENST00000366739 TISP43B9A030 160 aa12.33□□□□□ -0.44
MRPL55-212ENST00000366739 ANKRD63C9JTQ0 380 aa12.33□□□□□ -0.44
MRPL55-212ENST00000366739 PRPF40AO75400 957 aaKnown RBP12.33□□□□□ -0.44
MRPL55-212ENST00000366739 FAM13AO94988 1023 aa12.33□□□□□ -0.44
MRPL55-212ENST00000366739 HOXB3P14651 431 aaPredicted RBP12.33□□□□□ -0.44
MRPL55-212ENST00000366739 DGKEP52429 567 aa12.33□□□□□ -0.44
MRPL55-212ENST00000366739 PSMD2Q13200 908 aa12.33□□□□□ -0.44
MRPL55-212ENST00000366739 DHX8Q14562 1220 aaKnown RBP12.33□□□□□ -0.44
MRPL55-212ENST00000366739 DAB2IPQ5VWQ8 1189 aa12.33□□□□□ -0.44
MRPL55-212ENST00000366739 GPBP1Q86WP2 473 aa12.33□□□□□ -0.44
MRPL55-212ENST00000366739 DCP1BQ8IZD4 617 aaKnown RBP12.33□□□□□ -0.44
MRPL55-212ENST00000366739 KCTD17Q8N5Z5 321 aa12.33□□□□□ -0.44
MRPL55-212ENST00000366739 MYCT1Q8N699 235 aa12.33□□□□□ -0.44
MRPL55-212ENST00000366739 KDF1Q8NAX2 398 aaPredicted RBP12.33□□□□□ -0.44
MRPL55-212ENST00000366739 CD101Q93033 1021 aa12.33□□□□□ -0.44
MRPL55-212ENST00000366739 ACDQ96AP0 544 aa12.33□□□□□ -0.44
MRPL55-212ENST00000366739 SLC22A12Q96S37 553 aa12.33□□□□□ -0.44
MRPL55-212ENST00000366739 TMEM121BQ9BXQ6 578 aaPredicted RBP12.33□□□□□ -0.44
MRPL55-212ENST00000366739 TPSD1Q9BZJ3 242 aa12.33□□□□□ -0.44
MRPL55-212ENST00000366739 ASB7Q9H672 318 aa12.33□□□□□ -0.44
MRPL55-212ENST00000366739 TRPC7Q9HCX4 862 aa12.33□□□□□ -0.44
MRPL55-212ENST00000366739 DUS2Q9NX74 493 aaKnown RBP12.33□□□□□ -0.44
MRPL55-212ENST00000366739 C2CD2Q9Y426 696 aa12.33□□□□□ -0.44
MRPL55-212ENST00000366739 SCN1AP35498 2009 aa12.33□□□□□ -0.44
MRPL55-212ENST00000366739 ASPMQ8IZT6 3477 aa12.33□□□□□ -0.44
MRPL55-212ENST00000366739 ZFYVE26Q68DK2 2539 aa12.33□□□□□ -0.44
MRPL55-212ENST00000366739 SOBPA7XYQ1 873 aa12.32□□□□□ -0.44
MRPL55-212ENST00000366739 PATE3B3GLJ2 98 aa12.32□□□□□ -0.44
MRPL55-212ENST00000366739 TRAK2O60296 914 aa12.32□□□□□ -0.44
MRPL55-212ENST00000366739 CSH1P0DML2 217 aa12.32□□□□□ -0.44
MRPL55-212ENST00000366739 CSH2P0DML3 217 aa12.32□□□□□ -0.44
MRPL55-212ENST00000366739 BCKDHBP21953 392 aa12.32□□□□□ -0.44
MRPL55-212ENST00000366739 ZNF131P52739 623 aa12.32□□□□□ -0.44
MRPL55-212ENST00000366739 TSPY1Q01534 308 aa12.32□□□□□ -0.44
MRPL55-212ENST00000366739 FAM160A1Q05DH4 1040 aa12.32□□□□□ -0.44
MRPL55-212ENST00000366739 ZNF77Q15935 545 aa12.32□□□□□ -0.44
MRPL55-212ENST00000366739 DDR2Q16832 855 aa12.32□□□□□ -0.44
MRPL55-212ENST00000366739 EML3Q32P44 896 aa12.32□□□□□ -0.44
MRPL55-212ENST00000366739 PMS2CLQ68D20 193 aa12.32□□□□□ -0.44
MRPL55-212ENST00000366739 EFCAB13Q8IY85 973 aa12.32□□□□□ -0.44
MRPL55-212ENST00000366739 TSTD1Q8NFU3 115 aa12.32□□□□□ -0.44
MRPL55-212ENST00000366739 OSCP1Q8WVF1 389 aa12.32□□□□□ -0.44
MRPL55-212ENST00000366739 EXOC4Q96A65 974 aa12.32□□□□□ -0.44
MRPL55-212ENST00000366739 FIZ1Q96SL8 496 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms