RNA–Protein interactions for RNA: ENST00000366699.3

TRIM11-202, Transcript of tripartite motif containing 11, humanhuman

TSL 2 BASIC

Gene TRIM11, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-202ENST00000366699 CLCN3P51790 818 aa18.41■□□□□ 0.54
TRIM11-202ENST00000366699 MKRN3Q13064 507 aaKnown RBP18.41■□□□□ 0.54
TRIM11-202ENST00000366699 ATP13A4Q4VNC1 1196 aa18.41■□□□□ 0.54
TRIM11-202ENST00000366699 PPP1R15BQ5SWA1 713 aa18.41■□□□□ 0.54
TRIM11-202ENST00000366699 ANKRD42Q8N9B4 389 aa18.41■□□□□ 0.54
TRIM11-202ENST00000366699 UPF1Q92900 1129 aaKnown RBP eCLIP18.41■□□□□ 0.54
TRIM11-202ENST00000366699 R3HDMLQ9H3Y0 253 aa18.41■□□□□ 0.54
TRIM11-202ENST00000366699 NKIRAS1Q9NYS0 192 aa18.41■□□□□ 0.54
TRIM11-202ENST00000366699 WDR35Q9P2L0 1181 aa18.41■□□□□ 0.54
TRIM11-202ENST00000366699 DNPEPQ9ULA0 475 aa18.41■□□□□ 0.54
TRIM11-202ENST00000366699 IVNS1ABPQ9Y6Y0 642 aa18.41■□□□□ 0.54
TRIM11-202ENST00000366699 PI4K2BG5E9Z4 385 aa18.4■□□□□ 0.54
TRIM11-202ENST00000366699 DNALI1O14645 258 aaPredicted RBP18.4■□□□□ 0.54
TRIM11-202ENST00000366699 B4GALT5O43286 388 aa18.4■□□□□ 0.54
TRIM11-202ENST00000366699 SUN1O94901 812 aa18.4■□□□□ 0.54
TRIM11-202ENST00000366699 MCF2P10911 925 aa18.4■□□□□ 0.54
TRIM11-202ENST00000366699 KRT10P13645 584 aa18.4■□□□□ 0.54
TRIM11-202ENST00000366699 P4HA1P13674 534 aa18.4■□□□□ 0.54
TRIM11-202ENST00000366699 CD19P15391 556 aa18.4■□□□□ 0.54
TRIM11-202ENST00000366699 FAM187BQ17R55 369 aa18.4■□□□□ 0.54
TRIM11-202ENST00000366699 TFDP3Q5H9I0 405 aa18.4■□□□□ 0.54
TRIM11-202ENST00000366699 SCARA3Q6AZY7 606 aa18.4■□□□□ 0.54
TRIM11-202ENST00000366699 MFSD7Q6UXD7 560 aa18.4■□□□□ 0.54
TRIM11-202ENST00000366699 POLNQ7Z5Q5 900 aa18.4■□□□□ 0.54
TRIM11-202ENST00000366699 PARP9Q8IXQ6 854 aa18.4■□□□□ 0.54
TRIM11-202ENST00000366699 TTC25Q96NG3 672 aa18.4■□□□□ 0.54
TRIM11-202ENST00000366699 PLCD4Q9BRC7 762 aa18.4■□□□□ 0.54
TRIM11-202ENST00000366699 FGFR1OP2Q9NVK5 253 aa18.4■□□□□ 0.54
TRIM11-202ENST00000366699 KLHL11Q9NVR0 708 aa18.4■□□□□ 0.54
TRIM11-202ENST00000366699 PNMA3Q9UL41 463 aa18.4■□□□□ 0.54
TRIM11-202ENST00000366699 PAPPA2Q9BXP8 1791 aa18.4■□□□□ 0.54
TRIM11-202ENST00000366699 F8VP50 259 aa18.4■□□□□ 0.54
TRIM11-202ENST00000366699 ATICP31939 592 aa18.4■□□□□ 0.54
TRIM11-202ENST00000366699 NUGGCQ68CJ6 796 aa18.4■□□□□ 0.54
TRIM11-202ENST00000366699 SPOCD1Q6ZMY3 1216 aa18.4■□□□□ 0.54
TRIM11-202ENST00000366699 CYP4X1Q8N118 509 aa18.4■□□□□ 0.54
TRIM11-202ENST00000366699 WDTC1Q8N5D0 677 aa18.4■□□□□ 0.54
TRIM11-202ENST00000366699 ALLCQ8N6M5 410 aa18.4■□□□□ 0.54
TRIM11-202ENST00000366699 ZC3H15Q8WU90 426 aaKnown RBP18.4■□□□□ 0.54
TRIM11-202ENST00000366699 TFAP2BQ92481 460 aa18.4■□□□□ 0.54
TRIM11-202ENST00000366699 COPS5Q92905 334 aa18.4■□□□□ 0.54
TRIM11-202ENST00000366699 TBK1Q9UHD2 729 aa18.4■□□□□ 0.54
TRIM11-202ENST00000366699 LRRC37A2A6NM11 1700 aa18.39■□□□□ 0.53
TRIM11-202ENST00000366699 DICER1Q9UPY3 1922 aaKnown RBP18.39■□□□□ 0.53
TRIM11-202ENST00000366699 C22orf31O95567 290 aa18.39■□□□□ 0.53
TRIM11-202ENST00000366699 CXCL8P10145 99 aa18.39■□□□□ 0.53
TRIM11-202ENST00000366699 ZNF252P-AS1Q0IIN9 211 aa18.39■□□□□ 0.53
TRIM11-202ENST00000366699 NR1H3Q13133 447 aa18.39■□□□□ 0.53
TRIM11-202ENST00000366699 HADHQ16836 314 aaKnown RBP18.39■□□□□ 0.53
TRIM11-202ENST00000366699 WDR72Q3MJ13 1102 aa18.39■□□□□ 0.53
TRIM11-202ENST00000366699 EEF1DP3Q658K8 133 aa18.39■□□□□ 0.53
TRIM11-202ENST00000366699 PPP1R21Q6ZMI0 780 aa18.39■□□□□ 0.53
TRIM11-202ENST00000366699 USP50Q70EL3 339 aaPredicted RBP18.39■□□□□ 0.53
TRIM11-202ENST00000366699 BCO2Q9BYV7 579 aa18.39■□□□□ 0.53
TRIM11-202ENST00000366699 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.39■□□□□ 0.531e-6■■□□□ 11.6
TRIM11-202ENST00000366699 POLR2AP24928 1970 aaKnown RBP18.39■□□□□ 0.53
TRIM11-202ENST00000366699 SIGLEC16A6NMB1 481 aa18.39■□□□□ 0.53
TRIM11-202ENST00000366699 KRT7P08729 469 aa18.39■□□□□ 0.53
TRIM11-202ENST00000366699 KRT3P12035 628 aa18.39■□□□□ 0.53
TRIM11-202ENST00000366699 STX2P32856 288 aa18.39■□□□□ 0.53
TRIM11-202ENST00000366699 MOGSQ13724 837 aa18.39■□□□□ 0.53
TRIM11-202ENST00000366699 SNCBQ16143 134 aa18.39■□□□□ 0.53
TRIM11-202ENST00000366699 SRRM1Q8IYB3 904 aaKnown RBP18.39■□□□□ 0.53
TRIM11-202ENST00000366699 GBP7Q8N8V2 638 aaPredicted RBP18.39■□□□□ 0.53
TRIM11-202ENST00000366699 ASB7Q9H672 318 aa18.39■□□□□ 0.53
TRIM11-202ENST00000366699 EURLQ9NYK6 297 aa18.39■□□□□ 0.53
TRIM11-202ENST00000366699 TPX2Q9ULW0 747 aaKnown RBP18.39■□□□□ 0.53
TRIM11-202ENST00000366699 GJB1P08034 283 aa18.38■□□□□ 0.53
TRIM11-202ENST00000366699 CETPP11597 493 aa18.38■□□□□ 0.53
TRIM11-202ENST00000366699 TCF4P15884 667 aa18.38■□□□□ 0.53
TRIM11-202ENST00000366699 ARSEP51690 589 aa18.38■□□□□ 0.53
TRIM11-202ENST00000366699 CCNA1P78396 465 aa18.38■□□□□ 0.53
TRIM11-202ENST00000366699 SF3A3Q12874 501 aaKnown RBP eCLIP18.38■□□□□ 0.534e-6■■□□□ 11.7
TRIM11-202ENST00000366699 SNAPC2Q13487 334 aa18.38■□□□□ 0.53
TRIM11-202ENST00000366699 MPP2Q14168 576 aa18.38■□□□□ 0.53
TRIM11-202ENST00000366699 CYP4F22Q6NT55 531 aa18.38■□□□□ 0.53
TRIM11-202ENST00000366699 PRUNE1Q86TP1 453 aa18.38■□□□□ 0.53
TRIM11-202ENST00000366699 FNIP1Q8TF40 1166 aa18.38■□□□□ 0.53
TRIM11-202ENST00000366699 ZNF668Q96K58 619 aaPredicted RBP18.38■□□□□ 0.53
TRIM11-202ENST00000366699 MAGEB18Q96M61 343 aa18.38■□□□□ 0.53
TRIM11-202ENST00000366699 FRMD8P1Q9BZ68 369 aaPredicted RBP18.38■□□□□ 0.53
TRIM11-202ENST00000366699 FHDC1Q9C0D6 1143 aaPredicted RBP18.38■□□□□ 0.53
TRIM11-202ENST00000366699 SYNCQ9H7C4 482 aa18.38■□□□□ 0.53
TRIM11-202ENST00000366699 CYP3A43Q9HB55 503 aa18.38■□□□□ 0.53
TRIM11-202ENST00000366699 SAYSD1Q9NPB0 183 aa18.38■□□□□ 0.53
TRIM11-202ENST00000366699 EFR3BQ9Y2G0 817 aa18.38■□□□□ 0.53
TRIM11-202ENST00000366699 OTOFQ9HC10 1997 aa18.38■□□□□ 0.53
TRIM11-202ENST00000366699 STAG3L1P0CL83 205 aa18.38■□□□□ 0.53
TRIM11-202ENST00000366699 PSMA2P25787 234 aa18.38■□□□□ 0.53
TRIM11-202ENST00000366699 IGBP1P78318 339 aa18.38■□□□□ 0.53
TRIM11-202ENST00000366699 MORF4L2Q15014 288 aa18.38■□□□□ 0.53
TRIM11-202ENST00000366699 DENND1BQ6P3S1 775 aa18.38■□□□□ 0.53
TRIM11-202ENST00000366699 MOB2Q70IA6 237 aa18.38■□□□□ 0.53
TRIM11-202ENST00000366699 ARMCX2Q7L311 632 aa18.38■□□□□ 0.53
TRIM11-202ENST00000366699 IFNLR1Q8IU57 520 aaPredicted RBP18.38■□□□□ 0.53
TRIM11-202ENST00000366699 CEP120Q8N960 986 aa18.38■□□□□ 0.53
TRIM11-202ENST00000366699 RNPEPQ9H4A4 650 aa18.38■□□□□ 0.53
TRIM11-202ENST00000366699 PDGFCQ9NRA1 345 aa18.38■□□□□ 0.53
TRIM11-202ENST00000366699 hCG_1818297A0A087WSY0 165 aa18.37■□□□□ 0.53
TRIM11-202ENST00000366699 LRRD1A4D1F6 860 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms